RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 GAS2L3Q86XJ1 694 aa18.87■□□□□ 0.61
PHRF1-201ENST00000264555 NOSTRINQ8IVI9 506 aa18.87■□□□□ 0.61
PHRF1-201ENST00000264555 KRT222Q8N1A0 295 aa18.87■□□□□ 0.61
PHRF1-201ENST00000264555 GLT8D2Q9H1C3 349 aa18.87■□□□□ 0.61
PHRF1-201ENST00000264555 POLR1AO95602 1720 aaPredicted RBP18.87■□□□□ 0.61
PHRF1-201ENST00000264555 KRT25Q7Z3Z0 450 aa18.87■□□□□ 0.61
PHRF1-201ENST00000264555 VEZTQ9HBM0 779 aa18.87■□□□□ 0.61
PHRF1-201ENST00000264555 KRT13P13646 458 aa18.86■□□□□ 0.61
PHRF1-201ENST00000264555 CCDC174Q6PII3 467 aa18.86■□□□□ 0.61
PHRF1-201ENST00000264555 FANCBQ8NB91 859 aa18.86■□□□□ 0.61
PHRF1-201ENST00000264555 LZTFL1Q9NQ48 299 aa18.86■□□□□ 0.61
PHRF1-201ENST00000264555 KIAA1468Q9P260 1216 aa18.86■□□□□ 0.61
PHRF1-201ENST00000264555 FSD2A1L4K1 749 aa18.86■□□□□ 0.61
PHRF1-201ENST00000264555 HLTFQ14527 1009 aaKnown RBP eCLIP18.86■□□□□ 0.61
PHRF1-201ENST00000264555 USP37Q86T82 979 aa18.86■□□□□ 0.61
PHRF1-201ENST00000264555 NEK11Q8NG66 645 aa18.86■□□□□ 0.61
PHRF1-201ENST00000264555 GOLGA1Q92805 767 aa18.86■□□□□ 0.61
PHRF1-201ENST00000264555 VPS54Q9P1Q0 977 aa18.86■□□□□ 0.61
PHRF1-201ENST00000264555 USP21Q9UK80 565 aa18.86■□□□□ 0.61
PHRF1-201ENST00000264555 CCNT1O60563 726 aaKnown RBP18.86■□□□□ 0.61
PHRF1-201ENST00000264555 IGSF22Q8N9C0 903 aa18.86■□□□□ 0.61
PHRF1-201ENST00000264555 KIAA1210Q9ULL0 1709 aa18.86■□□□□ 0.61
PHRF1-201ENST00000264555 TRIM14Q14142 442 aa18.86■□□□□ 0.61
PHRF1-201ENST00000264555 KARSQ15046 597 aaKnown RBP18.86■□□□□ 0.61
PHRF1-201ENST00000264555 NONOQ15233 471 aaKnown RBP eCLIP18.86■□□□□ 0.614e-7■■■■□ 24.2
PHRF1-201ENST00000264555 CHAMP1Q96JM3 812 aa18.86■□□□□ 0.61
PHRF1-201ENST00000264555 SCLT1Q96NL6 688 aa18.86■□□□□ 0.61
PHRF1-201ENST00000264555 H7C1W4 665 aa18.85■□□□□ 0.61
PHRF1-201ENST00000264555 WDR78Q5VTH9 848 aa18.85■□□□□ 0.61
PHRF1-201ENST00000264555 SHTN1A0MZ66 631 aa18.85■□□□□ 0.61
PHRF1-201ENST00000264555 PFKFB1P16118 471 aa18.85■□□□□ 0.61
PHRF1-201ENST00000264555 NECTIN1Q15223 517 aa18.85■□□□□ 0.61
PHRF1-201ENST00000264555 TGFBRAP1Q8WUH2 860 aa18.85■□□□□ 0.61
PHRF1-201ENST00000264555 SYNRGQ9UMZ2 1314 aa18.85■□□□□ 0.61
PHRF1-201ENST00000264555 CYP27B1O15528 508 aa18.85■□□□□ 0.61
PHRF1-201ENST00000264555 IFFO1Q0D2I5 559 aa18.85■□□□□ 0.61
PHRF1-201ENST00000264555 UBE4AQ14139 1066 aa18.85■□□□□ 0.61
PHRF1-201ENST00000264555 MAPKAPK5Q8IW41 473 aa18.85■□□□□ 0.61
PHRF1-201ENST00000264555 SPATA31A3Q5VYP0 1347 aa18.85■□□□□ 0.61
PHRF1-201ENST00000264555 TTLL12Q14166 644 aaPredicted RBP18.85■□□□□ 0.61
PHRF1-201ENST00000264555 TICAM2Q86XR7 235 aa18.85■□□□□ 0.61
PHRF1-201ENST00000264555 CMA1P23946 247 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 CCT6AP40227 531 aaKnown RBP18.84■□□□□ 0.61
PHRF1-201ENST00000264555 PDE4DQ08499 809 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 FAM47AQ5JRC9 791 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 CNNM4Q6P4Q7 775 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 CCDC65Q8IXS2 484 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 FBXO18Q8NFZ0 1043 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 AXIN2Q9Y2T1 843 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 ERVV-1B6SEH8 477 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 CTR9Q6PD62 1173 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 NLRP10Q86W26 655 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 DNAI2Q9GZS0 605 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 NFE2L3Q9Y4A8 694 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 FAM13AO94988 1023 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 IGKV5-2P06315 115 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 TAOK3Q9H2K8 898 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 M0R2C6 588 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 ZNF569Q5MCW4 686 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 DPP8Q6V1X1 898 aaPredicted RBP18.84■□□□□ 0.61
PHRF1-201ENST00000264555 PAK1Q13153 545 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 PRPF4BQ13523 1007 aaKnown RBP18.84■□□□□ 0.61
PHRF1-201ENST00000264555 SDR42E1Q8WUS8 393 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.84■□□□□ 0.61
PHRF1-201ENST00000264555 GUCA1BQ9UMX6 200 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 V9GYY5 206 aaPredicted RBP18.84■□□□□ 0.61
PHRF1-201ENST00000264555 TNKSO95271 1327 aa18.84■□□□□ 0.61
PHRF1-201ENST00000264555 PCP11498 1178 aaKnown RBP18.83■□□□□ 0.61
PHRF1-201ENST00000264555 ARID4AP29374 1257 aaPredicted RBP18.83■□□□□ 0.61
PHRF1-201ENST00000264555 NRXN1Q9ULB1 1477 aa18.83■□□□□ 0.6
PHRF1-201ENST00000264555 HS2ST1Q7LGA3 356 aa18.83■□□□□ 0.6
PHRF1-201ENST00000264555 PCDHA7Q9UN72 937 aa18.83■□□□□ 0.6
PHRF1-201ENST00000264555 hCG_1642624A0A1W2PR95 340 aa18.83■□□□□ 0.6
PHRF1-201ENST00000264555 DCAF8L1A6NGE4 600 aa18.82■□□□□ 0.6
PHRF1-201ENST00000264555 EIF6P56537 245 aaKnown RBP18.82■□□□□ 0.6
PHRF1-201ENST00000264555 NSUN7Q8NE18 718 aaKnown RBP18.82■□□□□ 0.6
PHRF1-201ENST00000264555 BICD1Q96G01 975 aa18.82■□□□□ 0.6
PHRF1-201ENST00000264555 SH2D4AQ9H788 454 aa18.82■□□□□ 0.6
PHRF1-201ENST00000264555 GBP2P32456 591 aaPredicted RBP18.82■□□□□ 0.6
PHRF1-201ENST00000264555 ADD2P35612 726 aa18.82■□□□□ 0.6
PHRF1-201ENST00000264555 MPHOSPH6Q99547 160 aaKnown RBP18.82■□□□□ 0.6
PHRF1-201ENST00000264555 VPS16Q9H269 839 aa18.82■□□□□ 0.6
PHRF1-201ENST00000264555 GOPCQ9HD26 462 aa18.82■□□□□ 0.6
PHRF1-201ENST00000264555 ADCY7P51828 1080 aa18.82■□□□□ 0.6
PHRF1-201ENST00000264555 PIGBQ92521 554 aa18.82■□□□□ 0.6
PHRF1-201ENST00000264555 DRC1Q96MC2 740 aa18.82■□□□□ 0.6
PHRF1-201ENST00000264555 NOC4LQ9BVI4 516 aaKnown RBP18.82■□□□□ 0.6
PHRF1-201ENST00000264555 TXKP42681 527 aa18.81■□□□□ 0.6
PHRF1-201ENST00000264555 TBC1D8BQ0IIM8 1120 aa18.81■□□□□ 0.6
PHRF1-201ENST00000264555 RTEL1Q9NZ71 1219 aa18.81■□□□□ 0.6
PHRF1-201ENST00000264555 PNOCQ13519 176 aa18.81■□□□□ 0.6
PHRF1-201ENST00000264555 TERF1P54274 439 aa18.81■□□□□ 0.6
PHRF1-201ENST00000264555 SERTAD1Q9UHV2 236 aa18.81■□□□□ 0.6
PHRF1-201ENST00000264555 IQGAP1P46940 1657 aa18.81■□□□□ 0.6
PHRF1-201ENST00000264555 GOLGA6L7A0A1B0GV03 622 aa18.81■□□□□ 0.6
PHRF1-201ENST00000264555 A0A1W2PQ27 194 aa18.81■□□□□ 0.6
PHRF1-201ENST00000264555 A0A1W2PQ64 194 aa18.81■□□□□ 0.6
PHRF1-201ENST00000264555 A0A1W2PQD8 194 aa18.81■□□□□ 0.6
PHRF1-201ENST00000264555 BRINP3Q76B58 766 aa18.81■□□□□ 0.6
PHRF1-201ENST00000264555 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms