RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 ARL1P40616 181 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-201ENST00000011700 TTC1Q99614 292 aa6.75□□□□□ -1.33
VPS13D-201ENST00000011700 KLHL14Q9P2G3 628 aa6.75□□□□□ -1.33
VPS13D-201ENST00000011700 BAG5Q9UL15 447 aa6.75□□□□□ -1.33
VPS13D-201ENST00000011700 CCDC169A6NNP5 214 aa6.75□□□□□ -1.33
VPS13D-201ENST00000011700 UBXN1Q04323 297 aa6.75□□□□□ -1.33
VPS13D-201ENST00000011700 VPS37BQ9H9H4 285 aa6.75□□□□□ -1.33
VPS13D-201ENST00000011700 SNRPA1P09661 255 aaKnown RBP6.74□□□□□ -1.33
VPS13D-201ENST00000011700 PRPF40BQ6NWY9 871 aaKnown RBP6.74□□□□□ -1.33
VPS13D-201ENST00000011700 CADPS2Q86UW7 1296 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 GGNBP2Q9H3C7 697 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 FGFR1OP2Q9NVK5 253 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 SPHKAPQ2M3C7 1700 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 TTI1O43156 1089 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 KRT10P13645 584 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 RSPH14Q9UHP6 348 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 BRPF3Q9ULD4 1205 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 MAD1L1Q9Y6D9 718 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 MINDY4BA8MYZ0 360 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 GOLGA8TH3BQL2 631 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 GOLGA8HP0CJ92 632 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 RLBP1P12271 317 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 LAD1O00515 517 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 FAM13AO94988 1023 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 KIFC2Q96AC6 838 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 CDCA7Q9BWT1 371 aaPredicted RBP6.74□□□□□ -1.33
VPS13D-201ENST00000011700 CABP2Q9NPB3 220 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 GEN1Q17RS7 908 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 CCPG1Q9ULG6 757 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 SYCP2Q9BX26 1530 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 SPECC1L-ADORA2AF8WAN1 911 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 HSPA6P17066 643 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 CBX1P83916 185 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 PROSER2Q86WR7 435 aaPredicted RBP6.74□□□□□ -1.33
VPS13D-201ENST00000011700 MICALL1Q8N3F8 863 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 NGLY1Q96IV0 654 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 IGBP1P78318 339 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 TBC1D9Q6ZT07 1266 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 AGTPBP1Q9UPW5 1226 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 GOLGA8JA6NMD2 632 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 LMNAP02545 664 aaKnown RBP6.74□□□□□ -1.33
VPS13D-201ENST00000011700 NAA25Q14CX7 972 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 ANO6Q4KMQ2 910 aa6.74□□□□□ -1.33
VPS13D-201ENST00000011700 SH3BP5O60239 455 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 MAP3K7CLP57077 242 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 TYRO3Q06418 890 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 RETREG2Q8NC44 543 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 IPO4Q8TEX9 1081 aaKnown RBP6.73□□□□□ -1.33
VPS13D-201ENST00000011700 GBP5Q96PP8 586 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 TEX12Q9BXU0 123 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 CAMSAP1Q5T5Y3 1602 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 POLR3AO14802 1390 aaPredicted RBP6.73□□□□□ -1.33
VPS13D-201ENST00000011700 CITO14578 2027 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 CDC42BPBQ9Y5S2 1711 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 ATP5HO75947 161 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 IDEP14735 1019 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 RBM42Q9BTD8 480 aaKnown RBP6.73□□□□□ -1.33
VPS13D-201ENST00000011700 RNF8O76064 485 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 SV2BQ7L1I2 683 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 CUEDC2Q9H467 287 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 HELLSQ9NRZ9 838 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 FAM69CQ0P6D2 419 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 HELBQ8NG08 1087 aaPredicted RBP6.73□□□□□ -1.33
VPS13D-201ENST00000011700 FAM204AQ9H8W3 233 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 RNF216Q9NWF9 866 aaPredicted RBP6.73□□□□□ -1.33
VPS13D-201ENST00000011700 DNAI1Q9UI46 699 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 NUTM2BA6NNL0 878 aaPredicted RBP6.73□□□□□ -1.33
VPS13D-201ENST00000011700 NUTM2EB1AL46 878 aaPredicted RBP6.73□□□□□ -1.33
VPS13D-201ENST00000011700 EFCAB14O75071 495 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 MAP2K2P36507 400 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 PSPC1Q8WXF1 523 aaKnown RBP6.73□□□□□ -1.33
VPS13D-201ENST00000011700 USP16Q9Y5T5 823 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 DEXIO95424 95 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 SLC12A2P55011 1212 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 PLCB3Q01970 1234 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 RAB3GAP1Q15042 981 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 ABCC1P33527 1531 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 GOLGA8KD6RF30 607 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 PSMA4P25789 261 aaKnown RBP6.73□□□□□ -1.33
VPS13D-201ENST00000011700 SAMD1Q6SPF0 538 aaPredicted RBP6.73□□□□□ -1.33
VPS13D-201ENST00000011700 MYCBPQ99417 103 aaPredicted RBP6.73□□□□□ -1.33
VPS13D-201ENST00000011700 SLC5A4Q9NY91 659 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 MYL6BP14649 208 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 MAP3K10Q02779 954 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 CCDC122Q5T0U0 273 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 APLFQ8IW19 511 aaPredicted RBP6.73□□□□□ -1.33
VPS13D-201ENST00000011700 ABCC5O15440 1437 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 ELMSAN1Q6PJG2 1045 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 TBC1D2Q9BYX2 928 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 NDE1Q9NXR1 346 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 CD2APQ9Y5K6 639 aa6.73□□□□□ -1.33
VPS13D-201ENST00000011700 URB2Q14146 1524 aaKnown RBP6.73□□□□□ -1.33
VPS13D-201ENST00000011700 F13A1P00488 732 aa6.72□□□□□ -1.33
VPS13D-201ENST00000011700 ERCC3P19447 782 aa6.72□□□□□ -1.33
VPS13D-201ENST00000011700 ASIC1P78348 528 aa6.72□□□□□ -1.33
VPS13D-201ENST00000011700 BIN2Q9UBW5 565 aaPredicted RBP6.72□□□□□ -1.33
VPS13D-201ENST00000011700 NUTM2FA1L443 756 aa6.72□□□□□ -1.33
VPS13D-201ENST00000011700 NR1H3Q13133 447 aa6.72□□□□□ -1.33
VPS13D-201ENST00000011700 DHX32Q7L7V1 743 aaKnown RBP6.72□□□□□ -1.33
VPS13D-201ENST00000011700 SPATS2LQ9NUQ6 558 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms