RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 KRTAP6-2Q3LI66 62 aa0.58□□□□□ -2.32
LRRC39-204ENST00000620882 TRRAPQ9Y4A5 3859 aa0.58□□□□□ -2.32
LRRC39-204ENST00000620882 SPRR2DP22532 72 aa0.57□□□□□ -2.32
LRRC39-204ENST00000620882 LPAP08519 4548 aa0.57□□□□□ -2.32
LRRC39-204ENST00000620882 LRP2P98164 4655 aa0.56□□□□□ -2.32
LRRC39-204ENST00000620882 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
LRRC39-204ENST00000620882 ITPR2Q14571 2701 aa0.56□□□□□ -2.32
LRRC39-204ENST00000620882 SPART-AS1P0CW21 52 aa0.56□□□□□ -2.32
LRRC39-204ENST00000620882 DEFB108AA8MXU0 73 aa0.56□□□□□ -2.32
LRRC39-204ENST00000620882 TMEM167AQ8TBQ9 72 aa0.56□□□□□ -2.32
LRRC39-204ENST00000620882 PLECQ15149 4684 aaKnown RBP0.55□□□□□ -2.32
LRRC39-204ENST00000620882 VPS13CQ709C8 3753 aa0.55□□□□□ -2.32
LRRC39-204ENST00000620882 ASPMQ8IZT6 3477 aa0.54□□□□□ -2.32
LRRC39-204ENST00000620882 A0A096LNI7 61 aa0.52□□□□□ -2.33
LRRC39-204ENST00000620882 DEFB1P60022 68 aa0.52□□□□□ -2.33
LRRC39-204ENST00000620882 KRTAP8-1Q8IUC2 63 aa0.52□□□□□ -2.33
LRRC39-204ENST00000620882 UNC80Q8N2C7 3258 aa0.51□□□□□ -2.33
LRRC39-204ENST00000620882 MYO15AQ9UKN7 3530 aa0.5□□□□□ -2.33
LRRC39-204ENST00000620882 SMR3BP02814 79 aaPredicted RBP0.5□□□□□ -2.33
LRRC39-204ENST00000620882 LOC400499M0QZD8 3231 aa0.49□□□□□ -2.33
LRRC39-204ENST00000620882 USP34Q70CQ2 3546 aa0.49□□□□□ -2.33
LRRC39-204ENST00000620882 UTRNP46939 3433 aa0.49□□□□□ -2.33
LRRC39-204ENST00000620882 DNAH17Q9UFH2 4485 aa0.49□□□□□ -2.33
LRRC39-204ENST00000620882 APELAP0DMC3 54 aa0.48□□□□□ -2.33
LRRC39-204ENST00000620882 SPRR2BP35325 72 aa0.48□□□□□ -2.33
LRRC39-204ENST00000620882 DEFB136Q30KP8 78 aa0.47□□□□□ -2.33
LRRC39-204ENST00000620882 KRTAP19-5Q3LI72 72 aa0.47□□□□□ -2.33
LRRC39-204ENST00000620882 PKHD1P08F94 4074 aa0.47□□□□□ -2.33
LRRC39-204ENST00000620882 CMYA5Q8N3K9 4069 aa0.46□□□□□ -2.34
LRRC39-204ENST00000620882 BRCA2P51587 3418 aa0.46□□□□□ -2.34
LRRC39-204ENST00000620882 MT1AP04731 61 aa0.45□□□□□ -2.34
LRRC39-204ENST00000620882 DYNC1H1Q14204 4646 aaKnown RBP0.43□□□□□ -2.34
LRRC39-204ENST00000620882 KRTAP19-6Q3LI70 58 aa0.43□□□□□ -2.34
LRRC39-204ENST00000620882 MUC17Q685J3 4493 aa0.41□□□□□ -2.34
LRRC39-204ENST00000620882 SPRR2AP35326 72 aa0.41□□□□□ -2.34
LRRC39-204ENST00000620882 DNAH5Q8TE73 4624 aa0.4□□□□□ -2.35
LRRC39-204ENST00000620882 HTN1P15515 57 aa0.39□□□□□ -2.35
LRRC39-204ENST00000620882 SPRR2EP22531 72 aa0.38□□□□□ -2.35
LRRC39-204ENST00000620882 SPRR2FQ96RM1 72 aa0.38□□□□□ -2.35
LRRC39-204ENST00000620882 VPS13AQ96RL7 3174 aa0.37□□□□□ -2.35
LRRC39-204ENST00000620882 WDFY3Q8IZQ1 3526 aa0.36□□□□□ -2.35
LRRC39-204ENST00000620882 GOLGB1Q14789 3259 aaKnown RBP0.34□□□□□ -2.35
LRRC39-204ENST00000620882 RHPN1-AS1Q9BWJ2 59 aa0.34□□□□□ -2.35
LRRC39-204ENST00000620882 CENPEQ02224 2701 aa0.31□□□□□ -2.36
LRRC39-204ENST00000620882 CENPFP49454 3210 aa0.29□□□□□ -2.36
LRRC39-204ENST00000620882 H3BUX3 64 aa0.28□□□□□ -2.36
LRRC39-204ENST00000620882 STATHP02808 62 aa0.28□□□□□ -2.36
LRRC39-204ENST00000620882 MT4P47944 62 aa0.27□□□□□ -2.37
LRRC39-204ENST00000620882 A0A096LPF7 62 aa0.26□□□□□ -2.37
LRRC39-204ENST00000620882 DEFB124Q8NES8 71 aa0.25□□□□□ -2.37
LRRC39-204ENST00000620882 DNAH14Q0VDD8 3507 aa0.21□□□□□ -2.38
LRRC39-204ENST00000620882 DEFB133Q30KQ1 61 aa0.2□□□□□ -2.38
LRRC39-204ENST00000620882 DEFB4AO15263 64 aa0.17□□□□□ -2.38
LRRC39-204ENST00000620882 MT1EP04732 61 aa0.16□□□□□ -2.38
LRRC39-204ENST00000620882 MT1HP80294 61 aa0.16□□□□□ -2.38
LRRC39-204ENST00000620882 DEFB108BQ8NET1 73 aa0.15□□□□□ -2.39
LRRC39-204ENST00000620882 MT1LQ93083 61 aa0.14□□□□□ -2.39
LRRC39-204ENST00000620882 CDH23Q9H251 3354 aa0.13□□□□□ -2.39
LRRC39-204ENST00000620882 KRTAP19-7Q3SYF9 63 aa0.12□□□□□ -2.39
LRRC39-204ENST00000620882 LINC01556Q5JQF7 62 aa0.1□□□□□ -2.39
LRRC39-204ENST00000620882 SPRR2GQ9BYE4 73 aa0.1□□□□□ -2.39
LRRC39-204ENST00000620882 MT1GP13640 62 aa0.1□□□□□ -2.39
LRRC39-204ENST00000620882 MT1XP80297 61 aa0.09□□□□□ -2.39
LRRC39-204ENST00000620882 KRTAP19-8Q3LI54 63 aa0.08□□□□□ -2.4
LRRC39-204ENST00000620882 KRTAP6-1Q3LI64 71 aa0.06□□□□□ -2.4
LRRC39-204ENST00000620882 RPS29P62273 56 aaKnown RBP0.05□□□□□ -2.4
LRRC39-204ENST00000620882 KRTAP20-2Q3LI61 65 aa-0.01□□□□□ -2.41
LRRC39-204ENST00000620882 HTN3P15516 51 aa-0.02□□□□□ -2.41
LRRC39-204ENST00000620882 COX14Q96I36 57 aa-0.02□□□□□ -2.41
LRRC39-204ENST00000620882 CD52P31358 61 aa-0.03□□□□□ -2.41
LRRC39-204ENST00000620882 MT2AP02795 61 aa-0.11□□□□□ -2.43
LRRC39-204ENST00000620882 MT1MQ8N339 61 aa-0.11□□□□□ -2.43
LRRC39-204ENST00000620882 MT1BP07438 61 aa-0.16□□□□□ -2.44
LRRC39-204ENST00000620882 Q9Y3F1 56 aa-0.18□□□□□ -2.44
LRRC39-204ENST00000620882 KRTAP19-2Q3LHN2 52 aa-0.21□□□□□ -2.44
LRRC39-204ENST00000620882 MT1HL1P0DM35 61 aa-0.23□□□□□ -2.45
LRRC39-204ENST00000620882 MT1FP04733 61 aa-0.34□□□□□ -2.46
Retrieved 77 of 20,778 RNA–protein pairs in 71.1 ms