RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 SPINK1P00995 79 aa0.69□□□□□ -2.3
USP8-216ENST00000561206 HTN3P15516 51 aa0.69□□□□□ -2.3
USP8-216ENST00000561206 SPRR1BP22528 89 aa0.69□□□□□ -2.3
USP8-216ENST00000561206 PRLHP81277 87 aa0.69□□□□□ -2.3
USP8-216ENST00000561206 H1FX-AS1Q4G0G2 97 aa0.69□□□□□ -2.3
USP8-216ENST00000561206 Q96NJ1 140 aa0.69□□□□□ -2.3
USP8-216ENST00000561206 CRIPTQ9P021 101 aa0.69□□□□□ -2.3
USP8-216ENST00000561206 A0A096LNI7 61 aa0.68□□□□□ -2.3
USP8-216ENST00000561206 NBDYA0A0U1RRE5 68 aa0.68□□□□□ -2.3
USP8-216ENST00000561206 H0YAA0 97 aa0.68□□□□□ -2.3
USP8-216ENST00000561206 K7EIL1 84 aa0.68□□□□□ -2.3
USP8-216ENST00000561206 SPART-AS1P0CW21 52 aa0.68□□□□□ -2.3
USP8-216ENST00000561206 Q6ZRN7 208 aaPredicted RBP0.68□□□□□ -2.3
USP8-216ENST00000561206 DNAH6Q9C0G6 4158 aa0.68□□□□□ -2.3
USP8-216ENST00000561206 DEFB4AO15263 64 aa0.67□□□□□ -2.3
USP8-216ENST00000561206 RPL37P61927 97 aaKnown RBP0.67□□□□□ -2.3
USP8-216ENST00000561206 DEFB135Q30KP9 77 aa0.67□□□□□ -2.3
USP8-216ENST00000561206 LINC01556Q5JQF7 62 aa0.67□□□□□ -2.3
USP8-216ENST00000561206 SPINK6Q6UWN8 80 aa0.67□□□□□ -2.3
USP8-216ENST00000561206 DNAH2Q9P225 4427 aa0.67□□□□□ -2.3
USP8-216ENST00000561206 H3BNG1 76 aa0.66□□□□□ -2.3
USP8-216ENST00000561206 COX6B2Q6YFQ2 88 aa0.66□□□□□ -2.3
USP8-216ENST00000561206 LPAP08519 4548 aa0.66□□□□□ -2.3
USP8-216ENST00000561206 DNAH3Q8TD57 4116 aa0.66□□□□□ -2.3
USP8-216ENST00000561206 KRTAP10-4P60372 401 aaPredicted RBP0.65□□□□□ -2.31
USP8-216ENST00000561206 C10orf95Q9H7T3 257 aa0.65□□□□□ -2.31
USP8-216ENST00000561206 APLNQ9ULZ1 77 aa0.65□□□□□ -2.31
USP8-216ENST00000561206 VPS13BQ7Z7G8 4022 aa0.65□□□□□ -2.31
USP8-216ENST00000561206 A0A0D9SG42 100 aa0.64□□□□□ -2.31
USP8-216ENST00000561206 PLAC4Q8WY50 150 aa0.64□□□□□ -2.31
USP8-216ENST00000561206 HRNRQ86YZ3 2850 aaPredicted RBP0.63□□□□□ -2.31
USP8-216ENST00000561206 UBE2DNLQ8IWF7 75 aa0.63□□□□□ -2.31
USP8-216ENST00000561206 S4R3F8 94 aa0.63□□□□□ -2.31
USP8-216ENST00000561206 DNAH17Q9UFH2 4485 aa0.63□□□□□ -2.31
USP8-216ENST00000561206 INE1O15225 51 aa0.62□□□□□ -2.31
USP8-216ENST00000561206 KRTAP19-6Q3LI70 58 aa0.62□□□□□ -2.31
USP8-216ENST00000561206 TNXBP22105 4242 aa0.61□□□□□ -2.31
USP8-216ENST00000561206 MUC17Q685J3 4493 aa0.61□□□□□ -2.31
USP8-216ENST00000561206 M0QZ58 72 aa0.59□□□□□ -2.31
USP8-216ENST00000561206 DNAH8Q96JB1 4490 aa0.58□□□□□ -2.32
USP8-216ENST00000561206 C9orf92A6NGG3 77 aa0.57□□□□□ -2.32
USP8-216ENST00000561206 RPS29P62273 56 aaKnown RBP0.57□□□□□ -2.32
USP8-216ENST00000561206 SPRR2EP22531 72 aa0.56□□□□□ -2.32
USP8-216ENST00000561206 SPRR2BP35325 72 aa0.56□□□□□ -2.32
USP8-216ENST00000561206 SPRR2AP35326 72 aa0.56□□□□□ -2.32
USP8-216ENST00000561206 SPRR2DP22532 72 aa0.55□□□□□ -2.32
USP8-216ENST00000561206 MT4P47944 62 aa0.55□□□□□ -2.32
USP8-216ENST00000561206 Q5VSD8 79 aa0.55□□□□□ -2.32
USP8-216ENST00000561206 SMR3BP02814 79 aaPredicted RBP0.54□□□□□ -2.32
USP8-216ENST00000561206 TNP1P09430 55 aa0.54□□□□□ -2.32
USP8-216ENST00000561206 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
USP8-216ENST00000561206 FLGP20930 4061 aaPredicted RBP0.49□□□□□ -2.33
USP8-216ENST00000561206 SYNE1Q8NF91 8797 aaKnown RBP0.47□□□□□ -2.33
USP8-216ENST00000561206 M0R2T5 61 aa0.45□□□□□ -2.34
USP8-216ENST00000561206 KRTAP8-1Q8IUC2 63 aa0.45□□□□□ -2.34
USP8-216ENST00000561206 MT1HL1P0DM35 61 aa0.44□□□□□ -2.34
USP8-216ENST00000561206 SPRR2FQ96RM1 72 aa0.44□□□□□ -2.34
USP8-216ENST00000561206 MT1HP80294 61 aa0.43□□□□□ -2.34
USP8-216ENST00000561206 SPRR2GQ9BYE4 73 aa0.41□□□□□ -2.34
USP8-216ENST00000561206 KRTAP19-5Q3LI72 72 aa0.39□□□□□ -2.35
USP8-216ENST00000561206 KRTAP19-2Q3LHN2 52 aa0.38□□□□□ -2.35
USP8-216ENST00000561206 KRTAP19-8Q3LI54 63 aa0.38□□□□□ -2.35
USP8-216ENST00000561206 KRTAP21-1Q3LI58 79 aa0.38□□□□□ -2.35
USP8-216ENST00000561206 PRM1P04553 51 aa0.37□□□□□ -2.35
USP8-216ENST00000561206 MT1XP80297 61 aa0.37□□□□□ -2.35
USP8-216ENST00000561206 MT1BP07438 61 aa0.36□□□□□ -2.35
USP8-216ENST00000561206 KRTAP20-2Q3LI61 65 aa0.36□□□□□ -2.35
USP8-216ENST00000561206 MT2AP02795 61 aa0.35□□□□□ -2.35
USP8-216ENST00000561206 MT1EP04732 61 aa0.35□□□□□ -2.35
USP8-216ENST00000561206 MT1FP04733 61 aa0.35□□□□□ -2.35
USP8-216ENST00000561206 MT1LQ93083 61 aa0.35□□□□□ -2.35
USP8-216ENST00000561206 MT1AP04731 61 aa0.34□□□□□ -2.36
USP8-216ENST00000561206 MT1GP13640 62 aa0.33□□□□□ -2.36
USP8-216ENST00000561206 KRTAP6-2Q3LI66 62 aa0.33□□□□□ -2.36
USP8-216ENST00000561206 KRTAP19-7Q3SYF9 63 aa0.33□□□□□ -2.36
USP8-216ENST00000561206 KRTAP19-3Q7Z4W3 81 aa0.32□□□□□ -2.36
USP8-216ENST00000561206 MT1MQ8N339 61 aa0.31□□□□□ -2.36
USP8-216ENST00000561206 KRTAP6-1Q3LI64 71 aa0.28□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 270.5 ms