RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 RPS29P62273 56 aaKnown RBP0.26□□□□□ -2.37
SPG11-218ENST00000559754 WT1-ASQ06250 92 aa0.26□□□□□ -2.37
SPG11-218ENST00000559754 FLGP20930 4061 aaPredicted RBP0.25□□□□□ -2.37
SPG11-218ENST00000559754 S4R3F8 94 aa0.25□□□□□ -2.37
SPG11-218ENST00000559754 SMR3BP02814 79 aaPredicted RBP0.24□□□□□ -2.37
SPG11-218ENST00000559754 LINC01556Q5JQF7 62 aa0.24□□□□□ -2.37
SPG11-218ENST00000559754 DEFB106AQ8N104 65 aa0.24□□□□□ -2.37
SPG11-218ENST00000559754 H3BSH0 61 aa0.23□□□□□ -2.37
SPG11-218ENST00000559754 MT1HP80294 61 aa0.23□□□□□ -2.37
SPG11-218ENST00000559754 DEFB110Q30KQ9 67 aa0.23□□□□□ -2.37
SPG11-218ENST00000559754 TMEM167BQ9NRX6 74 aa0.23□□□□□ -2.37
SPG11-218ENST00000559754 TIMM8BQ9Y5J9 83 aaPredicted RBP0.23□□□□□ -2.37
SPG11-218ENST00000559754 H0YGX0 51 aa0.21□□□□□ -2.38
SPG11-218ENST00000559754 MT1FP04733 61 aa0.21□□□□□ -2.38
SPG11-218ENST00000559754 SPRR2EP22531 72 aa0.21□□□□□ -2.38
SPG11-218ENST00000559754 SPRR2AP35326 72 aa0.21□□□□□ -2.38
SPG11-218ENST00000559754 A8MTW9 85 aa0.2□□□□□ -2.38
SPG11-218ENST00000559754 MT1BP07438 61 aa0.2□□□□□ -2.38
SPG11-218ENST00000559754 DEFB136Q30KP8 78 aa0.2□□□□□ -2.38
SPG11-218ENST00000559754 KRTAP19-2Q3LHN2 52 aa0.2□□□□□ -2.38
SPG11-218ENST00000559754 TMEM167AQ8TBQ9 72 aa0.2□□□□□ -2.38
SPG11-218ENST00000559754 LEAP2Q969E1 77 aa0.2□□□□□ -2.38
SPG11-218ENST00000559754 SPRR2FQ96RM1 72 aa0.2□□□□□ -2.38
SPG11-218ENST00000559754 A0A096LPF7 62 aa0.19□□□□□ -2.38
SPG11-218ENST00000559754 PRCDQ00LT1 54 aa0.19□□□□□ -2.38
SPG11-218ENST00000559754 KRTAP8-1Q8IUC2 63 aa0.19□□□□□ -2.38
SPG11-218ENST00000559754 RHPN1-AS1Q9BWJ2 59 aa0.19□□□□□ -2.38
SPG11-218ENST00000559754 ABRACLQ9P1F3 81 aa0.19□□□□□ -2.38
SPG11-218ENST00000559754 C9orf92A6NGG3 77 aa0.18□□□□□ -2.38
SPG11-218ENST00000559754 MT1GP13640 62 aa0.18□□□□□ -2.38
SPG11-218ENST00000559754 PLNP26678 52 aa0.18□□□□□ -2.38
SPG11-218ENST00000559754 DEFB131AP59861 70 aa0.18□□□□□ -2.38
SPG11-218ENST00000559754 SNRPGP62308 76 aaKnown RBP0.18□□□□□ -2.38
SPG11-218ENST00000559754 LINC00308Q8TCZ7 52 aa0.18□□□□□ -2.38
SPG11-218ENST00000559754 SPRR2GQ9BYE4 73 aa0.18□□□□□ -2.38
SPG11-218ENST00000559754 SNRPGP15A8MWD9 76 aa0.17□□□□□ -2.38
SPG11-218ENST00000559754 K7EIM0 57 aa0.17□□□□□ -2.38
SPG11-218ENST00000559754 DEFB4AO15263 64 aa0.17□□□□□ -2.38
SPG11-218ENST00000559754 MT2AP02795 61 aa0.17□□□□□ -2.38
SPG11-218ENST00000559754 HTN3P15516 51 aa0.17□□□□□ -2.38
SPG11-218ENST00000559754 KRTAP19-8Q3LI54 63 aa0.17□□□□□ -2.38
SPG11-218ENST00000559754 TTTY10Q9BZA0 68 aa0.17□□□□□ -2.38
SPG11-218ENST00000559754 NOP10Q9NPE3 64 aaKnown RBP0.17□□□□□ -2.38
SPG11-218ENST00000559754 KRTAP20-2Q3LI61 65 aa0.16□□□□□ -2.38
SPG11-218ENST00000559754 LINC01590Q5TEZ4 76 aa0.16□□□□□ -2.38
SPG11-218ENST00000559754 WFDC10BQ8IUB3 73 aa0.16□□□□□ -2.38
SPG11-218ENST00000559754 MT1MQ8N339 61 aa0.16□□□□□ -2.38
SPG11-218ENST00000559754 CMC2Q9NRP2 79 aa0.16□□□□□ -2.38
SPG11-218ENST00000559754 NDUFA1O15239 70 aa0.15□□□□□ -2.39
SPG11-218ENST00000559754 MT4P47944 62 aa0.15□□□□□ -2.39
SPG11-218ENST00000559754 ARHGAP5-AS1Q96IT6 56 aa0.15□□□□□ -2.39
SPG11-218ENST00000559754 A0A096LNI7 61 aa0.14□□□□□ -2.39
SPG11-218ENST00000559754 HTN1P15515 57 aa0.14□□□□□ -2.39
SPG11-218ENST00000559754 MT1EP04732 61 aa0.13□□□□□ -2.39
SPG11-218ENST00000559754 RPL39P5Q59GN2 51 aa0.12□□□□□ -2.39
SPG11-218ENST00000559754 MT1LQ93083 61 aa0.12□□□□□ -2.39
SPG11-218ENST00000559754 IGLV5-48A0A075B6I7 105 aa0.11□□□□□ -2.39
SPG11-218ENST00000559754 LINC01546A6NGU7 62 aa0.11□□□□□ -2.39
SPG11-218ENST00000559754 M0QZ58 72 aa0.11□□□□□ -2.39
SPG11-218ENST00000559754 APELAP0DMC3 54 aa0.11□□□□□ -2.39
SPG11-218ENST00000559754 MT1XP80297 61 aa0.11□□□□□ -2.39
SPG11-218ENST00000559754 CLPSL2Q6UWE3 100 aa0.11□□□□□ -2.39
SPG11-218ENST00000559754 M0QY20 66 aa0.1□□□□□ -2.39
SPG11-218ENST00000559754 KRTAP6-2Q3LI66 62 aa0.1□□□□□ -2.39
SPG11-218ENST00000559754 KRTAP19-7Q3SYF9 63 aa0.1□□□□□ -2.39
SPG11-218ENST00000559754 MT1AP04731 61 aa0.09□□□□□ -2.4
SPG11-218ENST00000559754 SMIM2Q9BVW6 85 aa0.09□□□□□ -2.4
SPG11-218ENST00000559754 MMP24-AS1A0A0U1RRL7 71 aa0.08□□□□□ -2.4
SPG11-218ENST00000559754 TNP1P09430 55 aa0.08□□□□□ -2.4
SPG11-218ENST00000559754 POLR2KP53803 58 aaKnown RBP0.08□□□□□ -2.4
SPG11-218ENST00000559754 DEFB1P60022 68 aa0.08□□□□□ -2.4
SPG11-218ENST00000559754 SMIM27A0A1W2PRY6 76 aa0.07□□□□□ -2.4
SPG11-218ENST00000559754 TOMM7Q9P0U1 55 aa0.06□□□□□ -2.4
SPG11-218ENST00000559754 KRTAP6-1Q3LI64 71 aa0.05□□□□□ -2.4
SPG11-218ENST00000559754 KRTAP19-5Q3LI72 72 aa0.05□□□□□ -2.4
SPG11-218ENST00000559754 TOMM5Q8N4H5 51 aa0.02□□□□□ -2.41
SPG11-218ENST00000559754 RPL39LQ96EH5 51 aaKnown RBP0.02□□□□□ -2.41
SPG11-218ENST00000559754 RPL39P62891 51 aaKnown RBP0.01□□□□□ -2.41
Retrieved 78 of 20,778 RNA–protein pairs in 166.6 ms