RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 CSRNP2Q9H175 543 aa19.26■□□□□ 0.67
SQLE-201ENST00000265896 PARP3Q9Y6F1 533 aa19.26■□□□□ 0.67
SQLE-201ENST00000265896 SLC4A4Q9Y6R1 1079 aa19.26■□□□□ 0.67
SQLE-201ENST00000265896 PSDA5PKW4 1024 aaPredicted RBP19.25■□□□□ 0.67
SQLE-201ENST00000265896 PDE8BO95263 885 aa19.25■□□□□ 0.67
SQLE-201ENST00000265896 PCCAP05165 728 aaPredicted RBP19.25■□□□□ 0.67
SQLE-201ENST00000265896 PLA2G4AP47712 749 aa19.25■□□□□ 0.67
SQLE-201ENST00000265896 CTSWP56202 376 aa19.25■□□□□ 0.67
SQLE-201ENST00000265896 NOL10Q9BSC4 688 aaKnown RBP19.25■□□□□ 0.67
SQLE-201ENST00000265896 USP54Q70EL1 1684 aa19.25■□□□□ 0.67
SQLE-201ENST00000265896 CPDO75976 1380 aa19.25■□□□□ 0.67
SQLE-201ENST00000265896 GPIHBP1Q8IV16 184 aa19.25■□□□□ 0.67
SQLE-201ENST00000265896 BPIFA3Q9BQP9 254 aa19.25■□□□□ 0.67
SQLE-201ENST00000265896 MRPL44Q9H9J2 332 aaKnown RBP19.25■□□□□ 0.67
SQLE-201ENST00000265896 RNF216Q9NWF9 866 aaPredicted RBP19.25■□□□□ 0.67
SQLE-201ENST00000265896 A0A087X0B3 334 aa19.24■□□□□ 0.67
SQLE-201ENST00000265896 H2AFXP16104 143 aaPredicted RBP19.24■□□□□ 0.67
SQLE-201ENST00000265896 CCT6AP40227 531 aaKnown RBP19.24■□□□□ 0.67
SQLE-201ENST00000265896 TMCO3Q6UWJ1 677 aa19.24■□□□□ 0.67
SQLE-201ENST00000265896 MFSD6Q6ZSS7 791 aa19.24■□□□□ 0.67
SQLE-201ENST00000265896 SLC4A9Q96Q91 983 aa19.24■□□□□ 0.67
SQLE-201ENST00000265896 BLZF1Q9H2G9 400 aa19.24■□□□□ 0.67
SQLE-201ENST00000265896 ABCC6O95255 1503 aa19.24■□□□□ 0.67
SQLE-201ENST00000265896 IKBKBO14920 756 aa19.24■□□□□ 0.67
SQLE-201ENST00000265896 SASH3O75995 380 aa19.24■□□□□ 0.67
SQLE-201ENST00000265896 CDKL5O76039 1030 aa19.24■□□□□ 0.67
SQLE-201ENST00000265896 RIC1Q4ADV7 1423 aa19.24■□□□□ 0.67
SQLE-201ENST00000265896 ST5P78524 1137 aa19.23■□□□□ 0.67
SQLE-201ENST00000265896 RTN1Q16799 776 aa19.23■□□□□ 0.67
SQLE-201ENST00000265896 WWC2Q6AWC2 1192 aa19.23■□□□□ 0.67
SQLE-201ENST00000265896 SPATA5Q8NB90 893 aa19.23■□□□□ 0.67
SQLE-201ENST00000265896 CCDC12Q8WUD4 166 aaPredicted RBP19.23■□□□□ 0.67
SQLE-201ENST00000265896 CASQ1P31415 396 aa19.23■□□□□ 0.67
SQLE-201ENST00000265896 TMEM139Q8IV31 216 aa19.23■□□□□ 0.67
SQLE-201ENST00000265896 TC2NQ8N9U0 490 aa19.23■□□□□ 0.67
SQLE-201ENST00000265896 SMARCE1Q969G3 411 aa19.23■□□□□ 0.67
SQLE-201ENST00000265896 TEX13AQ9BXU3 409 aaPredicted RBP19.23■□□□□ 0.67
SQLE-201ENST00000265896 CSF1RP07333 972 aa19.23■□□□□ 0.67
SQLE-201ENST00000265896 SAFBQ15424 915 aaKnown RBP eCLIP19.23■□□□□ 0.67
SQLE-201ENST00000265896 ZNF174Q15697 407 aa19.23■□□□□ 0.67
SQLE-201ENST00000265896 SHISA4Q96DD7 197 aa19.23■□□□□ 0.67
SQLE-201ENST00000265896 HINFPQ9BQA5 517 aa19.23■□□□□ 0.67
SQLE-201ENST00000265896 LRP2BPQ9P2M1 347 aa19.23■□□□□ 0.67
SQLE-201ENST00000265896 ERVV-2B6SEH9 535 aa19.22■□□□□ 0.67
SQLE-201ENST00000265896 ATG3Q9NT62 314 aa19.22■□□□□ 0.67
SQLE-201ENST00000265896 SPATA31A3Q5VYP0 1347 aa19.22■□□□□ 0.67
SQLE-201ENST00000265896 WDR17Q8IZU2 1322 aa19.22■□□□□ 0.67
SQLE-201ENST00000265896 PPP6R2O75170 966 aa19.22■□□□□ 0.67
SQLE-201ENST00000265896 GABPB1Q06547 395 aaPredicted RBP19.22■□□□□ 0.67
SQLE-201ENST00000265896 BMS1Q14692 1282 aaKnown RBP19.22■□□□□ 0.67
SQLE-201ENST00000265896 WTAPQ15007 396 aa19.22■□□□□ 0.67
SQLE-201ENST00000265896 ADGRA1Q86SQ6 560 aa19.22■□□□□ 0.67
SQLE-201ENST00000265896 SUGCTQ9HAC7 445 aa19.22■□□□□ 0.67
SQLE-201ENST00000265896 GSG1L2A8MUP6 293 aa19.21■□□□□ 0.67
SQLE-201ENST00000265896 KIF2AO00139 706 aaPredicted RBP19.21■□□□□ 0.67
SQLE-201ENST00000265896 CUTAO60888 179 aa19.21■□□□□ 0.67
SQLE-201ENST00000265896 CD44P16070 742 aaKnown RBP19.21■□□□□ 0.67
SQLE-201ENST00000265896 TFR2Q9UP52 801 aa19.21■□□□□ 0.67
SQLE-201ENST00000265896 TCRBV5S4A2TA0A5A2 114 aa19.21■□□□□ 0.67
SQLE-201ENST00000265896 CBFA2T2O43439 604 aa19.21■□□□□ 0.67
SQLE-201ENST00000265896 GIGYF2Q6Y7W6 1299 aaKnown RBP19.21■□□□□ 0.67
SQLE-201ENST00000265896 MPHOSPH8Q99549 860 aa19.21■□□□□ 0.67
SQLE-201ENST00000265896 FBXO2Q9UK22 296 aaPredicted RBP19.21■□□□□ 0.67
SQLE-201ENST00000265896 PES1O00541 588 aaKnown RBP19.2■□□□□ 0.66
SQLE-201ENST00000265896 TADA3O75528 432 aa19.2■□□□□ 0.66
SQLE-201ENST00000265896 MMP1P03956 469 aa19.2■□□□□ 0.66
SQLE-201ENST00000265896 VEGFAP15692 232 aaPredicted RBP19.2■□□□□ 0.66
SQLE-201ENST00000265896 ADAMTS3O15072 1205 aa19.2■□□□□ 0.66
SQLE-201ENST00000265896 PPP2R3AQ06190 1150 aa19.2■□□□□ 0.66
SQLE-201ENST00000265896 AKNAD1Q5T1N1 836 aa19.2■□□□□ 0.66
SQLE-201ENST00000265896 TRIM22Q8IYM9 498 aa19.2■□□□□ 0.66
SQLE-201ENST00000265896 VGLL2Q8N8G2 317 aa19.2■□□□□ 0.66
SQLE-201ENST00000265896 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.2■□□□□ 0.66
SQLE-201ENST00000265896 MYO5AQ9Y4I1 1855 aaKnown RBP19.2■□□□□ 0.66
SQLE-201ENST00000265896 NMT2O60551 498 aa19.2■□□□□ 0.66
SQLE-201ENST00000265896 STARD3NLO95772 234 aa19.2■□□□□ 0.66
SQLE-201ENST00000265896 KCNQ4P56696 695 aa19.2■□□□□ 0.66
SQLE-201ENST00000265896 MDM2Q00987 491 aaPredicted RBP19.2■□□□□ 0.66
SQLE-201ENST00000265896 SPECC1LQ69YQ0 1117 aa19.2■□□□□ 0.66
SQLE-201ENST00000265896 PLIN2Q99541 437 aa19.2■□□□□ 0.66
SQLE-201ENST00000265896 V9GY48 417 aaPredicted RBP19.2■□□□□ 0.66
SQLE-201ENST00000265896 MAP3K15Q6ZN16 1313 aa19.19■□□□□ 0.66
SQLE-201ENST00000265896 PATL2C9JE40 543 aaKnown RBP19.19■□□□□ 0.66
SQLE-201ENST00000265896 PLEKHA8P1O95397 391 aa19.19■□□□□ 0.66
SQLE-201ENST00000265896 RBL2Q08999 1139 aa19.19■□□□□ 0.66
SQLE-201ENST00000265896 FBXL16Q8N461 479 aa19.19■□□□□ 0.66
SQLE-201ENST00000265896 CCDC24Q8N4L8 307 aa19.19■□□□□ 0.66
SQLE-201ENST00000265896 MYH15Q9Y2K3 1946 aa19.19■□□□□ 0.66
SQLE-201ENST00000265896 SKIDA1Q1XH10 827 aa19.19■□□□□ 0.66
SQLE-201ENST00000265896 MAP3K12Q12852 859 aa19.18■□□□□ 0.66
SQLE-201ENST00000265896 DZIP3Q86Y13 1208 aaKnown RBP19.18■□□□□ 0.66
SQLE-201ENST00000265896 ACRBPQ8NEB7 543 aa19.18■□□□□ 0.66
SQLE-201ENST00000265896 FMNL1O95466 1100 aaPredicted RBP19.18■□□□□ 0.66
SQLE-201ENST00000265896 MCM6Q14566 821 aa19.18■□□□□ 0.66
SQLE-201ENST00000265896 UBE3CQ15386 1083 aa19.18■□□□□ 0.66
SQLE-201ENST00000265896 RAD9BQ6WBX8 426 aa19.18■□□□□ 0.66
SQLE-201ENST00000265896 BRINP3Q76B58 766 aa19.18■□□□□ 0.66
SQLE-201ENST00000265896 TMEM87BQ96K49 555 aa19.18■□□□□ 0.66
SQLE-201ENST00000265896 TIGD1Q96MW7 591 aa19.18■□□□□ 0.66
SQLE-201ENST00000265896 UBAC1Q9BSL1 405 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms