RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 MTERF4Q7Z6M4 381 aaKnown RBP17.42■□□□□ 0.38
CCDC116-201ENST00000292779 FILIP1Q7Z7B0 1213 aa17.42■□□□□ 0.38
CCDC116-201ENST00000292779 STK11IPQ8N1F8 1099 aa17.42■□□□□ 0.38
CCDC116-201ENST00000292779 STAG1Q8WVM7 1258 aa17.42■□□□□ 0.38
CCDC116-201ENST00000292779 WTIPA6NIX2 430 aaPredicted RBP17.41■□□□□ 0.38
CCDC116-201ENST00000292779 FMNL1O95466 1100 aaPredicted RBP17.41■□□□□ 0.38
CCDC116-201ENST00000292779 SYKP43405 635 aa17.41■□□□□ 0.38
CCDC116-201ENST00000292779 C3orf67Q6ZVT6 689 aa17.41■□□□□ 0.38
CCDC116-201ENST00000292779 ZNF710Q8N1W2 664 aa17.41■□□□□ 0.38
CCDC116-201ENST00000292779 JMYQ8N9B5 988 aa17.41■□□□□ 0.38
CCDC116-201ENST00000292779 NEMFO60524 1076 aa17.41■□□□□ 0.38
CCDC116-201ENST00000292779 ERFEQ4G0M1 354 aa17.41■□□□□ 0.38
CCDC116-201ENST00000292779 TBC1D9BQ66K14 1250 aa17.41■□□□□ 0.38
CCDC116-201ENST00000292779 BICDL1Q6ZP65 573 aa17.41■□□□□ 0.38
CCDC116-201ENST00000292779 TIGD1Q96MW7 591 aa17.41■□□□□ 0.38
CCDC116-201ENST00000292779 CDC5LQ99459 802 aaKnown RBP17.41■□□□□ 0.38
CCDC116-201ENST00000292779 HPSEQ9Y251 543 aa17.41■□□□□ 0.38
CCDC116-201ENST00000292779 CASZ1Q86V15 1759 aa17.41■□□□□ 0.38
CCDC116-201ENST00000292779 IFNAR1P17181 557 aa17.4■□□□□ 0.38
CCDC116-201ENST00000292779 GUCY1A2P33402 732 aa17.4■□□□□ 0.38
CCDC116-201ENST00000292779 GLIPR1L2Q4G1C9 344 aa17.4■□□□□ 0.38
CCDC116-201ENST00000292779 CLEC4GQ6UXB4 293 aa17.4■□□□□ 0.38
CCDC116-201ENST00000292779 NBPF11Q86T75 865 aa17.4■□□□□ 0.38
CCDC116-201ENST00000292779 CLIC6Q96NY7 704 aa17.4■□□□□ 0.38
CCDC116-201ENST00000292779 TAF1P21675 1872 aa17.4■□□□□ 0.38
CCDC116-201ENST00000292779 NID2Q14112 1375 aa17.4■□□□□ 0.38
CCDC116-201ENST00000292779 WTAPQ15007 396 aa17.4■□□□□ 0.38
CCDC116-201ENST00000292779 TPD52L1Q16890 204 aaPredicted RBP17.4■□□□□ 0.38
CCDC116-201ENST00000292779 ISM2Q6H9L7 571 aa17.4■□□□□ 0.38
CCDC116-201ENST00000292779 ADGRA1Q86SQ6 560 aa17.4■□□□□ 0.38
CCDC116-201ENST00000292779 RTCBQ9Y3I0 505 aaKnown RBP17.4■□□□□ 0.38
CCDC116-201ENST00000292779 SKILP12757 684 aa17.39■□□□□ 0.37
CCDC116-201ENST00000292779 TNNT1P13805 278 aa17.39■□□□□ 0.37
CCDC116-201ENST00000292779 CYP7A1P22680 504 aa17.39■□□□□ 0.37
CCDC116-201ENST00000292779 GYG1P46976 350 aa17.39■□□□□ 0.37
CCDC116-201ENST00000292779 SART3Q15020 963 aaKnown RBP17.39■□□□□ 0.37
CCDC116-201ENST00000292779 ZNF827Q17R98 1081 aa17.39■□□□□ 0.37
CCDC116-201ENST00000292779 RESP18Q5W5W9 173 aa17.39■□□□□ 0.37
CCDC116-201ENST00000292779 ABCF2Q9UG63 623 aa17.39■□□□□ 0.37
CCDC116-201ENST00000292779 RTN1Q16799 776 aa17.38■□□□□ 0.37
CCDC116-201ENST00000292779 ANKRD18AQ8IVF6 992 aa17.38■□□□□ 0.37
CCDC116-201ENST00000292779 CCDC24Q8N4L8 307 aa17.38■□□□□ 0.37
CCDC116-201ENST00000292779 WASF1Q92558 559 aa17.38■□□□□ 0.37
CCDC116-201ENST00000292779 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.38■□□□□ 0.37
CCDC116-201ENST00000292779 NARFQ9UHQ1 456 aa17.38■□□□□ 0.37
CCDC116-201ENST00000292779 A0A1B0GUL6 1792 aa17.38■□□□□ 0.37
CCDC116-201ENST00000292779 FAM237AA0A1B0GTK4 181 aa17.38■□□□□ 0.37
CCDC116-201ENST00000292779 ERICH2A1L162 156 aa17.38■□□□□ 0.37
CCDC116-201ENST00000292779 CCZ1BP86790 482 aa17.38■□□□□ 0.37
CCDC116-201ENST00000292779 CCZ1P86791 482 aaPredicted RBP17.38■□□□□ 0.37
CCDC116-201ENST00000292779 NCAPHQ15003 741 aa17.38■□□□□ 0.37
CCDC116-201ENST00000292779 NOSTRINQ8IVI9 506 aa17.38■□□□□ 0.37
CCDC116-201ENST00000292779 XPO4Q9C0E2 1151 aaKnown RBP17.38■□□□□ 0.37
CCDC116-201ENST00000292779 TUBE1Q9UJT0 475 aa17.38■□□□□ 0.37
CCDC116-201ENST00000292779 ZNF804BA4D1E1 1349 aa17.38■□□□□ 0.37
CCDC116-201ENST00000292779 MYH6P13533 1939 aa17.38■□□□□ 0.37
CCDC116-201ENST00000292779 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.37■□□□□ 0.37
CCDC116-201ENST00000292779 BTBD18B2RXH4 712 aa17.37■□□□□ 0.37
CCDC116-201ENST00000292779 CUTAO60888 179 aa17.37■□□□□ 0.37
CCDC116-201ENST00000292779 MMP1P03956 469 aa17.37■□□□□ 0.37
CCDC116-201ENST00000292779 PPARAQ07869 468 aa17.37■□□□□ 0.37
CCDC116-201ENST00000292779 TRIM22Q8IYM9 498 aa17.37■□□□□ 0.37
CCDC116-201ENST00000292779 CMTR1Q8N1G2 835 aaKnown RBP17.37■□□□□ 0.37
CCDC116-201ENST00000292779 CCDC82Q8N4S0 544 aa17.37■□□□□ 0.37
CCDC116-201ENST00000292779 SDR42E1Q8WUS8 393 aa17.37■□□□□ 0.37
CCDC116-201ENST00000292779 IFNKQ9P0W0 207 aa17.37■□□□□ 0.37
CCDC116-201ENST00000292779 KCNJ14Q9UNX9 436 aa17.37■□□□□ 0.37
CCDC116-201ENST00000292779 USP27XA6NNY8 438 aa17.37■□□□□ 0.37
CCDC116-201ENST00000292779 SMC2O95347 1197 aa17.37■□□□□ 0.37
CCDC116-201ENST00000292779 PNOCQ13519 176 aa17.37■□□□□ 0.37
CCDC116-201ENST00000292779 RNF41Q9H4P4 317 aaPredicted RBP17.37■□□□□ 0.37
CCDC116-201ENST00000292779 MYH2Q9UKX2 1941 aa17.36■□□□□ 0.37
CCDC116-201ENST00000292779 SMTNL1A8MU46 457 aa17.36■□□□□ 0.37
CCDC116-201ENST00000292779 MINDY4BA8MYZ0 360 aa17.36■□□□□ 0.37
CCDC116-201ENST00000292779 SF3B3Q15393 1217 aaKnown RBP17.36■□□□□ 0.37
CCDC116-201ENST00000292779 SLC27A3Q5K4L6 730 aa17.36■□□□□ 0.37
CCDC116-201ENST00000292779 DIS3L2Q8IYB7 885 aaKnown RBP17.36■□□□□ 0.37
CCDC116-201ENST00000292779 ARID3AQ99856 593 aa17.36■□□□□ 0.37
CCDC116-201ENST00000292779 OSBPL5Q9H0X9 879 aaPredicted RBP17.36■□□□□ 0.37
CCDC116-201ENST00000292779 BSDC1Q9NW68 430 aaPredicted RBP17.36■□□□□ 0.37
CCDC116-201ENST00000292779 RAI14Q9P0K7 980 aa17.36■□□□□ 0.37
CCDC116-201ENST00000292779 BAZ2AQ9UIF9 1905 aaKnown RBP17.36■□□□□ 0.37
CCDC116-201ENST00000292779 PLSCR1O15162 318 aa17.36■□□□□ 0.37
CCDC116-201ENST00000292779 TOB1P50616 345 aaPredicted RBP17.36■□□□□ 0.37
CCDC116-201ENST00000292779 GSDMDP57764 484 aa17.36■□□□□ 0.37
CCDC116-201ENST00000292779 TPM4P67936 248 aa17.36■□□□□ 0.37
CCDC116-201ENST00000292779 SAFBQ15424 915 aaKnown RBP eCLIP17.36■□□□□ 0.37
CCDC116-201ENST00000292779 TMTC2Q8N394 836 aa17.36■□□□□ 0.37
CCDC116-201ENST00000292779 CRACR2BQ8N4Y2 399 aaPredicted RBP17.36■□□□□ 0.37
CCDC116-201ENST00000292779 NUP133Q8WUM0 1156 aa17.36■□□□□ 0.37
CCDC116-201ENST00000292779 IMPACTQ9P2X3 320 aa17.36■□□□□ 0.37
CCDC116-201ENST00000292779 COL1A1P02452 1464 aaPredicted RBP17.35■□□□□ 0.37
CCDC116-201ENST00000292779 MAGEB6P1A0A0J9YX57 407 aa17.35■□□□□ 0.37
CCDC116-201ENST00000292779 SMIM22K7EJ46 135 aa17.35■□□□□ 0.37
CCDC116-201ENST00000292779 CTIFO43310 598 aaKnown RBP17.35■□□□□ 0.37
CCDC116-201ENST00000292779 UBE4AQ14139 1066 aa17.35■□□□□ 0.37
CCDC116-201ENST00000292779 LONRF3Q496Y0 759 aa17.35■□□□□ 0.37
CCDC116-201ENST00000292779 TRAPPC3LQ5T215 181 aa17.35■□□□□ 0.37
CCDC116-201ENST00000292779 ZNF654Q8IZM8 581 aa17.35■□□□□ 0.37
CCDC116-201ENST00000292779 UBAC1Q9BSL1 405 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms