RNA–Protein interactions for RNA: ENST00000590484.1

LINC01539-204, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-204ENST00000590484 IQGAP2Q13576 1575 aa0.32□□□□□ -2.36
LINC01539-204ENST00000590484 DNAH2Q9P225 4427 aa0.31□□□□□ -2.36
LINC01539-204ENST00000590484 SPRR2EP22531 72 aa0.31□□□□□ -2.36
LINC01539-204ENST00000590484 SPRR2AP35326 72 aa0.31□□□□□ -2.36
LINC01539-204ENST00000590484 DEFB124Q8NES8 71 aa0.31□□□□□ -2.36
LINC01539-204ENST00000590484 MT4P47944 62 aa0.29□□□□□ -2.36
LINC01539-204ENST00000590484 DUOX1Q9NRD9 1551 aa0.28□□□□□ -2.36
LINC01539-204ENST00000590484 KRTAP6-2Q3LI66 62 aa0.28□□□□□ -2.36
LINC01539-204ENST00000590484 SMIM2Q9BVW6 85 aa0.27□□□□□ -2.37
LINC01539-204ENST00000590484 TOMM5Q8N4H5 51 aa0.26□□□□□ -2.37
LINC01539-204ENST00000590484 FLGP20930 4061 aaPredicted RBP0.24□□□□□ -2.37
LINC01539-204ENST00000590484 DNAH8Q96JB1 4490 aa0.24□□□□□ -2.37
LINC01539-204ENST00000590484 KRTAP20-2Q3LI61 65 aa0.22□□□□□ -2.37
LINC01539-204ENST00000590484 MMP24-AS1A0A0U1RRL7 71 aa0.21□□□□□ -2.38
LINC01539-204ENST00000590484 SPRR2GQ9BYE4 73 aa0.21□□□□□ -2.38
LINC01539-204ENST00000590484 SMR3BP02814 79 aaPredicted RBP0.2□□□□□ -2.38
LINC01539-204ENST00000590484 MT1HL1P0DM35 61 aa0.2□□□□□ -2.38
LINC01539-204ENST00000590484 MT1HP80294 61 aa0.2□□□□□ -2.38
LINC01539-204ENST00000590484 SPRR2FQ96RM1 72 aa0.2□□□□□ -2.38
LINC01539-204ENST00000590484 M0QY20 66 aa0.18□□□□□ -2.38
LINC01539-204ENST00000590484 DEFB110Q30KQ9 67 aa0.17□□□□□ -2.38
LINC01539-204ENST00000590484 KRTAP19-2Q3LHN2 52 aa0.17□□□□□ -2.38
LINC01539-204ENST00000590484 DEFB104AQ8WTQ1 72 aa0.17□□□□□ -2.38
LINC01539-204ENST00000590484 DEFB131AP59861 70 aa0.14□□□□□ -2.39
LINC01539-204ENST00000590484 MT1AP04731 61 aa0.13□□□□□ -2.39
LINC01539-204ENST00000590484 TNP1P09430 55 aa0.12□□□□□ -2.39
LINC01539-204ENST00000590484 A8MTW9 85 aa0.11□□□□□ -2.39
LINC01539-204ENST00000590484 NDUFA1O15239 70 aa0.1□□□□□ -2.39
LINC01539-204ENST00000590484 M0QZ58 72 aa0.08□□□□□ -2.4
LINC01539-204ENST00000590484 GCC2Q8IWJ2 1684 aa0.06□□□□□ -2.4
LINC01539-204ENST00000590484 MT2AP02795 61 aa0.06□□□□□ -2.4
LINC01539-204ENST00000590484 MT1FP04733 61 aa0.06□□□□□ -2.4
LINC01539-204ENST00000590484 KRTAP8-1Q8IUC2 63 aa0.05□□□□□ -2.4
LINC01539-204ENST00000590484 MT1BP07438 61 aa0.04□□□□□ -2.4
LINC01539-204ENST00000590484 STATHP02808 62 aa0.02□□□□□ -2.41
LINC01539-204ENST00000590484 Q9Y3F1 56 aa0□□□□□ -2.41
LINC01539-204ENST00000590484 POLR2KP53803 58 aaKnown RBP-0.04□□□□□ -2.42
LINC01539-204ENST00000590484 DEFB108AA8MXU0 73 aa-0.07□□□□□ -2.42
LINC01539-204ENST00000590484 MT1GP13640 62 aa-0.07□□□□□ -2.42
LINC01539-204ENST00000590484 KRTAP6-1Q3LI64 71 aa-0.07□□□□□ -2.42
LINC01539-204ENST00000590484 CLPSL2Q6UWE3 100 aa-0.07□□□□□ -2.42
LINC01539-204ENST00000590484 MT1MQ8N339 61 aa-0.09□□□□□ -2.42
LINC01539-204ENST00000590484 KRTAP19-8Q3LI54 63 aa-0.11□□□□□ -2.43
LINC01539-204ENST00000590484 KRTAP19-7Q3SYF9 63 aa-0.11□□□□□ -2.43
LINC01539-204ENST00000590484 MT1EP04732 61 aa-0.13□□□□□ -2.43
LINC01539-204ENST00000590484 CD52P31358 61 aa-0.13□□□□□ -2.43
LINC01539-204ENST00000590484 SPART-AS1P0CW21 52 aa-0.14□□□□□ -2.43
LINC01539-204ENST00000590484 KRTAP19-5Q3LI72 72 aa-0.14□□□□□ -2.43
LINC01539-204ENST00000590484 MT1XP80297 61 aa-0.17□□□□□ -2.44
LINC01539-204ENST00000590484 DEFB133Q30KQ1 61 aa-0.17□□□□□ -2.44
LINC01539-204ENST00000590484 DEFB108BQ8NET1 73 aa-0.19□□□□□ -2.44
LINC01539-204ENST00000590484 MT1LQ93083 61 aa-0.2□□□□□ -2.44
LINC01539-204ENST00000590484 RPS29P62273 56 aaKnown RBP-0.22□□□□□ -2.44
LINC01539-204ENST00000590484 DEFB1P60022 68 aa-0.23□□□□□ -2.45
LINC01539-204ENST00000590484 H3BSH0 61 aa-0.27□□□□□ -2.45
LINC01539-204ENST00000590484 RPL39P62891 51 aaKnown RBP-0.3□□□□□ -2.46
LINC01539-204ENST00000590484 COX14Q96I36 57 aa-0.31□□□□□ -2.46
LINC01539-204ENST00000590484 H3BUX3 64 aa-0.32□□□□□ -2.46
LINC01539-204ENST00000590484 DEFB4AO15263 64 aa-0.32□□□□□ -2.46
LINC01539-204ENST00000590484 DEFB136Q30KP8 78 aa-0.32□□□□□ -2.46
LINC01539-204ENST00000590484 TTTY10Q9BZA0 68 aa-0.33□□□□□ -2.46
LINC01539-204ENST00000590484 TOMM7Q9P0U1 55 aa-0.34□□□□□ -2.46
LINC01539-204ENST00000590484 SNRPGP62308 76 aaKnown RBP-0.41□□□□□ -2.48
LINC01539-204ENST00000590484 RPL39LQ96EH5 51 aaKnown RBP-0.41□□□□□ -2.48
LINC01539-204ENST00000590484 LEAP2Q969E1 77 aa-0.42□□□□□ -2.48
LINC01539-204ENST00000590484 A0A096LPF7 62 aa-0.43□□□□□ -2.48
LINC01539-204ENST00000590484 HTN3P15516 51 aa-0.43□□□□□ -2.48
LINC01539-204ENST00000590484 LINC01556Q5JQF7 62 aa-0.43□□□□□ -2.48
LINC01539-204ENST00000590484 A0A096LNI7 61 aa-0.49□□□□□ -2.49
LINC01539-204ENST00000590484 APELAP0DMC3 54 aa-0.53□□□□□ -2.49
LINC01539-204ENST00000590484 LINC01590Q5TEZ4 76 aa-0.55□□□□□ -2.5
LINC01539-204ENST00000590484 RHPN1-AS1Q9BWJ2 59 aa-0.61□□□□□ -2.51
LINC01539-204ENST00000590484 HTN1P15515 57 aa-0.62□□□□□ -2.51
LINC01539-204ENST00000590484 TMEM167AQ8TBQ9 72 aa-0.66□□□□□ -2.52
LINC01539-204ENST00000590484 PRCDQ00LT1 54 aa-0.68□□□□□ -2.52
LINC01539-204ENST00000590484 K7EIM0 57 aa-0.74□□□□□ -2.53
LINC01539-204ENST00000590484 ARHGAP5-AS1Q96IT6 56 aa-0.78□□□□□ -2.53
LINC01539-204ENST00000590484 RPL39P5Q59GN2 51 aa-0.8□□□□□ -2.54
Retrieved 78 of 20,778 RNA–protein pairs in 80.4 ms