RNA–Protein interactions for RNA: ENST00000292729.12

USP41-201, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP41, Length 920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-201ENST00000292729 MORF4L1Q9UBU8 362 aa13.01□□□□□ -0.33
USP41-201ENST00000292729 GAKO14976 1311 aa13.01□□□□□ -0.33
USP41-201ENST00000292729 MAST2Q6P0Q8 1798 aa13.01□□□□□ -0.33
USP41-201ENST00000292729 DDTLA6NHG4 134 aaPredicted RBP13□□□□□ -0.33
USP41-201ENST00000292729 PRKAR2AP13861 404 aaKnown RBP13□□□□□ -0.33
USP41-201ENST00000292729 MDM2Q00987 491 aaPredicted RBP13□□□□□ -0.33
USP41-201ENST00000292729 SPP2Q13103 211 aa13□□□□□ -0.33
USP41-201ENST00000292729 ZNF280CQ8ND82 737 aa13□□□□□ -0.33
USP41-201ENST00000292729 FAM163AQ96GL9 167 aaPredicted RBP13□□□□□ -0.33
USP41-201ENST00000292729 LBHD1Q9BQE6 289 aaPredicted RBP13□□□□□ -0.33
USP41-201ENST00000292729 NPM3O75607 178 aaKnown RBP12.99□□□□□ -0.33
USP41-201ENST00000292729 CYP2B6P20813 491 aa12.99□□□□□ -0.33
USP41-201ENST00000292729 SH3D19Q5HYK7 790 aa12.99□□□□□ -0.33
USP41-201ENST00000292729 ASCC2Q9H1I8 757 aaPredicted RBP12.99□□□□□ -0.33
USP41-201ENST00000292729 AS3MTQ9HBK9 375 aa12.99□□□□□ -0.33
USP41-201ENST00000292729 FBXO3Q9UK99 471 aa12.99□□□□□ -0.33
USP41-201ENST00000292729 HMGCS2P54868 508 aa12.98□□□□□ -0.33
USP41-201ENST00000292729 PICALMQ13492 652 aa12.98□□□□□ -0.33
USP41-201ENST00000292729 ATP2B3Q16720 1220 aa12.98□□□□□ -0.33
USP41-201ENST00000292729 LRRC26Q2I0M4 334 aa12.98□□□□□ -0.33
USP41-201ENST00000292729 CCDC84Q86UT8 332 aaPredicted RBP12.98□□□□□ -0.33
USP41-201ENST00000292729 DZIP1Q86YF9 867 aaKnown RBP12.98□□□□□ -0.33
USP41-201ENST00000292729 SYMPKQ92797 1274 aaKnown RBP12.98□□□□□ -0.33
USP41-201ENST00000292729 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.98□□□□□ -0.33
USP41-201ENST00000292729 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.98□□□□□ -0.33
USP41-201ENST00000292729 LTBP2Q14767 1821 aa12.97□□□□□ -0.33
USP41-201ENST00000292729 VCANP13611 3396 aa12.97□□□□□ -0.33
USP41-201ENST00000292729 PDS5AQ29RF7 1337 aaKnown RBP12.97□□□□□ -0.33
USP41-201ENST00000292729 USP17L5A8MUK1 530 aa12.97□□□□□ -0.33
USP41-201ENST00000292729 MAP4K4O95819 1239 aaPredicted RBP12.97□□□□□ -0.33
USP41-201ENST00000292729 ZKSCAN1P17029 563 aaPredicted RBP12.97□□□□□ -0.33
USP41-201ENST00000292729 MAPK4P31152 587 aa12.97□□□□□ -0.33
USP41-201ENST00000292729 RFX5P48382 616 aaPredicted RBP12.97□□□□□ -0.33
USP41-201ENST00000292729 IRX3P78415 501 aaPredicted RBP12.97□□□□□ -0.33
USP41-201ENST00000292729 CACNB2Q08289 660 aaPredicted RBP12.97□□□□□ -0.33
USP41-201ENST00000292729 PDE3AQ14432 1141 aa12.97□□□□□ -0.33
USP41-201ENST00000292729 SPTY2D1Q68D10 685 aaPredicted RBP12.97□□□□□ -0.33
USP41-201ENST00000292729 LHX8Q68G74 356 aa12.97□□□□□ -0.33
USP41-201ENST00000292729 FAM161BQ96MY7 647 aa12.97□□□□□ -0.33
USP41-201ENST00000292729 DDX4Q9NQI0 724 aaKnown RBP12.97□□□□□ -0.33
USP41-201ENST00000292729 CIAO1O76071 339 aa12.96□□□□□ -0.33
USP41-201ENST00000292729 HOXA7P31268 230 aaPredicted RBP12.96□□□□□ -0.33
USP41-201ENST00000292729 CAP2P40123 477 aa12.96□□□□□ -0.33
USP41-201ENST00000292729 RGS2P41220 211 aa12.96□□□□□ -0.33
USP41-201ENST00000292729 BTDP43251 543 aa12.96□□□□□ -0.33
USP41-201ENST00000292729 ATG9AQ7Z3C6 839 aa12.96□□□□□ -0.33
USP41-201ENST00000292729 GPRC5AQ8NFJ5 357 aa12.96□□□□□ -0.33
USP41-201ENST00000292729 MAFAQ8NHW3 353 aaPredicted RBP12.96□□□□□ -0.33
USP41-201ENST00000292729 GTF3C2Q8WUA4 911 aaPredicted RBP12.96□□□□□ -0.33
USP41-201ENST00000292729 CDX2Q99626 313 aaPredicted RBP12.96□□□□□ -0.33
USP41-201ENST00000292729 CEP126Q9P2H0 1117 aa12.96□□□□□ -0.33
USP41-201ENST00000292729 PRKAG2Q9UGJ0 569 aa12.96□□□□□ -0.33
USP41-201ENST00000292729 MROH7-TTC4A0A0A0MT08 1334 aa12.95□□□□□ -0.34
USP41-201ENST00000292729 GPR75-ASB3A0A0A6YYF3 556 aa12.95□□□□□ -0.34
USP41-201ENST00000292729 SLURP2P0DP57 97 aa12.95□□□□□ -0.34
USP41-201ENST00000292729 CCND3P30281 292 aaPredicted RBP12.95□□□□□ -0.34
USP41-201ENST00000292729 USP6NLQ92738 828 aa12.95□□□□□ -0.34
USP41-201ENST00000292729 USP44Q9H0E7 712 aa12.95□□□□□ -0.34
USP41-201ENST00000292729 TMOD4Q9NZQ9 345 aa12.95□□□□□ -0.34
USP41-201ENST00000292729 ABCF2Q9UG63 623 aa12.95□□□□□ -0.34
USP41-201ENST00000292729 HERC5Q9UII4 1024 aaKnown RBP12.95□□□□□ -0.34
USP41-201ENST00000292729 PTPRCP08575 1304 aa12.94□□□□□ -0.34
USP41-201ENST00000292729 RLFQ13129 1914 aa12.94□□□□□ -0.34
USP41-201ENST00000292729 C19orf81C9J6K1 198 aa12.94□□□□□ -0.34
USP41-201ENST00000292729 MSCO60682 206 aa12.94□□□□□ -0.34
USP41-201ENST00000292729 PHKA1P46020 1223 aa12.94□□□□□ -0.34
USP41-201ENST00000292729 BACE1P56817 501 aa12.94□□□□□ -0.34
USP41-201ENST00000292729 RHBDL3P58872 404 aa12.94□□□□□ -0.34
USP41-201ENST00000292729 HERVK_113P62684 666 aa12.94□□□□□ -0.34
USP41-201ENST00000292729 CCAR1Q8IX12 1150 aaKnown RBP12.94□□□□□ -0.34
USP41-201ENST00000292729 APBA2Q99767 749 aa12.94□□□□□ -0.34
USP41-201ENST00000292729 WDR18Q9BV38 432 aa12.94□□□□□ -0.34
USP41-201ENST00000292729 SENP6Q9GZR1 1112 aaPredicted RBP12.94□□□□□ -0.34
USP41-201ENST00000292729 SEMA6BQ9H3T3 888 aa12.94□□□□□ -0.34
USP41-201ENST00000292729 SPTBN5Q9NRC6 3674 aaKnown RBP12.93□□□□□ -0.34
USP41-201ENST00000292729 FAM196BA6NMK8 535 aa12.93□□□□□ -0.34
USP41-201ENST00000292729 CCDC102BQ68D86 513 aa12.93□□□□□ -0.34
USP41-201ENST00000292729 GPR142Q7Z601 462 aa12.93□□□□□ -0.34
USP41-201ENST00000292729 P2RX7Q99572 595 aaKnown RBP12.93□□□□□ -0.34
USP41-201ENST00000292729 TXNRD2Q9NNW7 524 aa12.93□□□□□ -0.34
USP41-201ENST00000292729 SALL2Q9Y467 1007 aaPredicted RBP12.93□□□□□ -0.34
USP41-201ENST00000292729 GLRX3O76003 335 aaKnown RBP12.92□□□□□ -0.34
USP41-201ENST00000292729 LDHCP07864 332 aa12.92□□□□□ -0.34
USP41-201ENST00000292729 ASNSP08243 561 aa12.92□□□□□ -0.34
USP41-201ENST00000292729 IL15P40933 162 aaPredicted RBP12.92□□□□□ -0.34
USP41-201ENST00000292729 ERVK-9P63128 1117 aa12.92□□□□□ -0.34
USP41-201ENST00000292729 ERVK-24P63145 666 aa12.92□□□□□ -0.34
USP41-201ENST00000292729 GSTO1P78417 241 aa12.92□□□□□ -0.34
USP41-201ENST00000292729 SMAD3P84022 425 aaKnown RBP12.92□□□□□ -0.34
USP41-201ENST00000292729 MTMR2Q13614 643 aa12.92□□□□□ -0.34
USP41-201ENST00000292729 CCDC184Q52MB2 194 aa12.92□□□□□ -0.34
USP41-201ENST00000292729 MORN1Q5T089 497 aa12.92□□□□□ -0.34
USP41-201ENST00000292729 ERICH6Q7L0X2 663 aa12.92□□□□□ -0.34
USP41-201ENST00000292729 PLEKHH3Q7Z736 793 aa12.92□□□□□ -0.34
USP41-201ENST00000292729 LPAR1Q92633 364 aa12.92□□□□□ -0.34
USP41-201ENST00000292729 GINM1Q9NU53 330 aa12.92□□□□□ -0.34
USP41-201ENST00000292729 RBPJLQ9UBG7 517 aa12.92□□□□□ -0.34
USP41-201ENST00000292729 LAMA2P24043 3122 aaKnown RBP12.91□□□□□ -0.34
USP41-201ENST00000292729 EYSQ5T1H1 3165 aa12.91□□□□□ -0.34
USP41-201ENST00000292729 DNM1LO00429 736 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms