RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 ZNF112Q9UJU3 913 aa11.47□□□□□ -0.57
TTC39A-201ENST00000262675 KCNH4Q9UQ05 1017 aa11.47□□□□□ -0.57
TTC39A-201ENST00000262675 SALL1Q9NSC2 1324 aa11.46□□□□□ -0.57
TTC39A-201ENST00000262675 IRF6O14896 467 aa11.46□□□□□ -0.57
TTC39A-201ENST00000262675 CIAO1O76071 339 aa11.46□□□□□ -0.57
TTC39A-201ENST00000262675 NEK4P51957 841 aa11.46□□□□□ -0.57
TTC39A-201ENST00000262675 ERC1Q8IUD2 1116 aa11.46□□□□□ -0.57
TTC39A-201ENST00000262675 RHPN1Q8TCX5 695 aa11.46□□□□□ -0.57
TTC39A-201ENST00000262675 CNKSR2Q8WXI2 1034 aa11.46□□□□□ -0.57
TTC39A-201ENST00000262675 IQSEC3Q9UPP2 1182 aaPredicted RBP11.46□□□□□ -0.57
TTC39A-201ENST00000262675 SURF6O75683 361 aaKnown RBP11.45□□□□□ -0.58
TTC39A-201ENST00000262675 CLCN1P35523 988 aa11.45□□□□□ -0.58
TTC39A-201ENST00000262675 CDAN1Q8IWY9 1227 aa11.45□□□□□ -0.58
TTC39A-201ENST00000262675 SLF2Q8IX21 1173 aa11.45□□□□□ -0.58
TTC39A-201ENST00000262675 RILPL2Q969X0 211 aa11.45□□□□□ -0.58
TTC39A-201ENST00000262675 KIAA0100Q14667 2235 aaKnown RBP11.45□□□□□ -0.58
TTC39A-201ENST00000262675 CXCL11O14625 94 aa11.45□□□□□ -0.58
TTC39A-201ENST00000262675 MBD3O95983 291 aa11.45□□□□□ -0.58
TTC39A-201ENST00000262675 CCDC173Q0VFZ6 552 aa11.45□□□□□ -0.58
TTC39A-201ENST00000262675 GRIK5Q16478 980 aa11.45□□□□□ -0.58
TTC39A-201ENST00000262675 C17orf99Q6UX52 265 aa11.45□□□□□ -0.58
TTC39A-201ENST00000262675 ZKSCAN4Q969J2 545 aaPredicted RBP11.45□□□□□ -0.58
TTC39A-201ENST00000262675 TMX3Q96JJ7 454 aa11.45□□□□□ -0.58
TTC39A-201ENST00000262675 PARK7Q99497 189 aaKnown RBP11.45□□□□□ -0.58
TTC39A-201ENST00000262675 ANO2Q9NQ90 1003 aa11.45□□□□□ -0.58
TTC39A-201ENST00000262675 LMBRD1Q9NUN5 540 aa11.45□□□□□ -0.58
TTC39A-201ENST00000262675 DENND2AQ9ULE3 1009 aa11.45□□□□□ -0.58
TTC39A-201ENST00000262675 SRGAP3O43295 1099 aa11.44□□□□□ -0.58
TTC39A-201ENST00000262675 LDHBP07195 334 aaKnown RBP11.44□□□□□ -0.58
TTC39A-201ENST00000262675 HSPA4P34932 840 aa11.44□□□□□ -0.58
TTC39A-201ENST00000262675 CACNB3P54284 484 aa11.44□□□□□ -0.58
TTC39A-201ENST00000262675 FASTKD5Q7L8L6 764 aaKnown RBP11.44□□□□□ -0.58
TTC39A-201ENST00000262675 TRIM44Q96DX7 344 aaPredicted RBP11.44□□□□□ -0.58
TTC39A-201ENST00000262675 CEP126Q9P2H0 1117 aa11.44□□□□□ -0.58
TTC39A-201ENST00000262675 SRRDQ9UH36 339 aa11.44□□□□□ -0.58
TTC39A-201ENST00000262675 PDS5AQ29RF7 1337 aaKnown RBP11.44□□□□□ -0.58
TTC39A-201ENST00000262675 GLRX3O76003 335 aaKnown RBP11.44□□□□□ -0.58
TTC39A-201ENST00000262675 MCTP1Q6DN14 999 aa11.44□□□□□ -0.58
TTC39A-201ENST00000262675 RUFY2Q8WXA3 655 aa11.44□□□□□ -0.58
TTC39A-201ENST00000262675 GPATCH3Q96I76 525 aa11.44□□□□□ -0.58
TTC39A-201ENST00000262675 TRIM47Q96LD4 638 aa11.44□□□□□ -0.58
TTC39A-201ENST00000262675 SLC45A1Q9Y2W3 748 aa11.44□□□□□ -0.58
TTC39A-201ENST00000262675 PDHXO00330 501 aa11.43□□□□□ -0.58
TTC39A-201ENST00000262675 ENTPD3O75355 529 aa11.43□□□□□ -0.58
TTC39A-201ENST00000262675 UBXN2AP68543 259 aa11.43□□□□□ -0.58
TTC39A-201ENST00000262675 RAET1EQ8TD07 263 aa11.43□□□□□ -0.58
TTC39A-201ENST00000262675 PANK2Q9BZ23 570 aa11.43□□□□□ -0.58
TTC39A-201ENST00000262675 DAGLAQ9Y4D2 1042 aa11.43□□□□□ -0.58
TTC39A-201ENST00000262675 DOCK2Q92608 1830 aa11.43□□□□□ -0.58
TTC39A-201ENST00000262675 BRD1O95696 1058 aa11.43□□□□□ -0.58
TTC39A-201ENST00000262675 MAP4K4O95819 1239 aaPredicted RBP11.43□□□□□ -0.58
TTC39A-201ENST00000262675 PDIA4P13667 645 aaKnown RBP11.43□□□□□ -0.58
TTC39A-201ENST00000262675 IL15P40933 162 aaPredicted RBP11.43□□□□□ -0.58
TTC39A-201ENST00000262675 PSMC4P43686 418 aa11.43□□□□□ -0.58
TTC39A-201ENST00000262675 RFX5P48382 616 aaPredicted RBP11.43□□□□□ -0.58
TTC39A-201ENST00000262675 FCGRTP55899 365 aa11.43□□□□□ -0.58
TTC39A-201ENST00000262675 ATP2B3Q16720 1220 aa11.43□□□□□ -0.58
TTC39A-201ENST00000262675 SPTY2D1Q68D10 685 aaPredicted RBP11.43□□□□□ -0.58
TTC39A-201ENST00000262675 CDC42EP5Q6NZY7 148 aa11.43□□□□□ -0.58
TTC39A-201ENST00000262675 PI4K2BQ8TCG2 481 aa11.43□□□□□ -0.58
TTC39A-201ENST00000262675 PPP1R9BQ96SB3 815 aa11.43□□□□□ -0.58
TTC39A-201ENST00000262675 HTATIP2Q9BUP3 242 aa11.43□□□□□ -0.58
TTC39A-201ENST00000262675 RAD50Q92878 1312 aa11.42□□□□□ -0.58
TTC39A-201ENST00000262675 ADGRA2Q96PE1 1338 aa11.42□□□□□ -0.58
TTC39A-201ENST00000262675 SGSM2O43147 1006 aa11.42□□□□□ -0.58
TTC39A-201ENST00000262675 CAP1Q01518 475 aa11.42□□□□□ -0.58
TTC39A-201ENST00000262675 KIAA1211Q6ZU35 1233 aa11.42□□□□□ -0.58
TTC39A-201ENST00000262675 GAS2L3Q86XJ1 694 aa11.42□□□□□ -0.58
TTC39A-201ENST00000262675 CLASRPQ8N2M8 674 aaKnown RBP11.42□□□□□ -0.58
TTC39A-201ENST00000262675 SLAIN1Q8ND83 568 aa11.42□□□□□ -0.58
TTC39A-201ENST00000262675 IDI2Q9BXS1 227 aa11.42□□□□□ -0.58
TTC39A-201ENST00000262675 PICK1Q9NRD5 415 aa11.42□□□□□ -0.58
TTC39A-201ENST00000262675 HIP1O00291 1037 aa11.41□□□□□ -0.58
TTC39A-201ENST00000262675 FMNL1O95466 1100 aaPredicted RBP11.41□□□□□ -0.58
TTC39A-201ENST00000262675 INPP5BP32019 993 aa11.41□□□□□ -0.58
TTC39A-201ENST00000262675 GRK4P32298 578 aa11.41□□□□□ -0.58
TTC39A-201ENST00000262675 NASPP49321 788 aaPredicted RBP11.41□□□□□ -0.58
TTC39A-201ENST00000262675 HS1BP3Q53T59 392 aa11.41□□□□□ -0.58
TTC39A-201ENST00000262675 MIGA2Q7L4E1 593 aa11.41□□□□□ -0.58
TTC39A-201ENST00000262675 USP40Q9NVE5 1235 aa11.41□□□□□ -0.58
TTC39A-201ENST00000262675 MGAMO43451 1857 aa11.41□□□□□ -0.58
TTC39A-201ENST00000262675 MYPNQ86TC9 1320 aa11.41□□□□□ -0.58
TTC39A-201ENST00000262675 ATG9AQ7Z3C6 839 aa11.41□□□□□ -0.58
TTC39A-201ENST00000262675 KLHDC4Q8TBB5 520 aa11.41□□□□□ -0.58
TTC39A-201ENST00000262675 SH3TC2Q8TF17 1288 aa11.41□□□□□ -0.58
TTC39A-201ENST00000262675 SYAP1Q96A49 352 aaPredicted RBP11.41□□□□□ -0.58
TTC39A-201ENST00000262675 ARHGAP39Q9C0H5 1083 aa11.41□□□□□ -0.58
TTC39A-201ENST00000262675 RRAGDQ9NQL2 400 aaPredicted RBP11.41□□□□□ -0.58
TTC39A-201ENST00000262675 ZDHHC9Q9Y397 364 aa11.41□□□□□ -0.58
TTC39A-201ENST00000262675 MYH2Q9UKX2 1941 aa11.4□□□□□ -0.58
TTC39A-201ENST00000262675 GJB1P08034 283 aa11.4□□□□□ -0.58
TTC39A-201ENST00000262675 OSBPP22059 807 aa11.4□□□□□ -0.58
TTC39A-201ENST00000262675 SCYL3Q8IZE3 742 aa11.4□□□□□ -0.58
TTC39A-201ENST00000262675 FAM163AQ96GL9 167 aaPredicted RBP11.4□□□□□ -0.58
TTC39A-201ENST00000262675 CPA4Q9UI42 421 aa11.4□□□□□ -0.58
TTC39A-201ENST00000262675 AKAP2Q9Y2D5 859 aa11.4□□□□□ -0.58
TTC39A-201ENST00000262675 A0A0G2JLL6 359 aaPredicted RBP11.4□□□□□ -0.59
TTC39A-201ENST00000262675 ESPNB1AK53 854 aa11.4□□□□□ -0.59
TTC39A-201ENST00000262675 CTNND1O60716 968 aaKnown RBP11.4□□□□□ -0.59
TTC39A-201ENST00000262675 NPM3O75607 178 aaKnown RBP11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms