RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 PDE1AP54750 535 aa16.2■□□□□ 0.18
PSMB4-201ENST00000290541 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.2■□□□□ 0.18
PSMB4-201ENST00000290541 DNAJC2Q99543 621 aaKnown RBP16.2■□□□□ 0.18
PSMB4-201ENST00000290541 PCDHAC2Q9Y5I4 1007 aa16.2■□□□□ 0.18
PSMB4-201ENST00000290541 PPP1R12BO60237 982 aaPredicted RBP16.19■□□□□ 0.18
PSMB4-201ENST00000290541 MAP4K4O95819 1239 aaPredicted RBP16.19■□□□□ 0.18
PSMB4-201ENST00000290541 TBC1D22AQ8WUA7 517 aa16.19■□□□□ 0.18
PSMB4-201ENST00000290541 ZBED3Q96IU2 234 aaPredicted RBP16.19■□□□□ 0.18
PSMB4-201ENST00000290541 PAWRQ96IZ0 340 aaKnown RBP16.19■□□□□ 0.18
PSMB4-201ENST00000290541 HAUS7Q99871 368 aa16.19■□□□□ 0.18
PSMB4-201ENST00000290541 ABCF2Q9UG63 623 aa16.19■□□□□ 0.18
PSMB4-201ENST00000290541 TTC41PQ6P2S7 1318 aa16.19■□□□□ 0.18
PSMB4-201ENST00000290541 SALL1Q9NSC2 1324 aa16.19■□□□□ 0.18
PSMB4-201ENST00000290541 MGAMO43451 1857 aa16.18■□□□□ 0.18
PSMB4-201ENST00000290541 GOLIM4O00461 696 aa16.18■□□□□ 0.18
PSMB4-201ENST00000290541 UBXN2AP68543 259 aa16.18■□□□□ 0.18
PSMB4-201ENST00000290541 ZNF384Q8TF68 577 aa16.18■□□□□ 0.18
PSMB4-201ENST00000290541 OPTNQ96CV9 577 aa16.18■□□□□ 0.18
PSMB4-201ENST00000290541 TRIM47Q96LD4 638 aa16.18■□□□□ 0.18
PSMB4-201ENST00000290541 DEFB129Q9H1M3 183 aa16.18■□□□□ 0.18
PSMB4-201ENST00000290541 TTF2Q9UNY4 1162 aaKnown RBP16.18■□□□□ 0.18
PSMB4-201ENST00000290541 MYO3BQ8WXR4 1341 aa16.18■□□□□ 0.18
PSMB4-201ENST00000290541 CCL15-CCL14A0A0B4J2E2 113 aa16.17■□□□□ 0.18
PSMB4-201ENST00000290541 OSBPP22059 807 aa16.17■□□□□ 0.18
PSMB4-201ENST00000290541 CCL15Q16663 113 aa16.17■□□□□ 0.18
PSMB4-201ENST00000290541 ZNF697Q5TEC3 545 aa16.17■□□□□ 0.18
PSMB4-201ENST00000290541 RAET1EQ8TD07 263 aa16.17■□□□□ 0.18
PSMB4-201ENST00000290541 DIS3LQ8TF46 1054 aaKnown RBP16.17■□□□□ 0.18
PSMB4-201ENST00000290541 GPATCH3Q96I76 525 aa16.17■□□□□ 0.18
PSMB4-201ENST00000290541 AOX1Q06278 1338 aa16.17■□□□□ 0.18
PSMB4-201ENST00000290541 LDHBP07195 334 aaKnown RBP16.16■□□□□ 0.18
PSMB4-201ENST00000290541 CAPN2P17655 700 aa16.16■□□□□ 0.18
PSMB4-201ENST00000290541 DIXDC1Q155Q3 683 aa16.16■□□□□ 0.18
PSMB4-201ENST00000290541 ANKRD13AQ8IZ07 590 aa16.16■□□□□ 0.18
PSMB4-201ENST00000290541 PAG1Q9NWQ8 432 aa16.16■□□□□ 0.18
PSMB4-201ENST00000290541 GTF3C3Q9Y5Q9 886 aa16.16■□□□□ 0.18
PSMB4-201ENST00000290541 DDX60LQ5H9U9 1706 aaKnown RBP16.16■□□□□ 0.18
PSMB4-201ENST00000290541 USP2O75604 605 aaPredicted RBP16.15■□□□□ 0.18
PSMB4-201ENST00000290541 GLRX3O76003 335 aaKnown RBP16.15■□□□□ 0.18
PSMB4-201ENST00000290541 CHGBP05060 677 aa16.15■□□□□ 0.18
PSMB4-201ENST00000290541 MECOMQ03112 1051 aa16.15■□□□□ 0.18
PSMB4-201ENST00000290541 SLFNL1Q499Z3 407 aa16.15■□□□□ 0.18
PSMB4-201ENST00000290541 ERICH6Q7L0X2 663 aa16.15■□□□□ 0.18
PSMB4-201ENST00000290541 OGFOD1Q8N543 542 aa16.15■□□□□ 0.18
PSMB4-201ENST00000290541 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
PSMB4-201ENST00000290541 CRISPLD2Q9H0B8 497 aa16.15■□□□□ 0.18
PSMB4-201ENST00000290541 OSBPL3Q9H4L5 887 aa16.15■□□□□ 0.18
PSMB4-201ENST00000290541 ELP3Q9H9T3 547 aa16.15■□□□□ 0.18
PSMB4-201ENST00000290541 LRP2BPQ9P2M1 347 aa16.15■□□□□ 0.18
PSMB4-201ENST00000290541 MYPNQ86TC9 1320 aa16.15■□□□□ 0.18
PSMB4-201ENST00000290541 ERC2O15083 957 aa16.14■□□□□ 0.17
PSMB4-201ENST00000290541 PSMC4P43686 418 aa16.14■□□□□ 0.17
PSMB4-201ENST00000290541 IREB2P48200 963 aaKnown RBP16.14■□□□□ 0.17
PSMB4-201ENST00000290541 CFAP100Q494V2 611 aa16.14■□□□□ 0.17
PSMB4-201ENST00000290541 NECAB2Q7Z6G3 386 aa16.14■□□□□ 0.17
PSMB4-201ENST00000290541 ZGPATQ8N5A5 531 aaKnown RBP16.14■□□□□ 0.17
PSMB4-201ENST00000290541 MYLIPQ8WY64 445 aa16.14■□□□□ 0.17
PSMB4-201ENST00000290541 NSUN4Q96CB9 384 aaKnown RBP16.14■□□□□ 0.17
PSMB4-201ENST00000290541 RAI14Q9P0K7 980 aa16.14■□□□□ 0.17
PSMB4-201ENST00000290541 BIN2Q9UBW5 565 aaPredicted RBP16.14■□□□□ 0.17
PSMB4-201ENST00000290541 SUGT1Q9Y2Z0 365 aa16.14■□□□□ 0.17
PSMB4-201ENST00000290541 DOCK2Q92608 1830 aa16.13■□□□□ 0.17
PSMB4-201ENST00000290541 IDH1O75874 414 aaKnown RBP16.13■□□□□ 0.17
PSMB4-201ENST00000290541 TFRCP02786 760 aaKnown RBP16.13■□□□□ 0.17
PSMB4-201ENST00000290541 CRKP46108 304 aa16.13■□□□□ 0.17
PSMB4-201ENST00000290541 SPTY2D1Q68D10 685 aaPredicted RBP16.13■□□□□ 0.17
PSMB4-201ENST00000290541 PPP2R3BQ9Y5P8 575 aa16.13■□□□□ 0.17
PSMB4-201ENST00000290541 ADGRA2Q96PE1 1338 aa16.13■□□□□ 0.17
PSMB4-201ENST00000290541 MYH2Q9UKX2 1941 aa16.12■□□□□ 0.17
PSMB4-201ENST00000290541 RGS3P49796 1198 aa16.12■□□□□ 0.17
PSMB4-201ENST00000290541 GTF2A2P52657 109 aa16.12■□□□□ 0.17
PSMB4-201ENST00000290541 C17orf99Q6UX52 265 aa16.12■□□□□ 0.17
PSMB4-201ENST00000290541 ADGRA1Q86SQ6 560 aa16.12■□□□□ 0.17
PSMB4-201ENST00000290541 DZIP1Q86YF9 867 aaKnown RBP16.12■□□□□ 0.17
PSMB4-201ENST00000290541 SLAIN1Q8ND83 568 aa16.12■□□□□ 0.17
PSMB4-201ENST00000290541 PRMT6Q96LA8 375 aaPredicted RBP16.12■□□□□ 0.17
PSMB4-201ENST00000290541 DEFB118Q96PH6 123 aa16.12■□□□□ 0.17
PSMB4-201ENST00000290541 ZCCHC17Q9NP64 241 aaKnown RBP16.12■□□□□ 0.17
PSMB4-201ENST00000290541 PAK6Q9NQU5 681 aaPredicted RBP16.12■□□□□ 0.17
PSMB4-201ENST00000290541 GSPT1P15170 499 aaKnown RBP16.11■□□□□ 0.17
PSMB4-201ENST00000290541 HOXD10P28358 340 aa16.11■□□□□ 0.17
PSMB4-201ENST00000290541 RBM5P52756 815 aaKnown RBP eCLIP16.11■□□□□ 0.17
PSMB4-201ENST00000290541 TTF1Q15361 905 aaPredicted RBP16.11■□□□□ 0.17
PSMB4-201ENST00000290541 NBPF12Q5TAG4 269 aaPredicted RBP16.11■□□□□ 0.17
PSMB4-201ENST00000290541 APOBEC3HQ6NTF7 200 aaKnown RBP16.11■□□□□ 0.17
PSMB4-201ENST00000290541 MAGEB6Q8N7X4 407 aa16.11■□□□□ 0.17
PSMB4-201ENST00000290541 MTMR14Q8NCE2 650 aa16.11■□□□□ 0.17
PSMB4-201ENST00000290541 SEMA6BQ9H3T3 888 aa16.11■□□□□ 0.17
PSMB4-201ENST00000290541 SERPINA10Q9UK55 444 aa16.11■□□□□ 0.17
PSMB4-201ENST00000290541 DAGLAQ9Y4D2 1042 aa16.11■□□□□ 0.17
PSMB4-201ENST00000290541 SPDYE2BA6NHP3 402 aa16.1■□□□□ 0.17
PSMB4-201ENST00000290541 SPDYE6P0CI01 402 aa16.1■□□□□ 0.17
PSMB4-201ENST00000290541 PDE6AP16499 860 aa16.1■□□□□ 0.17
PSMB4-201ENST00000290541 MMP14P50281 582 aa16.1■□□□□ 0.17
PSMB4-201ENST00000290541 HDLBPQ00341 1268 aaKnown RBP16.1■□□□□ 0.17
PSMB4-201ENST00000290541 PRKCZQ05513 592 aa16.1■□□□□ 0.17
PSMB4-201ENST00000290541 DLGAP5Q15398 846 aa16.1■□□□□ 0.17
PSMB4-201ENST00000290541 TTC22Q5TAA0 569 aa16.1■□□□□ 0.17
PSMB4-201ENST00000290541 HHIPL2Q6UWX4 724 aa16.1■□□□□ 0.17
PSMB4-201ENST00000290541 KBTBD3Q8NAB2 608 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms