RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 CCAR1Q8IX12 1150 aaKnown RBP10.65□□□□□ -0.7
RPA1-201ENST00000254719 M0R2N6 131 aa10.65□□□□□ -0.7
RPA1-201ENST00000254719 NKRFO15226 690 aaKnown RBP eCLIP10.65□□□□□ -0.7
RPA1-201ENST00000254719 RBM6P78332 1123 aaKnown RBP10.65□□□□□ -0.7
RPA1-201ENST00000254719 RCSD1Q6JBY9 416 aa10.65□□□□□ -0.7
RPA1-201ENST00000254719 SDF4Q9BRK5 362 aa10.65□□□□□ -0.7
RPA1-201ENST00000254719 KCND1Q9NSA2 647 aa10.65□□□□□ -0.7
RPA1-201ENST00000254719 CDKL5O76039 1030 aa10.65□□□□□ -0.7
RPA1-201ENST00000254719 SARSP49591 514 aaKnown RBP10.65□□□□□ -0.7
RPA1-201ENST00000254719 CHRNDQ07001 517 aa10.65□□□□□ -0.7
RPA1-201ENST00000254719 NFXL1Q6ZNB6 911 aa10.65□□□□□ -0.7
RPA1-201ENST00000254719 LPIN2Q92539 896 aa10.65□□□□□ -0.7
RPA1-201ENST00000254719 CCDC47Q96A33 483 aaKnown RBP10.65□□□□□ -0.7
RPA1-201ENST00000254719 FAM84BQ96KN1 310 aaPredicted RBP10.65□□□□□ -0.7
RPA1-201ENST00000254719 TMX1Q9H3N1 280 aa10.65□□□□□ -0.7
RPA1-201ENST00000254719 ATP1A3P13637 1013 aa10.65□□□□□ -0.71
RPA1-201ENST00000254719 BARGINQ6ZT62 677 aa10.65□□□□□ -0.71
RPA1-201ENST00000254719 RASGRP2Q7LDG7 609 aa10.65□□□□□ -0.71
RPA1-201ENST00000254719 MYRIPQ8NFW9 859 aa10.65□□□□□ -0.71
RPA1-201ENST00000254719 TRMT112Q9UI30 125 aaKnown RBP10.65□□□□□ -0.71
RPA1-201ENST00000254719 A0A1W2PQ27 194 aa10.64□□□□□ -0.71
RPA1-201ENST00000254719 A0A1W2PQ64 194 aa10.64□□□□□ -0.71
RPA1-201ENST00000254719 A0A1W2PQD8 194 aa10.64□□□□□ -0.71
RPA1-201ENST00000254719 DPYDQ12882 1025 aa10.64□□□□□ -0.71
RPA1-201ENST00000254719 PUM3Q15397 648 aaKnown RBP10.64□□□□□ -0.71
RPA1-201ENST00000254719 STAG1Q8WVM7 1258 aa10.64□□□□□ -0.71
RPA1-201ENST00000254719 NOL10Q9BSC4 688 aaKnown RBP10.64□□□□□ -0.71
RPA1-201ENST00000254719 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.64□□□□□ -0.71
RPA1-201ENST00000254719 LONRF3Q496Y0 759 aa10.64□□□□□ -0.71
RPA1-201ENST00000254719 METTL24Q5JXM2 366 aa10.64□□□□□ -0.71
RPA1-201ENST00000254719 TTC39AQ5SRH9 613 aa10.64□□□□□ -0.71
RPA1-201ENST00000254719 SDR42E1Q8WUS8 393 aa10.64□□□□□ -0.71
RPA1-201ENST00000254719 ANAPC4Q9UJX5 808 aa10.64□□□□□ -0.71
RPA1-201ENST00000254719 ERICH4A6NGS2 130 aa10.64□□□□□ -0.71
RPA1-201ENST00000254719 PATL2C9JE40 543 aaKnown RBP10.64□□□□□ -0.71
RPA1-201ENST00000254719 FAM160A1Q05DH4 1040 aa10.64□□□□□ -0.71
RPA1-201ENST00000254719 RGS22Q8NE09 1264 aa10.64□□□□□ -0.71
RPA1-201ENST00000254719 ANKRD7Q92527 254 aa10.64□□□□□ -0.71
RPA1-201ENST00000254719 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.64□□□□□ -0.71
RPA1-201ENST00000254719 TNMDQ9H2S6 317 aa10.64□□□□□ -0.71
RPA1-201ENST00000254719 NMT2O60551 498 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 TSR1Q2NL82 804 aaKnown RBP10.63□□□□□ -0.71
RPA1-201ENST00000254719 E4F1Q66K89 784 aaPredicted RBP10.63□□□□□ -0.71
RPA1-201ENST00000254719 CCDC186Q7Z3E2 898 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 MAGEB6Q8N7X4 407 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 TEX13AQ9BXU3 409 aaPredicted RBP10.63□□□□□ -0.71
RPA1-201ENST00000254719 BRMS1Q9HCU9 246 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 LRRC4BQ9NT99 713 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 FBXO2Q9UK22 296 aaPredicted RBP10.63□□□□□ -0.71
RPA1-201ENST00000254719 ANGEL1Q9UNK9 670 aaKnown RBP10.63□□□□□ -0.71
RPA1-201ENST00000254719 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.63□□□□□ -0.71
RPA1-201ENST00000254719 MROH5Q6ZUA9 1318 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 LAMA3Q16787 3333 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 PRR29P0C7W0 189 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 PFKFB1P16118 471 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 GYG1P46976 350 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 DYNLL1P63167 89 aaKnown RBP10.63□□□□□ -0.71
RPA1-201ENST00000254719 SLC39A14Q15043 492 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 NT5DC1Q5TFE4 455 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 VPS37DQ86XT2 251 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 LRRC8AQ8IWT6 810 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 SYTL4Q96C24 671 aaPredicted RBP10.63□□□□□ -0.71
RPA1-201ENST00000254719 ZKSCAN3Q9BRR0 538 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 CCDC87Q9NVE4 849 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 MINPP1Q9UNW1 487 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 A0A0U1RQJ8 604 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 CTAGE5O15320 804 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 ZFYP08048 801 aaPredicted RBP10.63□□□□□ -0.71
RPA1-201ENST00000254719 TROAPQ12815 778 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 NR5A1Q13285 461 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 OLFM4Q6UX06 510 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 ATRIPQ8WXE1 791 aa10.63□□□□□ -0.71
RPA1-201ENST00000254719 STARD3NLO95772 234 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 CDC25BP30305 580 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 LIFRP42702 1097 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 SF3B3Q15393 1217 aaKnown RBP10.62□□□□□ -0.71
RPA1-201ENST00000254719 TPD52L1Q16890 204 aaPredicted RBP10.62□□□□□ -0.71
RPA1-201ENST00000254719 RESP18Q5W5W9 173 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 TYW1BQ6NUM6 668 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 TRIM5Q9C035 493 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 FAM53CQ9NYF3 392 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 SNED1Q8TER0 1413 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 MBD4O95243 580 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 FMR1Q06787 632 aaKnown RBP eCLIP10.62□□□□□ -0.713e-6■■■□□ 16.1
RPA1-201ENST00000254719 SLC10A5Q5PT55 438 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 FAM182BQ5T319 152 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 RASSF8Q8NHQ8 419 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 AK7Q96M32 723 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 IL17RBQ9NRM6 502 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 DDX19AQ9NUU7 478 aaKnown RBP10.62□□□□□ -0.71
RPA1-201ENST00000254719 KIAA1468Q9P260 1216 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 FBXO33Q7Z6M2 555 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 NACAP1Q9BZK3 213 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 ANKRD18BA2A2Z9 1011 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 ZNF165P49910 485 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 STK38Q15208 465 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 KRT40Q6A162 431 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 ZNF771Q7L3S4 317 aaPredicted RBP10.62□□□□□ -0.71
RPA1-201ENST00000254719 C4orf32Q8N8J7 132 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 ZFP91Q96JP5 570 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms