RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 TXKP42681 527 aa17.38■□□□□ 0.37
TIMP3-201ENST00000266085 CCDC42Q96M95 316 aa17.38■□□□□ 0.37
TIMP3-201ENST00000266085 VPS54Q9P1Q0 977 aa17.38■□□□□ 0.37
TIMP3-201ENST00000266085 SV2BQ7L1I2 683 aa17.38■□□□□ 0.37
TIMP3-201ENST00000266085 CCDC113Q9H0I3 377 aa17.38■□□□□ 0.37
TIMP3-201ENST00000266085 ZSWIM6Q9HCJ5 1215 aa17.38■□□□□ 0.37
TIMP3-201ENST00000266085 SPHKAPQ2M3C7 1700 aa17.38■□□□□ 0.37
TIMP3-201ENST00000266085 GOLGA6L7A0A1B0GV03 622 aa17.38■□□□□ 0.37
TIMP3-201ENST00000266085 CUTAO60888 179 aa17.38■□□□□ 0.37
TIMP3-201ENST00000266085 RASEFQ8IZ41 740 aa17.38■□□□□ 0.37
TIMP3-201ENST00000266085 THRAP3Q9Y2W1 955 aaKnown RBP17.38■□□□□ 0.37
TIMP3-201ENST00000266085 PHACTR2O75167 634 aa17.38■□□□□ 0.37
TIMP3-201ENST00000266085 RXRBP28702 533 aa17.38■□□□□ 0.37
TIMP3-201ENST00000266085 UBXN1Q04323 297 aa17.38■□□□□ 0.37
TIMP3-201ENST00000266085 ZNF274Q96GC6 653 aaPredicted RBP17.38■□□□□ 0.37
TIMP3-201ENST00000266085 BRD1O95696 1058 aa17.37■□□□□ 0.37
TIMP3-201ENST00000266085 NONOQ15233 471 aaKnown RBP eCLIP17.37■□□□□ 0.37
TIMP3-201ENST00000266085 ZNF772Q68DY9 489 aaPredicted RBP17.37■□□□□ 0.37
TIMP3-201ENST00000266085 MAP4K1Q92918 833 aa17.37■□□□□ 0.37
TIMP3-201ENST00000266085 ANTXR1Q9H6X2 564 aa17.37■□□□□ 0.37
TIMP3-201ENST00000266085 CCNT1O60563 726 aaKnown RBP17.37■□□□□ 0.37
TIMP3-201ENST00000266085 FERMT2Q96AC1 680 aa17.37■□□□□ 0.37
TIMP3-201ENST00000266085 PLVAPQ9BX97 442 aa17.37■□□□□ 0.37
TIMP3-201ENST00000266085 ZNF408Q9H9D4 720 aa17.37■□□□□ 0.37
TIMP3-201ENST00000266085 GOPCQ9HD26 462 aa17.37■□□□□ 0.37
TIMP3-201ENST00000266085 SRP68Q9UHB9 627 aaKnown RBP17.37■□□□□ 0.37
TIMP3-201ENST00000266085 PALLDQ8WX93 1383 aa17.37■□□□□ 0.37
TIMP3-201ENST00000266085 POLR2DO15514 142 aaKnown RBP17.37■□□□□ 0.37
TIMP3-201ENST00000266085 TUBB4AP04350 444 aa17.37■□□□□ 0.37
TIMP3-201ENST00000266085 PI16Q6UXB8 463 aa17.37■□□□□ 0.37
TIMP3-201ENST00000266085 HOOK3Q86VS8 718 aa17.37■□□□□ 0.37
TIMP3-201ENST00000266085 TPCN1Q9ULQ1 816 aa17.37■□□□□ 0.37
TIMP3-201ENST00000266085 PPP1R2P41236 205 aa17.36■□□□□ 0.37
TIMP3-201ENST00000266085 KRT83P78385 493 aa17.36■□□□□ 0.37
TIMP3-201ENST00000266085 KIF5AQ12840 1032 aa17.36■□□□□ 0.37
TIMP3-201ENST00000266085 CCDC65Q8IXS2 484 aa17.36■□□□□ 0.37
TIMP3-201ENST00000266085 CMTR1Q8N1G2 835 aaKnown RBP17.36■□□□□ 0.37
TIMP3-201ENST00000266085 LUC7L2Q9Y383 392 aaKnown RBP17.36■□□□□ 0.37
TIMP3-201ENST00000266085 TNKSO95271 1327 aa17.36■□□□□ 0.37
TIMP3-201ENST00000266085 XDHP47989 1333 aa17.36■□□□□ 0.37
TIMP3-201ENST00000266085 ZMYM1Q5SVZ6 1142 aa17.36■□□□□ 0.37
TIMP3-201ENST00000266085 DYDC1Q8WWB3 177 aa17.36■□□□□ 0.37
TIMP3-201ENST00000266085 LZTS2Q9BRK4 669 aa17.36■□□□□ 0.37
TIMP3-201ENST00000266085 ATG3Q9NT62 314 aa17.36■□□□□ 0.37
TIMP3-201ENST00000266085 TMOD4Q9NZQ9 345 aa17.36■□□□□ 0.37
TIMP3-201ENST00000266085 CCT6AP40227 531 aaKnown RBP17.36■□□□□ 0.37
TIMP3-201ENST00000266085 CLSTN2Q9H4D0 955 aa17.36■□□□□ 0.37
TIMP3-201ENST00000266085 KRT86O43790 486 aa17.36■□□□□ 0.37
TIMP3-201ENST00000266085 ARID5AQ03989 594 aa17.36■□□□□ 0.37
TIMP3-201ENST00000266085 IMPG2Q9BZV3 1241 aa17.36■□□□□ 0.37
TIMP3-201ENST00000266085 LSG1Q9H089 658 aaKnown RBP17.36■□□□□ 0.37
TIMP3-201ENST00000266085 TACC1O75410 805 aa17.35■□□□□ 0.37
TIMP3-201ENST00000266085 SASH1O94885 1247 aa17.35■□□□□ 0.37
TIMP3-201ENST00000266085 NEK11Q8NG66 645 aa17.35■□□□□ 0.37
TIMP3-201ENST00000266085 LEMD3Q9Y2U8 911 aa17.35■□□□□ 0.37
TIMP3-201ENST00000266085 DYNC1I1O14576 645 aa17.35■□□□□ 0.37
TIMP3-201ENST00000266085 EZRP15311 586 aaKnown RBP17.35■□□□□ 0.37
TIMP3-201ENST00000266085 BTDP43251 543 aa17.35■□□□□ 0.37
TIMP3-201ENST00000266085 ADCY7P51828 1080 aa17.35■□□□□ 0.37
TIMP3-201ENST00000266085 CKAP4Q07065 602 aaKnown RBP17.35■□□□□ 0.37
TIMP3-201ENST00000266085 KRT25Q7Z3Z0 450 aa17.35■□□□□ 0.37
TIMP3-201ENST00000266085 ADGRB3O60242 1522 aa17.35■□□□□ 0.37
TIMP3-201ENST00000266085 CHMP2AO43633 222 aa17.35■□□□□ 0.37
TIMP3-201ENST00000266085 IGKV5-2P06315 115 aa17.35■□□□□ 0.37
TIMP3-201ENST00000266085 RPL13P26373 211 aaKnown RBP17.35■□□□□ 0.37
TIMP3-201ENST00000266085 USH1GQ495M9 461 aa17.35■□□□□ 0.37
TIMP3-201ENST00000266085 FANCBQ8NB91 859 aa17.35■□□□□ 0.37
TIMP3-201ENST00000266085 ADCK5Q3MIX3 580 aa17.35■□□□□ 0.37
TIMP3-201ENST00000266085 SUSD4Q5VX71 490 aa17.35■□□□□ 0.37
TIMP3-201ENST00000266085 ZSCAN10Q96SZ4 725 aaPredicted RBP17.35■□□□□ 0.37
TIMP3-201ENST00000266085 RBSNQ9H1K0 784 aa17.35■□□□□ 0.37
TIMP3-201ENST00000266085 ZNF202O95125 648 aa17.34■□□□□ 0.37
TIMP3-201ENST00000266085 HLFQ16534 295 aa17.34■□□□□ 0.37
TIMP3-201ENST00000266085 NSMFQ6X4W1 530 aa17.34■□□□□ 0.37
TIMP3-201ENST00000266085 PNMA1Q8ND90 353 aa17.34■□□□□ 0.37
TIMP3-201ENST00000266085 TTLL11Q8NHH1 800 aa17.34■□□□□ 0.37
TIMP3-201ENST00000266085 DRC1Q96MC2 740 aa17.34■□□□□ 0.37
TIMP3-201ENST00000266085 CTAGE15A4D2H0 777 aa17.34■□□□□ 0.37
TIMP3-201ENST00000266085 H7C1D1 291 aa17.34■□□□□ 0.37
TIMP3-201ENST00000266085 H7C1W4 665 aa17.34■□□□□ 0.37
TIMP3-201ENST00000266085 CTAGE8P0CG41 777 aa17.34■□□□□ 0.37
TIMP3-201ENST00000266085 CPSF1Q10570 1443 aaKnown RBP17.34■□□□□ 0.37
TIMP3-201ENST00000266085 CTAGE6Q86UF2 777 aa17.34■□□□□ 0.37
TIMP3-201ENST00000266085 CTAGE4Q8IX94 777 aa17.34■□□□□ 0.37
TIMP3-201ENST00000266085 GADD45BO75293 160 aaPredicted RBP17.34■□□□□ 0.37
TIMP3-201ENST00000266085 CYP21A2P08686 494 aa17.34■□□□□ 0.37
TIMP3-201ENST00000266085 HAUS3Q68CZ6 603 aa17.34■□□□□ 0.37
TIMP3-201ENST00000266085 VTI1AQ96AJ9 217 aa17.34■□□□□ 0.37
TIMP3-201ENST00000266085 CDC42BPGQ6DT37 1551 aa17.34■□□□□ 0.37
TIMP3-201ENST00000266085 CFBP00751 764 aa17.33■□□□□ 0.37
TIMP3-201ENST00000266085 MYSM1Q5VVJ2 828 aa17.33■□□□□ 0.37
TIMP3-201ENST00000266085 ZNF589Q86UQ0 364 aaPredicted RBP17.33■□□□□ 0.37
TIMP3-201ENST00000266085 CNGA4Q8IV77 575 aa17.33■□□□□ 0.37
TIMP3-201ENST00000266085 REXO1Q8N1G1 1221 aaKnown RBP17.33■□□□□ 0.37
TIMP3-201ENST00000266085 HOOK2Q96ED9 719 aa17.33■□□□□ 0.37
TIMP3-201ENST00000266085 LMBRD1Q9NUN5 540 aa17.33■□□□□ 0.37
TIMP3-201ENST00000266085 RNF216Q9NWF9 866 aaPredicted RBP17.33■□□□□ 0.37
TIMP3-201ENST00000266085 MAPK8IP1Q9UQF2 711 aa17.33■□□□□ 0.37
TIMP3-201ENST00000266085 TRAF5O00463 557 aa17.33■□□□□ 0.37
TIMP3-201ENST00000266085 BBOX1O75936 387 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms