RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 LINC00308Q8TCZ7 52 aa0.02□□□□□ -2.41
HIF1A-204ENST00000539097 ABRACLQ9P1F3 81 aa0.02□□□□□ -2.41
HIF1A-204ENST00000539097 NDUFA1O15239 70 aa0.01□□□□□ -2.41
HIF1A-204ENST00000539097 SPINK1P00995 79 aa0.01□□□□□ -2.41
HIF1A-204ENST00000539097 PRLHP81277 87 aa0.01□□□□□ -2.41
HIF1A-204ENST00000539097 KRTAP6-1Q3LI64 71 aa0.01□□□□□ -2.41
HIF1A-204ENST00000539097 TOMM5Q8N4H5 51 aa0.01□□□□□ -2.41
HIF1A-204ENST00000539097 PRO0255Q9UI72 69 aa0.01□□□□□ -2.41
HIF1A-204ENST00000539097 H0YGX0 51 aa0□□□□□ -2.41
HIF1A-204ENST00000539097 GNG13Q9P2W3 67 aa0□□□□□ -2.41
HIF1A-204ENST00000539097 KLK9Q2XQG4 91 aa0□□□□□ -2.41
HIF1A-204ENST00000539097 MT1BP07438 61 aa-0.01□□□□□ -2.41
HIF1A-204ENST00000539097 IAPPP10997 89 aa-0.01□□□□□ -2.41
HIF1A-204ENST00000539097 SMIM2Q9BVW6 85 aa-0.01□□□□□ -2.41
HIF1A-204ENST00000539097 POLR2KP53803 58 aaKnown RBP-0.01□□□□□ -2.41
HIF1A-204ENST00000539097 C6orf48Q9UBA6 75 aa-0.01□□□□□ -2.41
HIF1A-204ENST00000539097 TMEM167BQ9NRX6 74 aa-0.02□□□□□ -2.41
HIF1A-204ENST00000539097 Q9Y3F1 56 aa-0.02□□□□□ -2.41
HIF1A-204ENST00000539097 APLNQ9ULZ1 77 aa-0.03□□□□□ -2.41
HIF1A-204ENST00000539097 MT1EP04732 61 aa-0.03□□□□□ -2.41
HIF1A-204ENST00000539097 MRPL33O75394 65 aaKnown RBP-0.04□□□□□ -2.42
HIF1A-204ENST00000539097 KRTAP19-8Q3LI54 63 aa-0.04□□□□□ -2.42
HIF1A-204ENST00000539097 RPL38P63173 70 aaKnown RBP-0.04□□□□□ -2.42
HIF1A-204ENST00000539097 DEFB109BQ30KR1 87 aa-0.04□□□□□ -2.42
HIF1A-204ENST00000539097 MINOS1Q5TGZ0 78 aa-0.04□□□□□ -2.42
HIF1A-204ENST00000539097 C9orf92A6NGG3 77 aa-0.06□□□□□ -2.42
HIF1A-204ENST00000539097 A8MTW9 85 aa-0.06□□□□□ -2.42
HIF1A-204ENST00000539097 RPL39P62891 51 aaKnown RBP-0.06□□□□□ -2.42
HIF1A-204ENST00000539097 MT1MQ8N339 61 aa-0.06□□□□□ -2.42
HIF1A-204ENST00000539097 DEFB131AP59861 70 aa-0.07□□□□□ -2.42
HIF1A-204ENST00000539097 KRTAP19-7Q3SYF9 63 aa-0.07□□□□□ -2.42
HIF1A-204ENST00000539097 LINC01590Q5TEZ4 76 aa-0.08□□□□□ -2.42
HIF1A-204ENST00000539097 RPL39LQ96EH5 51 aaKnown RBP-0.08□□□□□ -2.42
HIF1A-204ENST00000539097 MT1GP13640 62 aa-0.08□□□□□ -2.42
HIF1A-204ENST00000539097 M0QY20 66 aa-0.08□□□□□ -2.42
HIF1A-204ENST00000539097 M0QZ58 72 aa-0.09□□□□□ -2.42
HIF1A-204ENST00000539097 MT1LQ93083 61 aa-0.09□□□□□ -2.42
HIF1A-204ENST00000539097 MT1XP80297 61 aa-0.09□□□□□ -2.42
HIF1A-204ENST00000539097 DEFB108AA8MXU0 73 aa-0.1□□□□□ -2.42
HIF1A-204ENST00000539097 STATHP02808 62 aa-0.1□□□□□ -2.42
HIF1A-204ENST00000539097 WFDC10BQ8IUB3 73 aa-0.1□□□□□ -2.42
HIF1A-204ENST00000539097 H3BUA1 57 aa-0.1□□□□□ -2.43
HIF1A-204ENST00000539097 DEFB106AQ8N104 65 aa-0.1□□□□□ -2.43
HIF1A-204ENST00000539097 DEFB135Q30KP9 77 aa-0.1□□□□□ -2.43
HIF1A-204ENST00000539097 KAAG1Q9UBP8 84 aa-0.1□□□□□ -2.43
HIF1A-204ENST00000539097 ARHGAP5-AS1Q96IT6 56 aa-0.12□□□□□ -2.43
HIF1A-204ENST00000539097 RPS29P62273 56 aaKnown RBP-0.13□□□□□ -2.43
HIF1A-204ENST00000539097 K7EIM0 57 aa-0.13□□□□□ -2.43
HIF1A-204ENST00000539097 TNP1P09430 55 aa-0.14□□□□□ -2.43
HIF1A-204ENST00000539097 LEAP2Q969E1 77 aa-0.14□□□□□ -2.43
HIF1A-204ENST00000539097 NOP10Q9NPE3 64 aaKnown RBP-0.15□□□□□ -2.43
HIF1A-204ENST00000539097 PRCDQ00LT1 54 aa-0.16□□□□□ -2.43
HIF1A-204ENST00000539097 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.16□□□□□ -2.43
HIF1A-204ENST00000539097 H3BNG1 76 aa-0.17□□□□□ -2.44
HIF1A-204ENST00000539097 DEFB108BQ8NET1 73 aa-0.19□□□□□ -2.44
HIF1A-204ENST00000539097 CD52P31358 61 aa-0.2□□□□□ -2.44
HIF1A-204ENST00000539097 TMEM167AQ8TBQ9 72 aa-0.21□□□□□ -2.44
HIF1A-204ENST00000539097 DEFB110Q30KQ9 67 aa-0.21□□□□□ -2.44
HIF1A-204ENST00000539097 TTTY10Q9BZA0 68 aa-0.21□□□□□ -2.44
HIF1A-204ENST00000539097 DEFB136Q30KP8 78 aa-0.21□□□□□ -2.44
HIF1A-204ENST00000539097 H0YGG7 62 aa-0.24□□□□□ -2.45
HIF1A-204ENST00000539097 DEFB1P60022 68 aa-0.24□□□□□ -2.45
HIF1A-204ENST00000539097 TOMM7Q9P0U1 55 aa-0.24□□□□□ -2.45
HIF1A-204ENST00000539097 H3BSH0 61 aa-0.24□□□□□ -2.45
HIF1A-204ENST00000539097 RPL39P5Q59GN2 51 aa-0.24□□□□□ -2.45
HIF1A-204ENST00000539097 DEFB133Q30KQ1 61 aa-0.26□□□□□ -2.45
HIF1A-204ENST00000539097 COX14Q96I36 57 aa-0.26□□□□□ -2.45
HIF1A-204ENST00000539097 H3BUX3 64 aa-0.28□□□□□ -2.45
HIF1A-204ENST00000539097 DEFB4AO15263 64 aa-0.28□□□□□ -2.45
HIF1A-204ENST00000539097 SPART-AS1P0CW21 52 aa-0.29□□□□□ -2.46
HIF1A-204ENST00000539097 A0A096LNI7 61 aa-0.29□□□□□ -2.46
HIF1A-204ENST00000539097 A0A096LPF7 62 aa-0.31□□□□□ -2.46
HIF1A-204ENST00000539097 RHPN1-AS1Q9BWJ2 59 aa-0.32□□□□□ -2.46
HIF1A-204ENST00000539097 LINC01556Q5JQF7 62 aa-0.33□□□□□ -2.46
HIF1A-204ENST00000539097 HTN3P15516 51 aa-0.35□□□□□ -2.47
HIF1A-204ENST00000539097 APELAP0DMC3 54 aa-0.36□□□□□ -2.47
HIF1A-204ENST00000539097 HTN1P15515 57 aa-0.44□□□□□ -2.48
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms