RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 SPINK1P00995 79 aa0.74□□□□□ -2.29
LRRC28-212ENST00000558911 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
LRRC28-212ENST00000558911 LINC01546A6NGU7 62 aa0.71□□□□□ -2.3
LRRC28-212ENST00000558911 WT1-ASQ06250 92 aa0.69□□□□□ -2.3
LRRC28-212ENST00000558911 KRTAP19-2Q3LHN2 52 aa0.69□□□□□ -2.3
LRRC28-212ENST00000558911 DEFB106AQ8N104 65 aa0.69□□□□□ -2.3
LRRC28-212ENST00000558911 S4R3F8 94 aa0.68□□□□□ -2.3
LRRC28-212ENST00000558911 U3KQA8 63 aa0.68□□□□□ -2.3
LRRC28-212ENST00000558911 DEFB135Q30KP9 77 aa0.67□□□□□ -2.3
LRRC28-212ENST00000558911 PRLHP81277 87 aa0.64□□□□□ -2.31
LRRC28-212ENST00000558911 Q9Y3F1 56 aa0.64□□□□□ -2.31
LRRC28-212ENST00000558911 H0YGG7 62 aa0.63□□□□□ -2.31
LRRC28-212ENST00000558911 PRM1P04553 51 aa0.63□□□□□ -2.31
LRRC28-212ENST00000558911 H3BUA1 57 aa0.62□□□□□ -2.31
LRRC28-212ENST00000558911 WFDC10BQ8IUB3 73 aa0.62□□□□□ -2.31
LRRC28-212ENST00000558911 SMIM2Q9BVW6 85 aa0.62□□□□□ -2.31
LRRC28-212ENST00000558911 KAAG1Q9UBP8 84 aa0.62□□□□□ -2.31
LRRC28-212ENST00000558911 CD52P31358 61 aa0.59□□□□□ -2.31
LRRC28-212ENST00000558911 NDUFA1O15239 70 aa0.56□□□□□ -2.32
LRRC28-212ENST00000558911 MT1FP04733 61 aa0.56□□□□□ -2.32
LRRC28-212ENST00000558911 KRTAP8-1Q8IUC2 63 aa0.56□□□□□ -2.32
LRRC28-212ENST00000558911 MT2AP02795 61 aa0.55□□□□□ -2.32
LRRC28-212ENST00000558911 NOP10Q9NPE3 64 aaKnown RBP0.53□□□□□ -2.32
LRRC28-212ENST00000558911 IGLV5-48A0A075B6I7 105 aa0.52□□□□□ -2.33
LRRC28-212ENST00000558911 MMP24-AS1A0A0U1RRL7 71 aa0.52□□□□□ -2.33
LRRC28-212ENST00000558911 DEFB131AP59861 70 aa0.49□□□□□ -2.33
LRRC28-212ENST00000558911 DEFB108AA8MXU0 73 aa0.48□□□□□ -2.33
LRRC28-212ENST00000558911 H3BNG1 76 aa0.48□□□□□ -2.33
LRRC28-212ENST00000558911 M0QY20 66 aa0.47□□□□□ -2.33
LRRC28-212ENST00000558911 DEFB133Q30KQ1 61 aa0.45□□□□□ -2.34
LRRC28-212ENST00000558911 C9orf92A6NGG3 77 aa0.44□□□□□ -2.34
LRRC28-212ENST00000558911 SNRPGP62308 76 aaKnown RBP0.4□□□□□ -2.35
LRRC28-212ENST00000558911 A8MTW9 85 aa0.39□□□□□ -2.35
LRRC28-212ENST00000558911 POLR2KP53803 58 aaKnown RBP0.38□□□□□ -2.35
LRRC28-212ENST00000558911 DEFB110Q30KQ9 67 aa0.38□□□□□ -2.35
LRRC28-212ENST00000558911 TNP1P09430 55 aa0.37□□□□□ -2.35
LRRC28-212ENST00000558911 M0QZ58 72 aa0.36□□□□□ -2.35
LRRC28-212ENST00000558911 CLPSL2Q6UWE3 100 aa0.35□□□□□ -2.35
LRRC28-212ENST00000558911 RPL39P62891 51 aaKnown RBP0.34□□□□□ -2.36
LRRC28-212ENST00000558911 KRTAP6-2Q3LI66 62 aa0.34□□□□□ -2.36
LRRC28-212ENST00000558911 RPL39LQ96EH5 51 aaKnown RBP0.3□□□□□ -2.36
LRRC28-212ENST00000558911 COX14Q96I36 57 aa0.28□□□□□ -2.36
LRRC28-212ENST00000558911 TOMM7Q9P0U1 55 aa0.26□□□□□ -2.37
LRRC28-212ENST00000558911 MT1AP04731 61 aa0.25□□□□□ -2.37
LRRC28-212ENST00000558911 MT1BP07438 61 aa0.25□□□□□ -2.37
LRRC28-212ENST00000558911 LEAP2Q969E1 77 aa0.25□□□□□ -2.37
LRRC28-212ENST00000558911 DEFB108BQ8NET1 73 aa0.24□□□□□ -2.37
LRRC28-212ENST00000558911 DEFB136Q30KP8 78 aa0.23□□□□□ -2.37
LRRC28-212ENST00000558911 SPART-AS1P0CW21 52 aa0.22□□□□□ -2.37
LRRC28-212ENST00000558911 DEFB1P60022 68 aa0.22□□□□□ -2.37
LRRC28-212ENST00000558911 H3BSH0 61 aa0.21□□□□□ -2.38
LRRC28-212ENST00000558911 H3BUX3 64 aa0.21□□□□□ -2.38
LRRC28-212ENST00000558911 DEFB4AO15263 64 aa0.21□□□□□ -2.38
LRRC28-212ENST00000558911 LINC01590Q5TEZ4 76 aa0.21□□□□□ -2.38
LRRC28-212ENST00000558911 TTTY10Q9BZA0 68 aa0.21□□□□□ -2.38
LRRC28-212ENST00000558911 APELAP0DMC3 54 aa0.2□□□□□ -2.38
LRRC28-212ENST00000558911 RPL39P5Q59GN2 51 aa0.19□□□□□ -2.38
LRRC28-212ENST00000558911 K7EIM0 57 aa0.18□□□□□ -2.38
LRRC28-212ENST00000558911 A0A096LPF7 62 aa0.17□□□□□ -2.38
LRRC28-212ENST00000558911 TMEM167AQ8TBQ9 72 aa0.17□□□□□ -2.38
LRRC28-212ENST00000558911 SPRR2GQ9BYE4 73 aa0.17□□□□□ -2.38
LRRC28-212ENST00000558911 HTN3P15516 51 aa0.16□□□□□ -2.38
LRRC28-212ENST00000558911 ARHGAP5-AS1Q96IT6 56 aa0.16□□□□□ -2.38
LRRC28-212ENST00000558911 RHPN1-AS1Q9BWJ2 59 aa0.16□□□□□ -2.38
LRRC28-212ENST00000558911 A0A096LNI7 61 aa0.15□□□□□ -2.39
LRRC28-212ENST00000558911 KRTAP19-5Q3LI72 72 aa0.15□□□□□ -2.39
LRRC28-212ENST00000558911 MT1XP80297 61 aa0.14□□□□□ -2.39
LRRC28-212ENST00000558911 PRCDQ00LT1 54 aa0.14□□□□□ -2.39
LRRC28-212ENST00000558911 HTN1P15515 57 aa0.13□□□□□ -2.39
LRRC28-212ENST00000558911 KRTAP19-8Q3LI54 63 aa0.13□□□□□ -2.39
LRRC28-212ENST00000558911 KRTAP19-7Q3SYF9 63 aa0.13□□□□□ -2.39
LRRC28-212ENST00000558911 LINC01556Q5JQF7 62 aa0.13□□□□□ -2.39
LRRC28-212ENST00000558911 MT1EP04732 61 aa0.11□□□□□ -2.39
LRRC28-212ENST00000558911 MT1MQ8N339 61 aa0.11□□□□□ -2.39
LRRC28-212ENST00000558911 KRTAP6-1Q3LI64 71 aa0.1□□□□□ -2.39
LRRC28-212ENST00000558911 MT1LQ93083 61 aa0.1□□□□□ -2.39
LRRC28-212ENST00000558911 MT1GP13640 62 aa0.09□□□□□ -2.4
LRRC28-212ENST00000558911 RPS29P62273 56 aaKnown RBP0.07□□□□□ -2.4
Retrieved 78 of 20,778 RNA–protein pairs in 51.5 ms