RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 DEFB114Q30KQ6 69 aa-0.12□□□□□ -2.43
VPS13C-207ENST00000558919 MT1XP80297 61 aa-0.13□□□□□ -2.43
VPS13C-207ENST00000558919 DEFB106AQ8N104 65 aa-0.13□□□□□ -2.43
VPS13C-207ENST00000558919 MT1LQ93083 61 aa-0.13□□□□□ -2.43
VPS13C-207ENST00000558919 Q9Y3F1 56 aa-0.13□□□□□ -2.43
VPS13C-207ENST00000558919 DEFB4AO15263 64 aa-0.14□□□□□ -2.43
VPS13C-207ENST00000558919 DEFB133Q30KQ1 61 aa-0.14□□□□□ -2.43
VPS13C-207ENST00000558919 MINOS1Q5TGZ0 78 aa-0.14□□□□□ -2.43
VPS13C-207ENST00000558919 CD52P31358 61 aa-0.15□□□□□ -2.43
VPS13C-207ENST00000558919 DEFB108BQ8NET1 73 aa-0.15□□□□□ -2.43
VPS13C-207ENST00000558919 S4R3F8 94 aa-0.15□□□□□ -2.43
VPS13C-207ENST00000558919 LINC01549A6NIU2 74 aa-0.16□□□□□ -2.44
VPS13C-207ENST00000558919 WT1-ASQ06250 92 aa-0.16□□□□□ -2.44
VPS13C-207ENST00000558919 KRTAP19-5Q3LI72 72 aa-0.16□□□□□ -2.44
VPS13C-207ENST00000558919 H3BUX3 64 aa-0.17□□□□□ -2.44
VPS13C-207ENST00000558919 HTN3P15516 51 aa-0.17□□□□□ -2.44
VPS13C-207ENST00000558919 DEFB1P60022 68 aa-0.17□□□□□ -2.44
VPS13C-207ENST00000558919 DEFB136Q30KP8 78 aa-0.17□□□□□ -2.44
VPS13C-207ENST00000558919 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.17□□□□□ -2.44
VPS13C-207ENST00000558919 FCER1GP30273 86 aa-0.18□□□□□ -2.44
VPS13C-207ENST00000558919 RPS27P42677 84 aaKnown RBP-0.18□□□□□ -2.44
VPS13C-207ENST00000558919 NCBP2-AS2Q69YL0 99 aa-0.18□□□□□ -2.44
VPS13C-207ENST00000558919 RPS27LQ71UM5 84 aaKnown RBP-0.18□□□□□ -2.44
VPS13C-207ENST00000558919 COX14Q96I36 57 aa-0.18□□□□□ -2.44
VPS13C-207ENST00000558919 C6orf48Q9UBA6 75 aa-0.18□□□□□ -2.44
VPS13C-207ENST00000558919 K7EMI3 77 aa-0.19□□□□□ -2.44
VPS13C-207ENST00000558919 SPART-AS1P0CW21 52 aa-0.19□□□□□ -2.44
VPS13C-207ENST00000558919 LINC01556Q5JQF7 62 aa-0.19□□□□□ -2.44
VPS13C-207ENST00000558919 A0A087WWC5 75 aa-0.2□□□□□ -2.44
VPS13C-207ENST00000558919 H3BUA1 57 aa-0.2□□□□□ -2.44
VPS13C-207ENST00000558919 LEAP2Q969E1 77 aa-0.21□□□□□ -2.44
VPS13C-207ENST00000558919 SFTA3P0C7M3 94 aa-0.22□□□□□ -2.44
VPS13C-207ENST00000558919 APELAP0DMC3 54 aa-0.22□□□□□ -2.44
VPS13C-207ENST00000558919 SERF2P84101 59 aa-0.22□□□□□ -2.44
VPS13C-207ENST00000558919 DEFB110Q30KQ9 67 aa-0.22□□□□□ -2.44
VPS13C-207ENST00000558919 WFDC10BQ8IUB3 73 aa-0.22□□□□□ -2.44
VPS13C-207ENST00000558919 IGLV5-48A0A075B6I7 105 aa-0.23□□□□□ -2.45
VPS13C-207ENST00000558919 LINC01546A6NGU7 62 aa-0.23□□□□□ -2.45
VPS13C-207ENST00000558919 M0R1W7 72 aa-0.23□□□□□ -2.45
VPS13C-207ENST00000558919 HTN1P15515 57 aa-0.23□□□□□ -2.45
VPS13C-207ENST00000558919 NMES1Q9C002 83 aa-0.23□□□□□ -2.45
VPS13C-207ENST00000558919 NOP10Q9NPE3 64 aaKnown RBP-0.23□□□□□ -2.45
VPS13C-207ENST00000558919 A0A096LNI7 61 aa-0.24□□□□□ -2.45
VPS13C-207ENST00000558919 A0A096LPF7 62 aa-0.24□□□□□ -2.45
VPS13C-207ENST00000558919 CLPSL2Q6UWE3 100 aa-0.24□□□□□ -2.45
VPS13C-207ENST00000558919 S100ZQ8WXG8 99 aa-0.24□□□□□ -2.45
VPS13C-207ENST00000558919 MMP24-AS1A0A0U1RRL7 71 aa-0.25□□□□□ -2.45
VPS13C-207ENST00000558919 A8MTW9 85 aa-0.25□□□□□ -2.45
VPS13C-207ENST00000558919 SMIM31A0A1B0GVY4 71 aa-0.26□□□□□ -2.45
VPS13C-207ENST00000558919 M0QZ58 72 aa-0.26□□□□□ -2.45
VPS13C-207ENST00000558919 TMEM167BQ9NRX6 74 aa-0.26□□□□□ -2.45
VPS13C-207ENST00000558919 DEFB131AP59861 70 aa-0.27□□□□□ -2.45
VPS13C-207ENST00000558919 RHPN1-AS1Q9BWJ2 59 aa-0.27□□□□□ -2.45
VPS13C-207ENST00000558919 ABRACLQ9P1F3 81 aa-0.27□□□□□ -2.45
VPS13C-207ENST00000558919 TNP1P09430 55 aa-0.28□□□□□ -2.45
VPS13C-207ENST00000558919 IGIPA6NJ69 53 aa-0.29□□□□□ -2.46
VPS13C-207ENST00000558919 LINC00308Q8TCZ7 52 aa-0.29□□□□□ -2.46
VPS13C-207ENST00000558919 KAAG1Q9UBP8 84 aa-0.29□□□□□ -2.46
VPS13C-207ENST00000558919 H0YGX0 51 aa-0.31□□□□□ -2.46
VPS13C-207ENST00000558919 PRCDQ00LT1 54 aa-0.31□□□□□ -2.46
VPS13C-207ENST00000558919 TMEM167AQ8TBQ9 72 aa-0.31□□□□□ -2.46
VPS13C-207ENST00000558919 SMIM27A0A1W2PRY6 76 aa-0.32□□□□□ -2.46
VPS13C-207ENST00000558919 M0QY20 66 aa-0.32□□□□□ -2.46
VPS13C-207ENST00000558919 NDUFA1O15239 70 aa-0.34□□□□□ -2.46
VPS13C-207ENST00000558919 LINC01590Q5TEZ4 76 aa-0.35□□□□□ -2.47
VPS13C-207ENST00000558919 SMIM2Q9BVW6 85 aa-0.37□□□□□ -2.47
VPS13C-207ENST00000558919 PLNP26678 52 aa-0.38□□□□□ -2.47
VPS13C-207ENST00000558919 POLR2KP53803 58 aaKnown RBP-0.38□□□□□ -2.47
VPS13C-207ENST00000558919 K7EIM0 57 aa-0.39□□□□□ -2.47
VPS13C-207ENST00000558919 RPL39P5Q59GN2 51 aa-0.4□□□□□ -2.47
VPS13C-207ENST00000558919 TOMM7Q9P0U1 55 aa-0.4□□□□□ -2.47
VPS13C-207ENST00000558919 ARHGAP5-AS1Q96IT6 56 aa-0.42□□□□□ -2.48
VPS13C-207ENST00000558919 CMC2Q9NRP2 79 aa-0.42□□□□□ -2.48
VPS13C-207ENST00000558919 SNRPGP15A8MWD9 76 aa-0.44□□□□□ -2.48
VPS13C-207ENST00000558919 SNRPGP62308 76 aaKnown RBP-0.44□□□□□ -2.48
VPS13C-207ENST00000558919 RPL39LQ96EH5 51 aaKnown RBP-0.49□□□□□ -2.49
VPS13C-207ENST00000558919 RPL39P62891 51 aaKnown RBP-0.5□□□□□ -2.49
VPS13C-207ENST00000558919 TOMM5Q8N4H5 51 aa-0.64□□□□□ -2.51
Retrieved 78 of 20,778 RNA–protein pairs in 60.4 ms