RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 POSTNQ15063 836 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 ZNF365Q70YC5 407 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 SNRKQ9NRH2 765 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 YTHDC2Q9H6S0 1430 aaKnown RBP8.51□□□□□ -1.05
SF3B3-201ENST00000302516 RAPGEF1Q13905 1077 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 HSP90AA4PQ58FG1 418 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 XAGE3Q8WTP9 111 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 WWC3Q9ULE0 1092 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 CRCPO75575 148 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 CBX8Q9HC52 389 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 AGTPBP1Q9UPW5 1226 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 FAN1Q9Y2M0 1017 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 TBC1D8BQ0IIM8 1120 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 RNF168Q8IYW5 571 aaPredicted RBP8.5□□□□□ -1.05
SF3B3-201ENST00000302516 ATP2A3Q93084 1043 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 SERPINA10Q9UK55 444 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 AMOTL2Q9Y2J4 779 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 RGS12O14924 1447 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 VWA3AA6NCI4 1184 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 MYCBPQ99417 103 aaPredicted RBP8.5□□□□□ -1.05
SF3B3-201ENST00000302516 ZNF202O95125 648 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 CCT6BQ92526 530 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 ZKSCAN3Q9BRR0 538 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 SMIM23A6NLE4 172 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 EVI5O60447 810 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 BCRP11274 1271 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 SLC8A3P57103 927 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 LEO1Q8WVC0 666 aaPredicted RBP8.5□□□□□ -1.05
SF3B3-201ENST00000302516 THEGQ9P2T0 379 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 E7EVH7 732 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 C6orf229H3BNL8 230 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 EXOC5O00471 708 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 MAGEB6Q8N7X4 407 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 TRIML1Q8N9V2 468 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 KDM3AQ9Y4C1 1321 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 NUTM2BA6NNL0 878 aaPredicted RBP8.5□□□□□ -1.05
SF3B3-201ENST00000302516 NUTM2EB1AL46 878 aaPredicted RBP8.5□□□□□ -1.05
SF3B3-201ENST00000302516 DCAF17Q5H9S7 520 aaPredicted RBP8.5□□□□□ -1.05
SF3B3-201ENST00000302516 CDAN1Q8IWY9 1227 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 IFIH1Q9BYX4 1025 aaKnown RBP8.5□□□□□ -1.05
SF3B3-201ENST00000302516 SLC27A2O14975 620 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 PHBP35232 272 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 PHLDB3Q6NSJ2 640 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 GRK7Q8WTQ7 553 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 KCNG1Q9UIX4 513 aa8.5□□□□□ -1.05
SF3B3-201ENST00000302516 ATP5J2-PTCD1G3V325 749 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 TRAF5O00463 557 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 HOXA7P31268 230 aaPredicted RBP8.49□□□□□ -1.05
SF3B3-201ENST00000302516 SFMBT2Q5VUG0 894 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 STMN1P16949 149 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 RGS22Q8NE09 1264 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 GBP5Q96PP8 586 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 DKC1O60832 514 aaKnown RBP eCLIP8.49□□□□□ -1.052e-23■■■■■ 58.3
SF3B3-201ENST00000302516 KIAA0232Q92628 1395 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 MAGEF1Q9HAY2 307 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 LARSQ9P2J5 1176 aaKnown RBP8.49□□□□□ -1.05
SF3B3-201ENST00000302516 MYO1AQ9UBC5 1043 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 CDC42BPBQ9Y5S2 1711 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 A0A1W2PP64 1363 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 PCDH11XQ9BZA7 1347 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 PCDH11YQ9BZA8 1340 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 A0A1B0GVL5 298 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 CABS1Q96KC9 395 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 TM6SF1Q9BZW5 370 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 SAR1BQ9Y6B6 198 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 GPTP24298 496 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 RNF40O75150 1001 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 ZSCAN26Q16670 478 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 CSGALNACT2Q8N6G5 542 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 TNNI2P48788 182 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 ARMC9Q7Z3E5 817 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 FAM204AQ9H8W3 233 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 TLDC2A0PJX2 215 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 HHATQ5VTY9 493 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 TMEM87AQ8NBN3 555 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 MRFAP1L1Q96HT8 127 aa8.49□□□□□ -1.05
SF3B3-201ENST00000302516 TNFAIP3P21580 790 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 GJC1P36383 396 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 KRT25Q7Z3Z0 450 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 ARHGEF2Q92974 986 aaKnown RBP8.48□□□□□ -1.05
SF3B3-201ENST00000302516 SBNO1A3KN83 1393 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 GOLGA8QA0A0J9YX86 632 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 GOLGA8OA6NCC3 632 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 GOLGA8NF8WBI6 632 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 VAMP4O75379 141 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 HSPA1LP34931 641 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 HVCN1Q96D96 273 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 HOMER3Q9NSC5 361 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 YWHAEP62258 255 aaKnown RBP8.48□□□□□ -1.05
SF3B3-201ENST00000302516 EPSTI1Q96J88 318 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 TYW1Q9NV66 732 aaKnown RBP8.48□□□□□ -1.05
SF3B3-201ENST00000302516 DENND2AQ9ULE3 1009 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 REREQ9P2R6 1566 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 ZNF131P52739 623 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 STX17P56962 302 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 RPS6KA1Q15418 735 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 C8orf58Q8NAV2 365 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 RNF123Q5XPI4 1314 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 LMBRD1Q9NUN5 540 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 PPP1R1BQ9UD71 204 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms