RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 MT2AP02795 61 aa1.71□□□□□ -2.14
CDH19-204ENST00000579658 KRTAP10-10P60014 251 aa1.69□□□□□ -2.14
CDH19-204ENST00000579658 H0YAA0 97 aa1.68□□□□□ -2.14
CDH19-204ENST00000579658 MT1FP04733 61 aa1.68□□□□□ -2.14
CDH19-204ENST00000579658 A0A1B0GU33 70 aa1.67□□□□□ -2.14
CDH19-204ENST00000579658 CRIPTQ9P021 101 aa1.67□□□□□ -2.14
CDH19-204ENST00000579658 R4GN34 69 aa1.66□□□□□ -2.14
CDH19-204ENST00000579658 H1FX-AS1Q4G0G2 97 aa1.65□□□□□ -2.14
CDH19-204ENST00000579658 KRTAP2-2Q9BYT5 123 aa1.65□□□□□ -2.14
CDH19-204ENST00000579658 KRTAP2-1Q9BYU5 128 aa1.65□□□□□ -2.14
CDH19-204ENST00000579658 LCE1AQ5T7P2 110 aa1.65□□□□□ -2.15
CDH19-204ENST00000579658 SPINT4Q6UDR6 99 aa1.65□□□□□ -2.15
CDH19-204ENST00000579658 LCE1FQ5T754 118 aa1.61□□□□□ -2.15
CDH19-204ENST00000579658 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
CDH19-204ENST00000579658 MUC12Q9UKN1 5478 aa1.6□□□□□ -2.15
CDH19-204ENST00000579658 KRTAP13-4Q3LI77 160 aa1.58□□□□□ -2.16
CDH19-204ENST00000579658 SPRR2EP22531 72 aa1.57□□□□□ -2.16
CDH19-204ENST00000579658 SPRR2BP35325 72 aa1.57□□□□□ -2.16
CDH19-204ENST00000579658 SPRR2AP35326 72 aa1.57□□□□□ -2.16
CDH19-204ENST00000579658 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
CDH19-204ENST00000579658 S4R3F8 94 aa1.57□□□□□ -2.16
CDH19-204ENST00000579658 KRTAP10-5P60370 271 aa1.55□□□□□ -2.16
CDH19-204ENST00000579658 PRO2289Q9P1D8 64 aa1.55□□□□□ -2.16
CDH19-204ENST00000579658 MDN1Q9NU22 5596 aa1.55□□□□□ -2.16
CDH19-204ENST00000579658 A0A0D9SG42 100 aa1.54□□□□□ -2.16
CDH19-204ENST00000579658 KMT2DO14686 5537 aa1.54□□□□□ -2.16
CDH19-204ENST00000579658 M0QZ58 72 aa1.53□□□□□ -2.16
CDH19-204ENST00000579658 KRTAP12-1P59990 96 aa1.53□□□□□ -2.16
CDH19-204ENST00000579658 KRTAP12-2P59991 146 aa1.53□□□□□ -2.16
CDH19-204ENST00000579658 SPRR2DP22532 72 aa1.53□□□□□ -2.16
CDH19-204ENST00000579658 MT3P25713 68 aa1.52□□□□□ -2.17
CDH19-204ENST00000579658 SPRR2FQ96RM1 72 aa1.52□□□□□ -2.17
CDH19-204ENST00000579658 C10orf95Q9H7T3 257 aa1.51□□□□□ -2.17
CDH19-204ENST00000579658 KRTAP19-8Q3LI54 63 aa1.51□□□□□ -2.17
CDH19-204ENST00000579658 MT1BP07438 61 aa1.49□□□□□ -2.17
CDH19-204ENST00000579658 LCE3CQ5T5A8 94 aa1.48□□□□□ -2.17
CDH19-204ENST00000579658 SPRR2GQ9BYE4 73 aa1.47□□□□□ -2.17
CDH19-204ENST00000579658 KRTAP8-1Q8IUC2 63 aa1.46□□□□□ -2.18
CDH19-204ENST00000579658 KRTAP10-12P60413 245 aa1.43□□□□□ -2.18
CDH19-204ENST00000579658 PP632Q6XCG6 107 aa1.42□□□□□ -2.18
CDH19-204ENST00000579658 PLAC4Q8WY50 150 aa1.42□□□□□ -2.18
CDH19-204ENST00000579658 KRTAP5-10Q6L8G5 202 aa1.41□□□□□ -2.18
CDH19-204ENST00000579658 AHNAK2Q8IVF2 5795 aa1.41□□□□□ -2.18
CDH19-204ENST00000579658 OBSCNQ5VST9 7968 aa1.41□□□□□ -2.18
CDH19-204ENST00000579658 KRTAP5-5Q701N2 237 aaPredicted RBP1.41□□□□□ -2.18
CDH19-204ENST00000579658 SPRR5A0A1B0GTR4 108 aa1.4□□□□□ -2.19
CDH19-204ENST00000579658 MT1XP80297 61 aa1.39□□□□□ -2.19
CDH19-204ENST00000579658 LCE3EQ5T5B0 92 aa1.37□□□□□ -2.19
CDH19-204ENST00000579658 TNP1P09430 55 aa1.35□□□□□ -2.19
CDH19-204ENST00000579658 KRTAP9-6A8MVA2 160 aa1.33□□□□□ -2.2
CDH19-204ENST00000579658 INE1O15225 51 aa1.31□□□□□ -2.2
CDH19-204ENST00000579658 MT4P47944 62 aa1.3□□□□□ -2.2
CDH19-204ENST00000579658 DSTQ03001 7570 aaKnown RBP1.28□□□□□ -2.2
CDH19-204ENST00000579658 KRTAP19-3Q7Z4W3 81 aa1.27□□□□□ -2.21
CDH19-204ENST00000579658 LCE3AQ5TA76 89 aa1.26□□□□□ -2.21
CDH19-204ENST00000579658 KRTAP19-7Q3SYF9 63 aa1.25□□□□□ -2.21
CDH19-204ENST00000579658 MT1GP13640 62 aa1.24□□□□□ -2.21
CDH19-204ENST00000579658 KRTAP19-5Q3LI72 72 aa1.23□□□□□ -2.21
CDH19-204ENST00000579658 MUC5ACP98088 5654 aa1.23□□□□□ -2.21
CDH19-204ENST00000579658 MT1EP04732 61 aa1.22□□□□□ -2.21
CDH19-204ENST00000579658 LCE3DQ9BYE3 92 aa1.22□□□□□ -2.21
CDH19-204ENST00000579658 KRTAP12-3P60328 96 aa1.21□□□□□ -2.22
CDH19-204ENST00000579658 KRTAP20-2Q3LI61 65 aa1.21□□□□□ -2.22
CDH19-204ENST00000579658 MT1LQ93083 61 aa1.18□□□□□ -2.22
CDH19-204ENST00000579658 MT1MQ8N339 61 aa1.18□□□□□ -2.22
CDH19-204ENST00000579658 KRTAP12-4P60329 112 aa1.17□□□□□ -2.22
CDH19-204ENST00000579658 LCE1CQ5T751 118 aa1.11□□□□□ -2.23
CDH19-204ENST00000579658 LCE1BQ5T7P3 118 aa1.11□□□□□ -2.23
CDH19-204ENST00000579658 MUC19Q7Z5P9 8384 aa1.08□□□□□ -2.24
CDH19-204ENST00000579658 SYNE1Q8NF91 8797 aaKnown RBP1.04□□□□□ -2.24
CDH19-204ENST00000579658 KRTAP6-1Q3LI64 71 aa1.02□□□□□ -2.25
CDH19-204ENST00000579658 MT1AP04731 61 aa1□□□□□ -2.25
CDH19-204ENST00000579658 KRTAP6-2Q3LI66 62 aa0.95□□□□□ -2.26
CDH19-204ENST00000579658 PRM1P04553 51 aa0.84□□□□□ -2.27
CDH19-204ENST00000579658 PHGR1C9JFL3 82 aa0.83□□□□□ -2.28
CDH19-204ENST00000579658 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
CDH19-204ENST00000579658 KRTAP21-2Q3LI59 83 aa0.78□□□□□ -2.28
CDH19-204ENST00000579658 MUC16Q8WXI7 14507 aa0.48□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 62.5 ms