RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 WWC3Q9ULE0 1092 aa17.9■□□□□ 0.46
CTSD-201ENST00000236671 MORC2Q9Y6X9 1032 aaPredicted RBP17.9■□□□□ 0.46
CTSD-201ENST00000236671 ANKRD18BA2A2Z9 1011 aa17.9■□□□□ 0.46
CTSD-201ENST00000236671 ZBTB43O43298 467 aa17.9■□□□□ 0.46
CTSD-201ENST00000236671 ARID4AP29374 1257 aaPredicted RBP17.9■□□□□ 0.46
CTSD-201ENST00000236671 MYL5Q02045 173 aa17.9■□□□□ 0.46
CTSD-201ENST00000236671 PNOCQ13519 176 aa17.9■□□□□ 0.46
CTSD-201ENST00000236671 SGMS1Q86VZ5 419 aa17.9■□□□□ 0.46
CTSD-201ENST00000236671 AK7Q96M32 723 aa17.9■□□□□ 0.46
CTSD-201ENST00000236671 CCDC87Q9NVE4 849 aa17.9■□□□□ 0.46
CTSD-201ENST00000236671 UBN2Q6ZU65 1347 aa17.89■□□□□ 0.45
CTSD-201ENST00000236671 PHKA1P46020 1223 aa17.89■□□□□ 0.45
CTSD-201ENST00000236671 SLC15A2Q16348 729 aa17.89■□□□□ 0.45
CTSD-201ENST00000236671 METTL16Q86W50 562 aaKnown RBP17.89■□□□□ 0.45
CTSD-201ENST00000236671 DPF2Q92785 391 aa17.89■□□□□ 0.45
CTSD-201ENST00000236671 CLIC6Q96NY7 704 aa17.89■□□□□ 0.45
CTSD-201ENST00000236671 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.89■□□□□ 0.45
CTSD-201ENST00000236671 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.89■□□□□ 0.45
CTSD-201ENST00000236671 PDE8BO95263 885 aa17.89■□□□□ 0.45
CTSD-201ENST00000236671 STARD3NLO95772 234 aa17.89■□□□□ 0.45
CTSD-201ENST00000236671 IARSP41252 1262 aaKnown RBP17.89■□□□□ 0.45
CTSD-201ENST00000236671 GNL2Q13823 731 aaKnown RBP17.89■□□□□ 0.45
CTSD-201ENST00000236671 CCDC102BQ68D86 513 aa17.89■□□□□ 0.45
CTSD-201ENST00000236671 FBXO38Q6PIJ6 1188 aa17.89■□□□□ 0.45
CTSD-201ENST00000236671 STRBPQ96SI9 672 aaKnown RBP17.89■□□□□ 0.45
CTSD-201ENST00000236671 LRP5O75197 1615 aa17.88■□□□□ 0.45
CTSD-201ENST00000236671 MYH3P11055 1940 aa17.88■□□□□ 0.45
CTSD-201ENST00000236671 ANKRD36CQ5JPF3 1778 aa17.88■□□□□ 0.45
CTSD-201ENST00000236671 STK36Q9NRP7 1315 aa17.88■□□□□ 0.45
CTSD-201ENST00000236671 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.88■□□□□ 0.45
CTSD-201ENST00000236671 GOLGA8AA7E2F4 631 aa17.88■□□□□ 0.45
CTSD-201ENST00000236671 UBE2Q2LH0YL09 131 aa17.88■□□□□ 0.45
CTSD-201ENST00000236671 NRDCO43847 1150 aa17.88■□□□□ 0.45
CTSD-201ENST00000236671 CUTAO60888 179 aa17.88■□□□□ 0.45
CTSD-201ENST00000236671 SYT10Q6XYQ8 523 aa17.88■□□□□ 0.45
CTSD-201ENST00000236671 PNPLA7Q6ZV29 1317 aa17.88■□□□□ 0.45
CTSD-201ENST00000236671 ALX1Q15699 326 aa17.87■□□□□ 0.45
CTSD-201ENST00000236671 CCDC93Q567U6 631 aa17.87■□□□□ 0.45
CTSD-201ENST00000236671 TMEM67Q5HYA8 995 aa17.87■□□□□ 0.45
CTSD-201ENST00000236671 NFXL1Q6ZNB6 911 aa17.87■□□□□ 0.45
CTSD-201ENST00000236671 MYL10Q9BUA6 226 aa17.87■□□□□ 0.45
CTSD-201ENST00000236671 EPB41L4AQ9HCS5 686 aaPredicted RBP17.87■□□□□ 0.45
CTSD-201ENST00000236671 SRP68Q9UHB9 627 aaKnown RBP17.87■□□□□ 0.45
CTSD-201ENST00000236671 TAOK2Q9UL54 1235 aa17.87■□□□□ 0.45
CTSD-201ENST00000236671 TBC1D2BQ9UPU7 963 aa17.87■□□□□ 0.45
CTSD-201ENST00000236671 IRS4O14654 1257 aaPredicted RBP17.87■□□□□ 0.45
CTSD-201ENST00000236671 CBFA2T2O43439 604 aa17.87■□□□□ 0.45
CTSD-201ENST00000236671 UBASH3AP57075 661 aa17.87■□□□□ 0.45
CTSD-201ENST00000236671 LONRF3Q496Y0 759 aa17.87■□□□□ 0.45
CTSD-201ENST00000236671 KRBA2Q6ZNG9 492 aa17.87■□□□□ 0.45
CTSD-201ENST00000236671 INCENPQ9NQS7 918 aa17.87■□□□□ 0.45
CTSD-201ENST00000236671 TIAM2Q8IVF5 1701 aa17.87■□□□□ 0.45
CTSD-201ENST00000236671 ARAP2Q8WZ64 1704 aa17.87■□□□□ 0.45
CTSD-201ENST00000236671 CNTNAP4Q9C0A0 1308 aa17.86■□□□□ 0.45
CTSD-201ENST00000236671 TUBB4AP04350 444 aa17.86■□□□□ 0.45
CTSD-201ENST00000236671 UQCRFS1P1P0C7P4 283 aa17.86■□□□□ 0.45
CTSD-201ENST00000236671 LIFRP42702 1097 aa17.86■□□□□ 0.45
CTSD-201ENST00000236671 TRIM29Q14134 588 aa17.86■□□□□ 0.45
CTSD-201ENST00000236671 COL23A1Q86Y22 540 aaPredicted RBP17.86■□□□□ 0.45
CTSD-201ENST00000236671 FOXP4Q8IVH2 680 aaPredicted RBP17.86■□□□□ 0.45
CTSD-201ENST00000236671 VSTM4Q8IW00 320 aa17.86■□□□□ 0.45
CTSD-201ENST00000236671 AIDAQ96BJ3 306 aa17.86■□□□□ 0.45
CTSD-201ENST00000236671 TMX1Q9H3N1 280 aa17.86■□□□□ 0.45
CTSD-201ENST00000236671 KCNH3Q9ULD8 1083 aa17.86■□□□□ 0.45
CTSD-201ENST00000236671 NID2Q14112 1375 aa17.86■□□□□ 0.45
CTSD-201ENST00000236671 FAM53CQ9NYF3 392 aa17.86■□□□□ 0.45
CTSD-201ENST00000236671 TACC3Q9Y6A5 838 aa17.86■□□□□ 0.45
CTSD-201ENST00000236671 MYO1BO43795 1136 aa17.85■□□□□ 0.45
CTSD-201ENST00000236671 FMNL1O95466 1100 aaPredicted RBP17.85■□□□□ 0.45
CTSD-201ENST00000236671 SERPINC1P01008 464 aa17.85■□□□□ 0.45
CTSD-201ENST00000236671 OLFM4Q6UX06 510 aa17.85■□□□□ 0.45
CTSD-201ENST00000236671 LRRN4CLQ8ND94 238 aa17.85■□□□□ 0.45
CTSD-201ENST00000236671 ARHGEF1Q92888 912 aaKnown RBP17.85■□□□□ 0.45
CTSD-201ENST00000236671 SLC26A6Q9BXS9 759 aa17.85■□□□□ 0.45
CTSD-201ENST00000236671 KIF20AO95235 890 aa17.84■□□□□ 0.45
CTSD-201ENST00000236671 FGFR2P21802 821 aa17.84■□□□□ 0.45
CTSD-201ENST00000236671 BMP6P22004 513 aa17.84■□□□□ 0.45
CTSD-201ENST00000236671 GABPB1Q06547 395 aaPredicted RBP17.84■□□□□ 0.45
CTSD-201ENST00000236671 PUM3Q15397 648 aaKnown RBP17.84■□□□□ 0.45
CTSD-201ENST00000236671 CFAP100Q494V2 611 aa17.84■□□□□ 0.45
CTSD-201ENST00000236671 MSL1Q68DK7 614 aa17.84■□□□□ 0.45
CTSD-201ENST00000236671 NOSTRINQ8IVI9 506 aa17.84■□□□□ 0.45
CTSD-201ENST00000236671 IFNL3Q8IZI9 196 aa17.84■□□□□ 0.45
CTSD-201ENST00000236671 STK11IPQ8N1F8 1099 aa17.84■□□□□ 0.45
CTSD-201ENST00000236671 CNNM3Q8NE01 707 aa17.84■□□□□ 0.45
CTSD-201ENST00000236671 FANCLQ9NW38 375 aa17.84■□□□□ 0.45
CTSD-201ENST00000236671 STK32BQ9NY57 414 aa17.84■□□□□ 0.45
CTSD-201ENST00000236671 ZSWIM5Q9P217 1185 aa17.84■□□□□ 0.45
CTSD-201ENST00000236671 RTCBQ9Y3I0 505 aaKnown RBP17.84■□□□□ 0.45
CTSD-201ENST00000236671 PCDHA5Q9Y5H7 936 aa17.84■□□□□ 0.45
CTSD-201ENST00000236671 SLC12A7Q9Y666 1083 aa17.84■□□□□ 0.45
CTSD-201ENST00000236671 PHLPP2Q6ZVD8 1323 aa17.84■□□□□ 0.45
CTSD-201ENST00000236671 DOCK2Q92608 1830 aa17.84■□□□□ 0.45
CTSD-201ENST00000236671 PATL2C9JE40 543 aaKnown RBP17.84■□□□□ 0.45
CTSD-201ENST00000236671 TMEM232C9JQI7 657 aa17.84■□□□□ 0.45
CTSD-201ENST00000236671 IFIT3O14879 490 aaKnown RBP17.84■□□□□ 0.45
CTSD-201ENST00000236671 CCP110O43303 1012 aa17.84■□□□□ 0.45
CTSD-201ENST00000236671 ETF1P62495 437 aaKnown RBP17.84■□□□□ 0.45
CTSD-201ENST00000236671 MDM2Q00987 491 aaPredicted RBP17.84■□□□□ 0.45
CTSD-201ENST00000236671 CTDSPL2Q05D32 466 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms