RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Iqca1Q9CUL5 857 aa10.99□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Stxbp4Q9WV89 557 aa10.99□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Ktn1Q61595 1327 aaKnown RBP10.99□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Zscan25B2RX31 543 aa10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Aknad1E9Q8N6 675 aa10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Rrp1P56183 494 aaKnown RBP10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Rbm19Q8R3C6 952 aaKnown RBP10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Mmel1Q9JLI3 765 aa10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Heg1E9Q7X6 1337 aa10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Ano3A2AHL1 981 aa10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Spata5Q3UMC0 893 aaKnown RBP10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Ckap2Q3V1H1 664 aa10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Prpf38aQ4FK66 312 aaKnown RBP10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Stk39Q9Z1W9 556 aa10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Tpm2P58774 284 aa10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Xrcc4Q924T3 326 aa10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Dapk3O54784 448 aa10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Rad23bP54728 416 aa10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Usp5P56399 858 aaKnown RBP10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Cfap157Q0VFX2 523 aa10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 MycbpapQ5SUV2 932 aa10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Tbc1d23Q8K0F1 684 aa10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Nop14Q8R3N1 860 aaKnown RBP10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Krt23Q99PS0 422 aa10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Lmbr1Q9JIT0 490 aa10.98□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 CpdO89001 1377 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Prss40A6H6T1 365 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Gpatch11Q3UFS4 262 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Ttc27Q8CD92 847 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 HibadhQ99L13 335 aaKnown RBP10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Pla2g12bQ99P27 195 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Tfcp2Q9ERA0 502 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Sall1Q9ER74 1322 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Zscan29E9Q5B4 869 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Tpm3P21107 285 aaKnown RBP10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 VrtnQ3SYK4 740 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Esyt2Q3TZZ7 845 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Slc27a1Q60714 646 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Atp2b4Q6Q477 1205 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Tcp11l1Q8BTG3 509 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Sec62Q8BU14 398 aaKnown RBP10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Gimap7Q8R379 293 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Lonrf3Q9D4H7 753 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Sel1lQ9Z2G6 790 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 A0A1L1SQF0 893 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Ccng2O08918 344 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 GnaqP21279 359 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Nap1l2P51860 460 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Tmed8Q3UHI4 326 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Ranbp6Q8BIV3 1105 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 WaslQ91YD9 501 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Ttc5Q99LG4 440 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Rbm6S4R1W5 1118 aaKnown RBP10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Duox1A2AQ92 1551 aa10.97□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Gm3893E9Q1I1 302 aa10.96□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Bach1P97302 739 aa10.96□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Fam198bQ3UPI1 517 aa10.96□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Mum1l1Q4VA55 681 aa10.96□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Vps37dQ810I0 261 aa10.96□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Mrps25Q9D125 171 aaKnown RBP10.96□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Kcnn1Q9EQR3 537 aa10.96□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Add3Q9QYB5 706 aaKnown RBP10.96□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Bin1O08539 588 aaKnown RBP10.96□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Mtx1P47802 317 aa10.96□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Luzp1Q8R4U7 1068 aaKnown RBP10.96□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Dynll2Q9D0M5 89 aa10.96□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Telo2Q9DC40 840 aaKnown RBP10.96□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Llgl2Q3TJ91 1027 aa10.96□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Hvcn1Q3U2S8 269 aa10.96□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Nop2Q922K7 793 aaKnown RBP10.96□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Naaladl2A0A0N4SUJ3 795 aa10.95□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 1700013D24RikQ0P521 120 aa10.95□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Q8C6G1 249 aa10.95□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Zfp202Q8C879 641 aa10.95□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Rgs12Q8CGE9 1381 aa10.95□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 A0A1Y7VML8 143 aa10.95□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Api5O35841 504 aaKnown RBP10.95□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 DnttP09838 530 aa10.95□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Cep120Q7TSG1 988 aa10.95□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Epb41l3Q9WV92 929 aa10.95□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Nhsl1Q8CAF4 1587 aa10.95□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Cfap44E9Q5M6 1843 aa10.95□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Gm43638A0A0J9YU36 694 aa10.95□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Bnip3O55003 187 aa10.95□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Nmt2O70311 529 aa10.95□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Ankrd13aQ80UP5 588 aa10.95□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 MlphQ91V27 590 aa10.95□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Pramel6Q810Y9 485 aa10.95□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 CerkQ8K4Q7 531 aa10.95□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Znfx1Q8R151 1909 aaKnown RBP10.94□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Tcof1O08784 1320 aaKnown RBP10.94□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Pfkfb1P70266 471 aa10.94□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Stac3Q8BZ71 360 aa10.94□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Vps16Q920Q4 839 aa10.94□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Prpf3Q922U1 683 aaKnown RBP10.94□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Plekhg2Q6KAU7 1340 aa10.94□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Usp53P15975 1069 aa10.94□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 RdxP26043 583 aaKnown RBP10.94□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Ift122Q6NWV3 1182 aa10.94□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Hps3Q91VB4 1002 aa10.94□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms