RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 SPINK6Q6UWN8 80 aa0.75□□□□□ -2.29
SQLE-204ENST00000520493 ENHOQ6UWT2 76 aa0.75□□□□□ -2.29
SQLE-204ENST00000520493 UBL5Q9BZL1 73 aa0.75□□□□□ -2.29
SQLE-204ENST00000520493 DEFB131BA0A096LNP1 70 aa0.74□□□□□ -2.29
SQLE-204ENST00000520493 CLPSL2Q6UWE3 100 aa0.74□□□□□ -2.29
SQLE-204ENST00000520493 C6orf48Q9UBA6 75 aa0.74□□□□□ -2.29
SQLE-204ENST00000520493 DNAH6Q9C0G6 4158 aa0.74□□□□□ -2.29
SQLE-204ENST00000520493 ETDCA0A1B0GVM5 59 aa0.73□□□□□ -2.29
SQLE-204ENST00000520493 NREPQ16612 68 aa0.73□□□□□ -2.29
SQLE-204ENST00000520493 LINC01556Q5JQF7 62 aa0.73□□□□□ -2.29
SQLE-204ENST00000520493 WFDC10BQ8IUB3 73 aa0.73□□□□□ -2.29
SQLE-204ENST00000520493 KCNQ1DNQ9H478 68 aa0.73□□□□□ -2.29
SQLE-204ENST00000520493 IGLV5-48A0A075B6I7 105 aa0.72□□□□□ -2.29
SQLE-204ENST00000520493 DEFB105AQ8NG35 78 aa0.72□□□□□ -2.29
SQLE-204ENST00000520493 SPRR1AP35321 89 aa0.71□□□□□ -2.3
SQLE-204ENST00000520493 A0A1B0GU69 56 aa0.7□□□□□ -2.3
SQLE-204ENST00000520493 NDUFB1O75438 58 aa0.7□□□□□ -2.3
SQLE-204ENST00000520493 SPRR1BP22528 89 aa0.7□□□□□ -2.3
SQLE-204ENST00000520493 MT4P47944 62 aa0.7□□□□□ -2.3
SQLE-204ENST00000520493 APLNQ9ULZ1 77 aa0.7□□□□□ -2.3
SQLE-204ENST00000520493 MUC17Q685J3 4493 aa0.7□□□□□ -2.3
SQLE-204ENST00000520493 A0A096LNI7 61 aa0.69□□□□□ -2.3
SQLE-204ENST00000520493 PRLHP81277 87 aa0.69□□□□□ -2.3
SQLE-204ENST00000520493 LPAP08519 4548 aa0.68□□□□□ -2.3
SQLE-204ENST00000520493 K7EQZ3 153 aa0.68□□□□□ -2.3
SQLE-204ENST00000520493 SPRR2EP22531 72 aa0.68□□□□□ -2.3
SQLE-204ENST00000520493 SPRR2BP35325 72 aa0.68□□□□□ -2.3
SQLE-204ENST00000520493 SPRR2AP35326 72 aa0.68□□□□□ -2.3
SQLE-204ENST00000520493 WFDC13Q8IUB5 93 aa0.68□□□□□ -2.3
SQLE-204ENST00000520493 DNAH11Q96DT5 4516 aa0.68□□□□□ -2.3
SQLE-204ENST00000520493 SPRR2DP22532 72 aa0.67□□□□□ -2.3
SQLE-204ENST00000520493 VPS13DQ5THJ4 4388 aa0.66□□□□□ -2.3
SQLE-204ENST00000520493 DNAH3Q8TD57 4116 aa0.66□□□□□ -2.3
SQLE-204ENST00000520493 MMP24-AS1A0A0U1RRL7 71 aa0.66□□□□□ -2.3
SQLE-204ENST00000520493 MRPL34Q9BQ48 92 aaKnown RBP0.66□□□□□ -2.3
SQLE-204ENST00000520493 TNXBP22105 4242 aa0.65□□□□□ -2.31
SQLE-204ENST00000520493 Q5VSD8 79 aa0.65□□□□□ -2.31
SQLE-204ENST00000520493 SPINK1P00995 79 aa0.64□□□□□ -2.31
SQLE-204ENST00000520493 DNAH17Q9UFH2 4485 aa0.63□□□□□ -2.31
SQLE-204ENST00000520493 RPS29P62273 56 aaKnown RBP0.63□□□□□ -2.31
SQLE-204ENST00000520493 DNAH2Q9P225 4427 aa0.62□□□□□ -2.31
SQLE-204ENST00000520493 VPS13BQ7Z7G8 4022 aa0.61□□□□□ -2.31
SQLE-204ENST00000520493 C9orf92A6NGG3 77 aa0.6□□□□□ -2.31
SQLE-204ENST00000520493 SMR3BP02814 79 aaPredicted RBP0.6□□□□□ -2.31
SQLE-204ENST00000520493 COX6B2Q6YFQ2 88 aa0.6□□□□□ -2.31
SQLE-204ENST00000520493 H1FX-AS1Q4G0G2 97 aa0.59□□□□□ -2.31
SQLE-204ENST00000520493 SYNE1Q8NF91 8797 aaKnown RBP0.59□□□□□ -2.32
SQLE-204ENST00000520493 DNAH8Q96JB1 4490 aa0.58□□□□□ -2.32
SQLE-204ENST00000520493 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
SQLE-204ENST00000520493 CRIPTQ9P021 101 aa0.57□□□□□ -2.32
SQLE-204ENST00000520493 H0YAA0 97 aa0.56□□□□□ -2.32
SQLE-204ENST00000520493 M0QZ58 72 aa0.56□□□□□ -2.32
SQLE-204ENST00000520493 S4R3F8 94 aa0.56□□□□□ -2.32
SQLE-204ENST00000520493 MT1HL1P0DM35 61 aa0.55□□□□□ -2.32
SQLE-204ENST00000520493 FLGP20930 4061 aaPredicted RBP0.49□□□□□ -2.33
SQLE-204ENST00000520493 M0R2T5 61 aa0.49□□□□□ -2.33
SQLE-204ENST00000520493 TNP1P09430 55 aa0.49□□□□□ -2.33
SQLE-204ENST00000520493 KRTAP19-2Q3LHN2 52 aa0.49□□□□□ -2.33
SQLE-204ENST00000520493 SPRR2FQ96RM1 72 aa0.47□□□□□ -2.33
SQLE-204ENST00000520493 SPRR2GQ9BYE4 73 aa0.47□□□□□ -2.33
SQLE-204ENST00000520493 MT2AP02795 61 aa0.46□□□□□ -2.34
SQLE-204ENST00000520493 MT1HP80294 61 aa0.46□□□□□ -2.34
SQLE-204ENST00000520493 MT1FP04733 61 aa0.45□□□□□ -2.34
SQLE-204ENST00000520493 KRTAP19-8Q3LI54 63 aa0.45□□□□□ -2.34
SQLE-204ENST00000520493 KRTAP8-1Q8IUC2 63 aa0.45□□□□□ -2.34
SQLE-204ENST00000520493 MT1BP07438 61 aa0.43□□□□□ -2.34
SQLE-204ENST00000520493 MT1XP80297 61 aa0.43□□□□□ -2.34
SQLE-204ENST00000520493 KRTAP19-5Q3LI72 72 aa0.41□□□□□ -2.34
SQLE-204ENST00000520493 KRTAP20-2Q3LI61 65 aa0.4□□□□□ -2.35
SQLE-204ENST00000520493 MT1EP04732 61 aa0.38□□□□□ -2.35
SQLE-204ENST00000520493 MT1GP13640 62 aa0.38□□□□□ -2.35
SQLE-204ENST00000520493 KRTAP19-7Q3SYF9 63 aa0.38□□□□□ -2.35
SQLE-204ENST00000520493 MT1LQ93083 61 aa0.38□□□□□ -2.35
SQLE-204ENST00000520493 MT1MQ8N339 61 aa0.35□□□□□ -2.35
SQLE-204ENST00000520493 MT1AP04731 61 aa0.34□□□□□ -2.36
SQLE-204ENST00000520493 KRTAP6-1Q3LI64 71 aa0.31□□□□□ -2.36
SQLE-204ENST00000520493 PRM1P04553 51 aa0.3□□□□□ -2.36
SQLE-204ENST00000520493 KRTAP6-2Q3LI66 62 aa0.29□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 72.8 ms