RNA–Protein interactions for RNA: ENST00000530549.1

LINC00964-207, long intergenic non-protein coding RNA 964, humanhuman

TSL 2

Gene LINC00964, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00964-207ENST00000530549 USH2AO75445 5202 aa0.68□□□□□ -2.3
LINC00964-207ENST00000530549 LOC400499M0QZD8 3231 aa0.68□□□□□ -2.3
LINC00964-207ENST00000530549 RPS29P62273 56 aaKnown RBP0.68□□□□□ -2.3
LINC00964-207ENST00000530549 DNAH8Q96JB1 4490 aa0.68□□□□□ -2.3
LINC00964-207ENST00000530549 LAMA5O15230 3695 aa0.67□□□□□ -2.3
LINC00964-207ENST00000530549 SMG1Q96Q15 3661 aaKnown RBP0.67□□□□□ -2.3
LINC00964-207ENST00000530549 SMR3BP02814 79 aaPredicted RBP0.67□□□□□ -2.3
LINC00964-207ENST00000530549 SPRR2AP35326 72 aa0.67□□□□□ -2.3
LINC00964-207ENST00000530549 DEFB133Q30KQ1 61 aa0.67□□□□□ -2.3
LINC00964-207ENST00000530549 MYO15AQ9UKN7 3530 aa0.67□□□□□ -2.3
LINC00964-207ENST00000530549 CDH23Q9H251 3354 aa0.67□□□□□ -2.3
LINC00964-207ENST00000530549 MUC12Q9UKN1 5478 aa0.67□□□□□ -2.3
LINC00964-207ENST00000530549 XIRP2A4UGR9 3374 aa0.66□□□□□ -2.3
LINC00964-207ENST00000530549 MAP1AP78559 2803 aaPredicted RBP0.66□□□□□ -2.3
LINC00964-207ENST00000530549 FLGP20930 4061 aaPredicted RBP0.66□□□□□ -2.3
LINC00964-207ENST00000530549 WDFY3Q8IZQ1 3526 aa0.66□□□□□ -2.3
LINC00964-207ENST00000530549 SVEP1Q4LDE5 3571 aa0.65□□□□□ -2.3
LINC00964-207ENST00000530549 CSMD2Q7Z408 3487 aa0.65□□□□□ -2.31
LINC00964-207ENST00000530549 LPAP08519 4548 aa0.65□□□□□ -2.31
LINC00964-207ENST00000530549 DNAH6Q9C0G6 4158 aa0.65□□□□□ -2.31
LINC00964-207ENST00000530549 HSPG2P98160 4391 aa0.64□□□□□ -2.31
LINC00964-207ENST00000530549 LAMA1P25391 3075 aa0.64□□□□□ -2.31
LINC00964-207ENST00000530549 CENPEQ02224 2701 aa0.64□□□□□ -2.31
LINC00964-207ENST00000530549 KRTAP19-5Q3LI72 72 aa0.64□□□□□ -2.31
LINC00964-207ENST00000530549 LINC01556Q5JQF7 62 aa0.64□□□□□ -2.31
LINC00964-207ENST00000530549 DEFB108BQ8NET1 73 aa0.64□□□□□ -2.31
LINC00964-207ENST00000530549 KRTAP6-2Q3LI66 62 aa0.63□□□□□ -2.31
LINC00964-207ENST00000530549 HRNRQ86YZ3 2850 aaPredicted RBP0.62□□□□□ -2.31
LINC00964-207ENST00000530549 LRP1Q07954 4544 aaKnown RBP0.62□□□□□ -2.31
LINC00964-207ENST00000530549 FAT3Q8TDW7 4589 aa0.62□□□□□ -2.31
LINC00964-207ENST00000530549 DNAH9Q9NYC9 4486 aa0.62□□□□□ -2.31
LINC00964-207ENST00000530549 VPS13CQ709C8 3753 aa0.62□□□□□ -2.31
LINC00964-207ENST00000530549 SYNE1Q8NF91 8797 aaKnown RBP0.62□□□□□ -2.31
LINC00964-207ENST00000530549 ATMQ13315 3056 aa0.61□□□□□ -2.31
LINC00964-207ENST00000530549 PKHD1P08F94 4074 aa0.61□□□□□ -2.31
LINC00964-207ENST00000530549 A0A096LPF7 62 aa0.59□□□□□ -2.31
LINC00964-207ENST00000530549 CD52P31358 61 aa0.59□□□□□ -2.31
LINC00964-207ENST00000530549 SPRR2FQ96RM1 72 aa0.59□□□□□ -2.31
LINC00964-207ENST00000530549 TRIOO75962 3097 aa0.59□□□□□ -2.32
LINC00964-207ENST00000530549 DNAH1Q9P2D7 4330 aa0.58□□□□□ -2.32
LINC00964-207ENST00000530549 ADGRG4Q8IZF6 3080 aa0.58□□□□□ -2.32
LINC00964-207ENST00000530549 PRUNE2Q8WUY3 3088 aa0.58□□□□□ -2.32
LINC00964-207ENST00000530549 SPRR2EP22531 72 aa0.58□□□□□ -2.32
LINC00964-207ENST00000530549 APOBP04114 4563 aaKnown RBP0.58□□□□□ -2.32
LINC00964-207ENST00000530549 CMYA5Q8N3K9 4069 aa0.57□□□□□ -2.32
LINC00964-207ENST00000530549 DNAH10Q8IVF4 4471 aa0.56□□□□□ -2.32
LINC00964-207ENST00000530549 PHGR1C9JFL3 82 aa0.53□□□□□ -2.32
LINC00964-207ENST00000530549 PLECQ15149 4684 aaKnown RBP0.53□□□□□ -2.32
LINC00964-207ENST00000530549 LRP1BQ9NZR2 4599 aa0.52□□□□□ -2.33
LINC00964-207ENST00000530549 TRRAPQ9Y4A5 3859 aa0.51□□□□□ -2.33
LINC00964-207ENST00000530549 DMDP11532 3685 aa0.5□□□□□ -2.33
LINC00964-207ENST00000530549 FAT1Q14517 4588 aa0.5□□□□□ -2.33
LINC00964-207ENST00000530549 MT1EP04732 61 aa0.49□□□□□ -2.33
LINC00964-207ENST00000530549 MT1HP80294 61 aa0.47□□□□□ -2.33
LINC00964-207ENST00000530549 DNAH5Q8TE73 4624 aa0.45□□□□□ -2.34
LINC00964-207ENST00000530549 DNAH17Q9UFH2 4485 aa0.45□□□□□ -2.34
LINC00964-207ENST00000530549 MT1LQ93083 61 aa0.44□□□□□ -2.34
LINC00964-207ENST00000530549 HTN3P15516 51 aa0.42□□□□□ -2.34
LINC00964-207ENST00000530549 MUC17Q685J3 4493 aa0.41□□□□□ -2.34
LINC00964-207ENST00000530549 DYNC1H1Q14204 4646 aaKnown RBP0.41□□□□□ -2.34
LINC00964-207ENST00000530549 DEFB4AO15263 64 aa0.4□□□□□ -2.35
LINC00964-207ENST00000530549 KRTAP19-6Q3LI70 58 aa0.4□□□□□ -2.35
LINC00964-207ENST00000530549 LRP2P98164 4655 aa0.39□□□□□ -2.35
LINC00964-207ENST00000530549 STARD9Q9P2P6 4700 aa0.38□□□□□ -2.35
LINC00964-207ENST00000530549 MT4P47944 62 aa0.36□□□□□ -2.35
LINC00964-207ENST00000530549 MT1XP80297 61 aa0.36□□□□□ -2.35
LINC00964-207ENST00000530549 SPRR2GQ9BYE4 73 aa0.36□□□□□ -2.35
LINC00964-207ENST00000530549 KRTAP19-8Q3LI54 63 aa0.25□□□□□ -2.37
LINC00964-207ENST00000530549 MT1GP13640 62 aa0.23□□□□□ -2.37
LINC00964-207ENST00000530549 MT2AP02795 61 aa0.22□□□□□ -2.37
LINC00964-207ENST00000530549 KRTAP19-7Q3SYF9 63 aa0.22□□□□□ -2.37
LINC00964-207ENST00000530549 MT1MQ8N339 61 aa0.21□□□□□ -2.38
LINC00964-207ENST00000530549 KRTAP6-1Q3LI64 71 aa0.19□□□□□ -2.38
LINC00964-207ENST00000530549 MT1HL1P0DM35 61 aa0.18□□□□□ -2.38
LINC00964-207ENST00000530549 MT1BP07438 61 aa0.11□□□□□ -2.39
LINC00964-207ENST00000530549 KRTAP19-2Q3LHN2 52 aa0.09□□□□□ -2.4
LINC00964-207ENST00000530549 KRTAP20-2Q3LI61 65 aa0.09□□□□□ -2.4
LINC00964-207ENST00000530549 MT1FP04733 61 aa0.06□□□□□ -2.4
Retrieved 78 of 20,778 RNA–protein pairs in 50.8 ms