RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 TUBE1Q9UJT0 475 aa18.75■□□□□ 0.59
VSX2-201ENST00000261980 TMEM94Q12767 1356 aa18.74■□□□□ 0.59
VSX2-201ENST00000261980 GOLGA6CA6NDK9 693 aa18.74■□□□□ 0.59
VSX2-201ENST00000261980 GOLGA6DP0CG33 693 aa18.74■□□□□ 0.59
VSX2-201ENST00000261980 FXR1P51114 621 aaKnown RBP eCLIP18.74■□□□□ 0.59
VSX2-201ENST00000261980 ACTN3Q08043 901 aaPredicted RBP18.74■□□□□ 0.59
VSX2-201ENST00000261980 MAP9Q49MG5 647 aa18.74■□□□□ 0.59
VSX2-201ENST00000261980 ACBD3Q9H3P7 528 aa18.74■□□□□ 0.59
VSX2-201ENST00000261980 GOLGA6AQ9NYA3 693 aa18.74■□□□□ 0.59
VSX2-201ENST00000261980 MAN1B1Q9UKM7 699 aa18.74■□□□□ 0.59
VSX2-201ENST00000261980 IRAK1P51617 712 aa18.74■□□□□ 0.59
VSX2-201ENST00000261980 EXOSC10Q01780 885 aaKnown RBP18.74■□□□□ 0.59
VSX2-201ENST00000261980 HPCAL4Q9UM19 191 aa18.74■□□□□ 0.59
VSX2-201ENST00000261980 HSPD1P10809 573 aaKnown RBP18.73■□□□□ 0.59
VSX2-201ENST00000261980 CCDC148Q8NFR7 591 aa18.73■□□□□ 0.59
VSX2-201ENST00000261980 FAM76AQ8TAV0 307 aa18.73■□□□□ 0.59
VSX2-201ENST00000261980 MMS19Q96T76 1030 aa18.73■□□□□ 0.59
VSX2-201ENST00000261980 PSMB7Q99436 277 aa18.73■□□□□ 0.59
VSX2-201ENST00000261980 OVOS2A0A0J9YW53 1432 aa18.73■□□□□ 0.59
VSX2-201ENST00000261980 OVOS2Q6IE36 1432 aa18.73■□□□□ 0.59
VSX2-201ENST00000261980 ZNF185O15231 689 aa18.73■□□□□ 0.59
VSX2-201ENST00000261980 TNNI3KQ59H18 835 aa18.73■□□□□ 0.59
VSX2-201ENST00000261980 ATL3Q6DD88 541 aa18.73■□□□□ 0.59
VSX2-201ENST00000261980 GBP6Q6ZN66 633 aa18.73■□□□□ 0.59
VSX2-201ENST00000261980 SERTAD1Q9UHV2 236 aa18.73■□□□□ 0.59
VSX2-201ENST00000261980 FPGT-TNNI3KV9GXZ4 949 aa18.73■□□□□ 0.59
VSX2-201ENST00000261980 CDHR2Q9BYE9 1310 aa18.73■□□□□ 0.59
VSX2-201ENST00000261980 RNF225M0QZC1 329 aaPredicted RBP18.72■□□□□ 0.59
VSX2-201ENST00000261980 PRPF6O94906 941 aaKnown RBP18.72■□□□□ 0.59
VSX2-201ENST00000261980 SLC39A14Q15043 492 aa18.72■□□□□ 0.59
VSX2-201ENST00000261980 USP49Q70CQ1 688 aa18.72■□□□□ 0.59
VSX2-201ENST00000261980 NALCNQ8IZF0 1738 aa18.72■□□□□ 0.59
VSX2-201ENST00000261980 MED4Q9NPJ6 270 aa18.72■□□□□ 0.59
VSX2-201ENST00000261980 MYO6Q9UM54 1294 aa18.72■□□□□ 0.59
VSX2-201ENST00000261980 PDCLQ13371 301 aa18.72■□□□□ 0.59
VSX2-201ENST00000261980 WASHC4Q2M389 1173 aa18.72■□□□□ 0.59
VSX2-201ENST00000261980 MICU3Q86XE3 530 aa18.72■□□□□ 0.59
VSX2-201ENST00000261980 EEF2KMTQ96G04 330 aa18.72■□□□□ 0.59
VSX2-201ENST00000261980 ALG1Q9BT22 464 aa18.72■□□□□ 0.59
VSX2-201ENST00000261980 ATP5J2-PTCD1G3V325 749 aa18.72■□□□□ 0.59
VSX2-201ENST00000261980 PTCD1O75127 700 aaKnown RBP18.72■□□□□ 0.59
VSX2-201ENST00000261980 FKBP4Q02790 459 aaKnown RBP eCLIP18.72■□□□□ 0.59
VSX2-201ENST00000261980 SF3A3Q12874 501 aaKnown RBP eCLIP18.72■□□□□ 0.59
VSX2-201ENST00000261980 RNF187Q5TA31 235 aaPredicted RBP18.72■□□□□ 0.59
VSX2-201ENST00000261980 CAGE1Q8TC20 777 aa18.72■□□□□ 0.59
VSX2-201ENST00000261980 RRP36Q96EU6 259 aaKnown RBP18.72■□□□□ 0.59
VSX2-201ENST00000261980 PATL2C9JE40 543 aaKnown RBP18.71■□□□□ 0.59
VSX2-201ENST00000261980 POTEB2H3BUK9 544 aa18.71■□□□□ 0.59
VSX2-201ENST00000261980 PRC1O43663 620 aa18.71■□□□□ 0.59
VSX2-201ENST00000261980 KSR2Q6VAB6 950 aa18.71■□□□□ 0.59
VSX2-201ENST00000261980 CEP57Q86XR8 500 aa18.71■□□□□ 0.59
VSX2-201ENST00000261980 SH2D3CQ8N5H7 860 aa18.71■□□□□ 0.59
VSX2-201ENST00000261980 GIMAP7Q8NHV1 300 aa18.71■□□□□ 0.59
VSX2-201ENST00000261980 DBF4Q9UBU7 674 aaPredicted RBP18.71■□□□□ 0.59
VSX2-201ENST00000261980 GSCP56915 257 aaPredicted RBP18.71■□□□□ 0.59
VSX2-201ENST00000261980 CEP89Q96ST8 783 aa18.71■□□□□ 0.59
VSX2-201ENST00000261980 MYD88Q99836 296 aa18.71■□□□□ 0.59
VSX2-201ENST00000261980 GBP3Q9H0R5 595 aa18.71■□□□□ 0.59
VSX2-201ENST00000261980 DONSONQ9NYP3 566 aa18.71■□□□□ 0.59
VSX2-201ENST00000261980 IGSF1Q8N6C5 1336 aa18.71■□□□□ 0.59
VSX2-201ENST00000261980 HMGB1P09429 215 aaKnown RBP18.7■□□□□ 0.58
VSX2-201ENST00000261980 NUP88Q99567 741 aaPredicted RBP18.7■□□□□ 0.58
VSX2-201ENST00000261980 VPS16Q9H269 839 aa18.7■□□□□ 0.58
VSX2-201ENST00000261980 NKX2-3Q8TAU0 364 aa18.7■□□□□ 0.58
VSX2-201ENST00000261980 ANKARQ7Z5J8 1434 aa18.7■□□□□ 0.58
VSX2-201ENST00000261980 NDUFAB1O14561 156 aa18.69■□□□□ 0.58
VSX2-201ENST00000261980 SWT1Q5T5J6 900 aaKnown RBP18.69■□□□□ 0.58
VSX2-201ENST00000261980 CHP1Q99653 195 aa18.69■□□□□ 0.58
VSX2-201ENST00000261980 CAPS2Q9BXY5 557 aa18.69■□□□□ 0.58
VSX2-201ENST00000261980 NBPF3Q9H094 633 aa18.69■□□□□ 0.58
VSX2-201ENST00000261980 MAPK8IP1Q9UQF2 711 aa18.69■□□□□ 0.58
VSX2-201ENST00000261980 ATP2C2O75185 946 aa18.69■□□□□ 0.58
VSX2-201ENST00000261980 ERVK-24P63145 666 aa18.69■□□□□ 0.58
VSX2-201ENST00000261980 SLC7A5Q01650 507 aa18.69■□□□□ 0.58
VSX2-201ENST00000261980 POSTNQ15063 836 aa18.69■□□□□ 0.58
VSX2-201ENST00000261980 EZH2Q15910 746 aaKnown RBP18.69■□□□□ 0.58
VSX2-201ENST00000261980 UBE3BQ7Z3V4 1068 aa18.69■□□□□ 0.58
VSX2-201ENST00000261980 SENP2Q9HC62 589 aa18.69■□□□□ 0.58
VSX2-201ENST00000261980 NRKQ7Z2Y5 1582 aa18.69■□□□□ 0.58
VSX2-201ENST00000261980 SHTN1A0MZ66 631 aa18.69■□□□□ 0.58
VSX2-201ENST00000261980 ATP1A1P05023 1023 aaKnown RBP18.69■□□□□ 0.58
VSX2-201ENST00000261980 PPARAQ07869 468 aa18.69■□□□□ 0.58
VSX2-201ENST00000261980 KRT40Q6A162 431 aa18.69■□□□□ 0.58
VSX2-201ENST00000261980 SND1Q7KZF4 910 aaKnown RBP eCLIP18.69■□□□□ 0.58
VSX2-201ENST00000261980 CMTR1Q8N1G2 835 aaKnown RBP18.69■□□□□ 0.58
VSX2-201ENST00000261980 SELENOOQ9BVL4 669 aa18.69■□□□□ 0.58
VSX2-201ENST00000261980 GOLGA6BA6NDN3 693 aa18.68■□□□□ 0.58
VSX2-201ENST00000261980 AGPSO00116 658 aa18.68■□□□□ 0.58
VSX2-201ENST00000261980 CPP00450 1065 aa18.68■□□□□ 0.58
VSX2-201ENST00000261980 IGKV5-2P06315 115 aa18.68■□□□□ 0.58
VSX2-201ENST00000261980 ATP5JP18859 108 aa18.68■□□□□ 0.58
VSX2-201ENST00000261980 C2orf54Q08AI8 447 aa18.68■□□□□ 0.58
VSX2-201ENST00000261980 TTC39AQ5SRH9 613 aa18.68■□□□□ 0.58
VSX2-201ENST00000261980 CNPY4Q8N129 248 aa18.68■□□□□ 0.58
VSX2-201ENST00000261980 FLT4P35916 1363 aa18.68■□□□□ 0.58
VSX2-201ENST00000261980 SKAP2O75563 359 aaPredicted RBP18.68■□□□□ 0.58
VSX2-201ENST00000261980 SLC39A6Q13433 755 aa18.68■□□□□ 0.58
VSX2-201ENST00000261980 NR1I3Q14994 352 aa18.68■□□□□ 0.58
VSX2-201ENST00000261980 NUTM2AQ8IVF1 878 aaPredicted RBP18.68■□□□□ 0.58
VSX2-201ENST00000261980 N4BP2L2Q92802 583 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms