RNA–Protein interactions for RNA: ENST00000298552.7

TSC1-201, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-201ENST00000298552 EXOC7Q9UPT5 735 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 PRG3Q9Y2Y8 225 aaPredicted RBP8.3□□□□□ -1.08
TSC1-201ENST00000298552 RNF40O75150 1001 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 RIPK4P57078 832 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 CCHCR1Q8TD31 782 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 TSKSQ9UJT2 592 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 TPX2Q9ULW0 747 aaKnown RBP8.3□□□□□ -1.08
TSC1-201ENST00000298552 RGS5O15539 181 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 BRD1O95696 1058 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 CCDC159P0C7I6 412 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 SRGAP2BP0DMP2 458 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 SERPINB10P48595 397 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 PTK2BQ14289 1009 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 TADA1Q96BN2 335 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 TRIM4Q9C037 500 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 PDRG1Q9NUG6 133 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 CHCHD3Q9NX63 227 aaKnown RBP8.3□□□□□ -1.08
TSC1-201ENST00000298552 GSTA1P08263 222 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 GSTA2P09210 222 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 MCF2P10911 925 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 ATICP31939 592 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 KIF9Q9HAQ2 790 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 NLRP2Q9NX02 1062 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 LMCD1Q9NZU5 365 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 ANAPC5Q9UJX4 755 aa8.3□□□□□ -1.08
TSC1-201ENST00000298552 HDAC4P56524 1084 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 CYTH1Q15438 398 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 ST13P4Q8IZP2 240 aaPredicted RBP8.29□□□□□ -1.08
TSC1-201ENST00000298552 SLC5A1P13866 664 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 MX2P20592 715 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 MCTP2Q6DN12 878 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 SPDYE1Q8NFV5 336 aaPredicted RBP8.29□□□□□ -1.08
TSC1-201ENST00000298552 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.29□□□□□ -1.087e-8■■■□□ 15.6
TSC1-201ENST00000298552 NUP85Q9BW27 656 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 DHX29Q7Z478 1369 aaKnown RBP8.29□□□□□ -1.08
TSC1-201ENST00000298552 A0A1B0GVL5 298 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 STX3Q13277 289 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 DYNC1I2Q13409 638 aaKnown RBP8.29□□□□□ -1.08
TSC1-201ENST00000298552 FSIP1Q8NA03 581 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 RMDN2Q96LZ7 410 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 INTS13Q9NVM9 706 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 ASXL3Q9C0F0 2248 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 EEF1DP29692 281 aaKnown RBP8.29□□□□□ -1.08
TSC1-201ENST00000298552 TRIM47Q96LD4 638 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 EPAS1Q99814 870 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 NHEJ1Q9H9Q4 299 aaPredicted RBP8.29□□□□□ -1.08
TSC1-201ENST00000298552 IRAK4Q9NWZ3 460 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 TTC3P53804 2025 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 SPTBP11277 2137 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 TADA2BQ86TJ2 420 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 SYCE1Q8N0S2 351 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 SIX6OS1Q8N1H7 587 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 MRPL40Q9NQ50 206 aaKnown RBP8.29□□□□□ -1.08
TSC1-201ENST00000298552 MBD2Q9UBB5 411 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 CFAP221Q4G0U5 840 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 OGFOD1Q8N543 542 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 GIPC2Q8TF65 315 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 GTF3C6Q969F1 213 aa8.29□□□□□ -1.08
TSC1-201ENST00000298552 TRIM6Q9C030 488 aaPredicted RBP8.29□□□□□ -1.08
TSC1-201ENST00000298552 K7ELQ4 463 aaPredicted RBP8.29□□□□□ -1.08
TSC1-201ENST00000298552 GARSP41250 739 aaKnown RBP8.29□□□□□ -1.08
TSC1-201ENST00000298552 GOLGA8MH3BSY2 632 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 OPHN1O60890 802 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 ATP6V1AP38606 617 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 BASP1P80723 227 aaKnown RBP8.28□□□□□ -1.08
TSC1-201ENST00000298552 GUCY1B3Q02153 619 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 TRIM71Q2Q1W2 868 aaKnown RBP8.28□□□□□ -1.08
TSC1-201ENST00000298552 MYO9BQ13459 2157 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 DHX57Q6P158 1386 aaKnown RBP8.28□□□□□ -1.08
TSC1-201ENST00000298552 FAM83GA6ND36 823 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 SPDYE3A6NKU9 549 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 HNRNPRO43390 633 aaKnown RBP8.28□□□□□ -1.08
TSC1-201ENST00000298552 CAPN2P17655 700 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 PLEKHM3Q6ZWE6 761 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 KLHDC4Q8TBB5 520 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 MYLK2Q9H1R3 596 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 TEX11Q8IYF3 940 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 NDUFAF2Q8N183 169 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 TSC1Q92574 1164 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 COPG2Q9UBF2 871 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 APOA1P02647 267 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 XPAP23025 273 aaPredicted RBP8.28□□□□□ -1.08
TSC1-201ENST00000298552 CAPRIN1Q14444 709 aaKnown RBP8.28□□□□□ -1.08
TSC1-201ENST00000298552 PASD1Q8IV76 773 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 SMARCAD1Q9H4L7 1026 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 GRPEL1Q9HAV7 217 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 CADPSQ9ULU8 1353 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 PTPRCP08575 1304 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 PRR23D1E9PI22 279 aaPredicted RBP8.28□□□□□ -1.08
TSC1-201ENST00000298552 EIF2S1P05198 315 aaKnown RBP8.28□□□□□ -1.08
TSC1-201ENST00000298552 PRR23D2P0DMB1 279 aaPredicted RBP8.28□□□□□ -1.08
TSC1-201ENST00000298552 DENND2CQ68D51 928 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 HIP1RO75146 1068 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 CABP4P57796 275 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 ANO6Q4KMQ2 910 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 RCSD1Q6JBY9 416 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 SRLQ86TD4 932 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 ATPIF1Q9UII2 106 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 DOCK10Q96BY6 2186 aa8.28□□□□□ -1.08
TSC1-201ENST00000298552 HHATQ5VTY9 493 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms