RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 CDH23Q9H251 3354 aa0.46□□□□□ -2.34
CHRNA4-220ENST00000637628 SPRR2EP22531 72 aa0.46□□□□□ -2.34
CHRNA4-220ENST00000637628 GOLGB1Q14789 3259 aaKnown RBP0.46□□□□□ -2.34
CHRNA4-220ENST00000637628 SVEP1Q4LDE5 3571 aa0.46□□□□□ -2.34
CHRNA4-220ENST00000637628 FLGP20930 4061 aaPredicted RBP0.45□□□□□ -2.34
CHRNA4-220ENST00000637628 LAMA1P25391 3075 aa0.45□□□□□ -2.34
CHRNA4-220ENST00000637628 CSMD2Q7Z408 3487 aa0.45□□□□□ -2.34
CHRNA4-220ENST00000637628 CENPEQ02224 2701 aa0.44□□□□□ -2.34
CHRNA4-220ENST00000637628 MUC16Q8WXI7 14507 aa0.44□□□□□ -2.34
CHRNA4-220ENST00000637628 MAP1AP78559 2803 aaPredicted RBP0.44□□□□□ -2.34
CHRNA4-220ENST00000637628 DEFB136Q30KP8 78 aa0.44□□□□□ -2.34
CHRNA4-220ENST00000637628 KRTAP19-5Q3LI72 72 aa0.44□□□□□ -2.34
CHRNA4-220ENST00000637628 SPRR2FQ96RM1 72 aa0.44□□□□□ -2.34
CHRNA4-220ENST00000637628 TRIOO75962 3097 aa0.44□□□□□ -2.34
CHRNA4-220ENST00000637628 FRYLO94915 3013 aa0.44□□□□□ -2.34
CHRNA4-220ENST00000637628 MGAQ8IWI9 3026 aa0.44□□□□□ -2.34
CHRNA4-220ENST00000637628 FAT3Q8TDW7 4589 aa0.43□□□□□ -2.34
CHRNA4-220ENST00000637628 APELAP0DMC3 54 aa0.43□□□□□ -2.34
CHRNA4-220ENST00000637628 HTN1P15515 57 aa0.43□□□□□ -2.34
CHRNA4-220ENST00000637628 DEFB1P60022 68 aa0.43□□□□□ -2.34
CHRNA4-220ENST00000637628 VPS13CQ709C8 3753 aa0.43□□□□□ -2.34
CHRNA4-220ENST00000637628 DNAH7Q8WXX0 4024 aa0.42□□□□□ -2.34
CHRNA4-220ENST00000637628 SYNE1Q8NF91 8797 aaKnown RBP0.42□□□□□ -2.34
CHRNA4-220ENST00000637628 DNAH6Q9C0G6 4158 aa0.41□□□□□ -2.34
CHRNA4-220ENST00000637628 LRP1BQ9NZR2 4599 aa0.4□□□□□ -2.34
CHRNA4-220ENST00000637628 DNAH8Q96JB1 4490 aa0.4□□□□□ -2.35
CHRNA4-220ENST00000637628 DEFB124Q8NES8 71 aa0.39□□□□□ -2.35
CHRNA4-220ENST00000637628 ADGRG4Q8IZF6 3080 aa0.39□□□□□ -2.35
CHRNA4-220ENST00000637628 LAMA5O15230 3695 aa0.38□□□□□ -2.35
CHRNA4-220ENST00000637628 DEFB133Q30KQ1 61 aa0.38□□□□□ -2.35
CHRNA4-220ENST00000637628 DNAH9Q9NYC9 4486 aa0.37□□□□□ -2.35
CHRNA4-220ENST00000637628 AKAP9Q99996 3911 aa0.37□□□□□ -2.35
CHRNA4-220ENST00000637628 ATMQ13315 3056 aa0.36□□□□□ -2.35
CHRNA4-220ENST00000637628 PRUNE2Q8WUY3 3088 aa0.36□□□□□ -2.35
CHRNA4-220ENST00000637628 FAT1Q14517 4588 aa0.35□□□□□ -2.35
CHRNA4-220ENST00000637628 DNAH1Q9P2D7 4330 aa0.35□□□□□ -2.35
CHRNA4-220ENST00000637628 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
CHRNA4-220ENST00000637628 APOBP04114 4563 aaKnown RBP0.34□□□□□ -2.36
CHRNA4-220ENST00000637628 PKHD1P08F94 4074 aa0.33□□□□□ -2.36
CHRNA4-220ENST00000637628 LRP2P98164 4655 aa0.32□□□□□ -2.36
CHRNA4-220ENST00000637628 DYNC1H1Q14204 4646 aaKnown RBP0.3□□□□□ -2.36
CHRNA4-220ENST00000637628 STARD9Q9P2P6 4700 aa0.3□□□□□ -2.36
CHRNA4-220ENST00000637628 MT1HP80294 61 aa0.29□□□□□ -2.36
CHRNA4-220ENST00000637628 DNAH10Q8IVF4 4471 aa0.28□□□□□ -2.36
CHRNA4-220ENST00000637628 CD52P31358 61 aa0.27□□□□□ -2.37
CHRNA4-220ENST00000637628 RPS29P62273 56 aaKnown RBP0.27□□□□□ -2.37
CHRNA4-220ENST00000637628 CMYA5Q8N3K9 4069 aa0.27□□□□□ -2.37
CHRNA4-220ENST00000637628 DMDP11532 3685 aa0.26□□□□□ -2.37
CHRNA4-220ENST00000637628 A0A096LPF7 62 aa0.26□□□□□ -2.37
CHRNA4-220ENST00000637628 MT1EP04732 61 aa0.26□□□□□ -2.37
CHRNA4-220ENST00000637628 SPRR2GQ9BYE4 73 aa0.25□□□□□ -2.37
CHRNA4-220ENST00000637628 PLECQ15149 4684 aaKnown RBP0.23□□□□□ -2.37
CHRNA4-220ENST00000637628 DEFB4AO15263 64 aa0.23□□□□□ -2.37
CHRNA4-220ENST00000637628 KRTAP19-6Q3LI70 58 aa0.22□□□□□ -2.37
CHRNA4-220ENST00000637628 LINC01556Q5JQF7 62 aa0.21□□□□□ -2.38
CHRNA4-220ENST00000637628 MT1LQ93083 61 aa0.21□□□□□ -2.38
CHRNA4-220ENST00000637628 STATHP02808 62 aa0.2□□□□□ -2.38
CHRNA4-220ENST00000637628 DNAH5Q8TE73 4624 aa0.2□□□□□ -2.38
CHRNA4-220ENST00000637628 DEFB108BQ8NET1 73 aa0.19□□□□□ -2.38
CHRNA4-220ENST00000637628 TRRAPQ9Y4A5 3859 aa0.18□□□□□ -2.38
CHRNA4-220ENST00000637628 Q9Y3F1 56 aa0.18□□□□□ -2.38
CHRNA4-220ENST00000637628 KRTAP19-7Q3SYF9 63 aa0.17□□□□□ -2.38
CHRNA4-220ENST00000637628 MT4P47944 62 aa0.16□□□□□ -2.38
CHRNA4-220ENST00000637628 MT1XP80297 61 aa0.16□□□□□ -2.38
CHRNA4-220ENST00000637628 DNAH17Q9UFH2 4485 aa0.14□□□□□ -2.39
CHRNA4-220ENST00000637628 KRTAP19-8Q3LI54 63 aa0.13□□□□□ -2.39
CHRNA4-220ENST00000637628 MUC17Q685J3 4493 aa0.11□□□□□ -2.39
CHRNA4-220ENST00000637628 HTN3P15516 51 aa0.07□□□□□ -2.4
CHRNA4-220ENST00000637628 MT1GP13640 62 aa0.06□□□□□ -2.4
CHRNA4-220ENST00000637628 KRTAP6-1Q3LI64 71 aa0.05□□□□□ -2.4
CHRNA4-220ENST00000637628 COX14Q96I36 57 aa0.04□□□□□ -2.4
CHRNA4-220ENST00000637628 KRTAP20-2Q3LI61 65 aa0.03□□□□□ -2.4
CHRNA4-220ENST00000637628 MT2AP02795 61 aa-0.01□□□□□ -2.41
CHRNA4-220ENST00000637628 MT1MQ8N339 61 aa-0.02□□□□□ -2.41
CHRNA4-220ENST00000637628 MT1HL1P0DM35 61 aa-0.03□□□□□ -2.41
CHRNA4-220ENST00000637628 MT1BP07438 61 aa-0.18□□□□□ -2.44
CHRNA4-220ENST00000637628 MT1FP04733 61 aa-0.22□□□□□ -2.44
CHRNA4-220ENST00000637628 KRTAP19-2Q3LHN2 52 aa-0.27□□□□□ -2.45
Retrieved 78 of 20,778 RNA–protein pairs in 94.7 ms