RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Prkag3Q8BGM7 489 aa14.09□□□□□ -0.15
Vamp1-203ENSMUST00000100942 Frat2Q8K025 231 aa14.09□□□□□ -0.15
Vamp1-203ENSMUST00000100942 Paf1Q8K2T8 535 aa14.09□□□□□ -0.15
Vamp1-203ENSMUST00000100942 Bap1Q99PU7 728 aa14.09□□□□□ -0.15
Vamp1-203ENSMUST00000100942 Myh6Q02566 1938 aaKnown RBP14.08□□□□□ -0.15
Vamp1-203ENSMUST00000100942 A0A1W2P7S8 802 aa14.08□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Dnajc25A2ALW5 357 aa14.08□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Ppp1r21Q3TDD9 780 aa14.08□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Cdkl5Q3UTQ8 938 aa14.08□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Cdc5lQ6A068 802 aaKnown RBP14.08□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Slitrk3Q810B9 980 aa14.08□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Lrrc2Q8VDB8 371 aa14.08□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Telo2Q9DC40 840 aaKnown RBP14.08□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Elf2Q9JHC9 593 aa14.08□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Col11a2Q64739 1736 aa14.08□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Kif3cO35066 796 aa14.08□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Foxp1P58462 705 aa14.08□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Tlr8P58682 1032 aa14.08□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Ttc12Q8BW49 704 aa14.08□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Efcc1Q9JJF6 558 aa14.08□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Pramel3A2AHA7 463 aa14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Gm7903A2AWL1 463 aa14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 AV320801A2AWL3 467 aa14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Gm15023L7MUB4 467 aa14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Spata5Q3UMC0 893 aaKnown RBP14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Olfr118Q7TRJ6 321 aa14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Otop3Q80UF9 577 aa14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Cdca8Q8BHX3 289 aa14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Srek1Q8BZX4 494 aaKnown RBP14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Dock5B2RY04 1868 aa14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Aox4Q3TYQ9 1336 aa14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Lrrc8aQ80WG5 810 aa14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Acnat2Q8BGG9 420 aa14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Hook1Q8BIL5 728 aa14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Sec62Q8BU14 398 aaKnown RBP14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 CerkQ8K4Q7 531 aa14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Cnpy3Q9DAU1 276 aa14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Aox3G3X982 1335 aa14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Surf1P09925 306 aa14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 H2afxP27661 143 aaKnown RBP14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Gm28047Q3US59 414 aa14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 MlphQ91V27 590 aa14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Ccer1Q9CQL2 403 aa14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Iqca1Q9CUL5 857 aa14.07□□□□□ -0.16
Vamp1-203ENSMUST00000100942 HelbQ6NVF4 1074 aa14.06□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Znf532Q6NXK2 1036 aa14.06□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Drc7Q6V3W6 876 aa14.06□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Dnaaf2Q8BPI1 814 aa14.06□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Terb1Q8C0V1 768 aa14.06□□□□□ -0.16
Vamp1-203ENSMUST00000100942 BbxQ8VBW5 907 aa14.06□□□□□ -0.16
Vamp1-203ENSMUST00000100942 1700018B08RikQ9DA83 213 aa14.06□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Rai14Q9EP71 979 aaKnown RBP14.06□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Tnni2P13412 182 aa14.06□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Gm5592Q3V0A6 857 aa14.06□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Cfap69Q8BH53 942 aa14.06□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Rnf41Q8BH75 317 aa14.06□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Yeats4Q9CR11 227 aaKnown RBP14.06□□□□□ -0.16
Vamp1-203ENSMUST00000100942 WtapQ9ER69 396 aa14.06□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Dusp10Q9ESS0 483 aa14.06□□□□□ -0.16
Vamp1-203ENSMUST00000100942 EcsitQ9QZH6 435 aa14.06□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Letm1Q9Z2I0 738 aa14.06□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Tcof1O08784 1320 aaKnown RBP14.05□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Atp2b1G5E829 1220 aa14.05□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Slurp2P0DP59 97 aa14.05□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Rrp1P56183 494 aaKnown RBP14.05□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Cplx2P84086 134 aa14.05□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Fam83bQ0VBM2 1012 aa14.05□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Ube2oQ6ZPJ3 1288 aa14.05□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Gpatch3Q8BIY1 525 aa14.05□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Pnpla6Q3TRM4 1355 aa14.05□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Ly75Q60767 1723 aa14.05□□□□□ -0.16
Vamp1-203ENSMUST00000100942 GalcP54818 684 aa14.05□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Sec23aQ01405 765 aa14.05□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Kcnd1Q03719 651 aa14.05□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Atxn2lQ7TQH0 1049 aaKnown RBP14.05□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Adgra3Q7TT36 1310 aa14.05□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Prss40A6H6T1 365 aa14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Clec11aO88200 328 aa14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Dnm1P39053 867 aa14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Glis3Q6XP49 780 aa14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Wdr3Q8BHB4 942 aaKnown RBP14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Slc14a2Q8R4T9 930 aa14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Hps3Q91VB4 1002 aa14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Pla2g12bQ99P27 195 aa14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Golga5Q9QYE6 729 aa14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Sh3tc1G3X9F6 1346 aa14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Zbtb21E9Q444 1094 aa14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Sptlc2P97363 560 aaKnown RBP14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Epha2Q03145 977 aa14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Rtel1Q0VGM9 1203 aa14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Ctr9Q62018 1173 aaKnown RBP14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Ehd2Q8BH64 543 aa14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Stk38Q91VJ4 465 aa14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 CebpaP53566 359 aa14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 PcQ05920 1178 aa14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 SfswapQ3USH5 945 aaKnown RBP14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Q66JV7 365 aa14.04□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Rassf4Q8CB96 322 aa14.03□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Tulp1Q9Z273 543 aa14.03□□□□□ -0.16
Vamp1-203ENSMUST00000100942 A0A0U1RNP2 1173 aa14.03□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms