RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 TMEM167BQ9NRX6 74 aa0.13□□□□□ -2.39
HMG20A-211ENST00000560867 KRTAP19-2Q3LHN2 52 aa0.12□□□□□ -2.39
HMG20A-211ENST00000560867 PLNP26678 52 aa0.11□□□□□ -2.39
HMG20A-211ENST00000560867 KRTAP8-1Q8IUC2 63 aa0.11□□□□□ -2.39
HMG20A-211ENST00000560867 H3BUA1 57 aa0.1□□□□□ -2.39
HMG20A-211ENST00000560867 CMC2Q9NRP2 79 aa0.1□□□□□ -2.39
HMG20A-211ENST00000560867 SNRPGP15A8MWD9 76 aa0.09□□□□□ -2.4
HMG20A-211ENST00000560867 STATHP02808 62 aa0.09□□□□□ -2.4
HMG20A-211ENST00000560867 MT1FP04733 61 aa0.09□□□□□ -2.4
HMG20A-211ENST00000560867 KRTAP6-2Q3LI66 62 aa0.09□□□□□ -2.4
HMG20A-211ENST00000560867 H3BNG1 76 aa0.08□□□□□ -2.4
HMG20A-211ENST00000560867 MT2AP02795 61 aa0.08□□□□□ -2.4
HMG20A-211ENST00000560867 TFF3Q07654 80 aa0.08□□□□□ -2.4
HMG20A-211ENST00000560867 TIMM8BQ9Y5J9 83 aaPredicted RBP0.08□□□□□ -2.4
HMG20A-211ENST00000560867 IGLV5-48A0A075B6I7 105 aa0.07□□□□□ -2.4
HMG20A-211ENST00000560867 C9orf92A6NGG3 77 aa0.07□□□□□ -2.4
HMG20A-211ENST00000560867 SPRR2GQ9BYE4 73 aa0.07□□□□□ -2.4
HMG20A-211ENST00000560867 SMIM27A0A1W2PRY6 76 aa0.05□□□□□ -2.4
HMG20A-211ENST00000560867 KAAG1Q9UBP8 84 aa0.05□□□□□ -2.4
HMG20A-211ENST00000560867 LINC01546A6NGU7 62 aa0.04□□□□□ -2.4
HMG20A-211ENST00000560867 ABRACLQ9P1F3 81 aa0.04□□□□□ -2.4
HMG20A-211ENST00000560867 WFDC10BQ8IUB3 73 aa0.02□□□□□ -2.41
HMG20A-211ENST00000560867 NOP10Q9NPE3 64 aaKnown RBP0.02□□□□□ -2.41
HMG20A-211ENST00000560867 MT1AP04731 61 aa0.01□□□□□ -2.41
HMG20A-211ENST00000560867 MT1BP07438 61 aa0.01□□□□□ -2.41
HMG20A-211ENST00000560867 MMP24-AS1A0A0U1RRL7 71 aa-0.01□□□□□ -2.41
HMG20A-211ENST00000560867 SMIM2Q9BVW6 85 aa-0.01□□□□□ -2.41
HMG20A-211ENST00000560867 DEFB110Q30KQ9 67 aa-0.03□□□□□ -2.41
HMG20A-211ENST00000560867 M0QY20 66 aa-0.04□□□□□ -2.42
HMG20A-211ENST00000560867 KRTAP6-1Q3LI64 71 aa-0.05□□□□□ -2.42
HMG20A-211ENST00000560867 A8MTW9 85 aa-0.06□□□□□ -2.42
HMG20A-211ENST00000560867 DEFB108AA8MXU0 73 aa-0.06□□□□□ -2.42
HMG20A-211ENST00000560867 TNP1P09430 55 aa-0.06□□□□□ -2.42
HMG20A-211ENST00000560867 TOMM5Q8N4H5 51 aa-0.06□□□□□ -2.42
HMG20A-211ENST00000560867 M0QZ58 72 aa-0.07□□□□□ -2.42
HMG20A-211ENST00000560867 DEFB131AP59861 70 aa-0.07□□□□□ -2.42
HMG20A-211ENST00000560867 Q9Y3F1 56 aa-0.07□□□□□ -2.42
HMG20A-211ENST00000560867 CD52P31358 61 aa-0.08□□□□□ -2.42
HMG20A-211ENST00000560867 NDUFA1O15239 70 aa-0.09□□□□□ -2.42
HMG20A-211ENST00000560867 MT1MQ8N339 61 aa-0.09□□□□□ -2.42
HMG20A-211ENST00000560867 MT1GP13640 62 aa-0.1□□□□□ -2.43
HMG20A-211ENST00000560867 DEFB133Q30KQ1 61 aa-0.1□□□□□ -2.43
HMG20A-211ENST00000560867 KRTAP19-5Q3LI72 72 aa-0.11□□□□□ -2.43
HMG20A-211ENST00000560867 KRTAP19-7Q3SYF9 63 aa-0.11□□□□□ -2.43
HMG20A-211ENST00000560867 KRTAP19-8Q3LI54 63 aa-0.12□□□□□ -2.43
HMG20A-211ENST00000560867 MT1EP04732 61 aa-0.13□□□□□ -2.43
HMG20A-211ENST00000560867 H3BSH0 61 aa-0.14□□□□□ -2.43
HMG20A-211ENST00000560867 POLR2KP53803 58 aaKnown RBP-0.15□□□□□ -2.43
HMG20A-211ENST00000560867 CLPSL2Q6UWE3 100 aa-0.15□□□□□ -2.43
HMG20A-211ENST00000560867 MT1XP80297 61 aa-0.18□□□□□ -2.44
HMG20A-211ENST00000560867 DEFB108BQ8NET1 73 aa-0.18□□□□□ -2.44
HMG20A-211ENST00000560867 SPART-AS1P0CW21 52 aa-0.2□□□□□ -2.44
HMG20A-211ENST00000560867 RPS29P62273 56 aaKnown RBP-0.2□□□□□ -2.44
HMG20A-211ENST00000560867 TTTY10Q9BZA0 68 aa-0.2□□□□□ -2.44
HMG20A-211ENST00000560867 DEFB4AO15263 64 aa-0.21□□□□□ -2.44
HMG20A-211ENST00000560867 DEFB1P60022 68 aa-0.21□□□□□ -2.44
HMG20A-211ENST00000560867 MT1LQ93083 61 aa-0.21□□□□□ -2.44
HMG20A-211ENST00000560867 DEFB136Q30KP8 78 aa-0.22□□□□□ -2.44
HMG20A-211ENST00000560867 H3BUX3 64 aa-0.26□□□□□ -2.45
HMG20A-211ENST00000560867 RPL39P62891 51 aaKnown RBP-0.28□□□□□ -2.45
HMG20A-211ENST00000560867 HTN3P15516 51 aa-0.29□□□□□ -2.46
HMG20A-211ENST00000560867 LEAP2Q969E1 77 aa-0.33□□□□□ -2.46
HMG20A-211ENST00000560867 TOMM7Q9P0U1 55 aa-0.33□□□□□ -2.46
HMG20A-211ENST00000560867 RPL39LQ96EH5 51 aaKnown RBP-0.34□□□□□ -2.46
HMG20A-211ENST00000560867 COX14Q96I36 57 aa-0.34□□□□□ -2.46
HMG20A-211ENST00000560867 SNRPGP62308 76 aaKnown RBP-0.36□□□□□ -2.47
HMG20A-211ENST00000560867 LINC01556Q5JQF7 62 aa-0.37□□□□□ -2.47
HMG20A-211ENST00000560867 APELAP0DMC3 54 aa-0.4□□□□□ -2.47
HMG20A-211ENST00000560867 LINC01590Q5TEZ4 76 aa-0.41□□□□□ -2.48
HMG20A-211ENST00000560867 A0A096LPF7 62 aa-0.42□□□□□ -2.48
HMG20A-211ENST00000560867 A0A096LNI7 61 aa-0.45□□□□□ -2.48
HMG20A-211ENST00000560867 HTN1P15515 57 aa-0.5□□□□□ -2.49
HMG20A-211ENST00000560867 RHPN1-AS1Q9BWJ2 59 aa-0.52□□□□□ -2.49
HMG20A-211ENST00000560867 ARHGAP5-AS1Q96IT6 56 aa-0.55□□□□□ -2.5
HMG20A-211ENST00000560867 K7EIM0 57 aa-0.61□□□□□ -2.51
HMG20A-211ENST00000560867 PRCDQ00LT1 54 aa-0.62□□□□□ -2.51
HMG20A-211ENST00000560867 TMEM167AQ8TBQ9 72 aa-0.63□□□□□ -2.51
HMG20A-211ENST00000560867 RPL39P5Q59GN2 51 aa-0.76□□□□□ -2.53
Retrieved 78 of 20,778 RNA–protein pairs in 52 ms