RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 ABCC1P33527 1531 aa-6.34□□□□□ -3.42
RNU6-542P-201ENST00000516405 ABCA6Q8N139 1617 aa-6.34□□□□□ -3.42
RNU6-542P-201ENST00000516405 DEFB104AQ8WTQ1 72 aa-6.34□□□□□ -3.42
RNU6-542P-201ENST00000516405 UGGT1Q9NYU2 1555 aa-6.35□□□□□ -3.43
RNU6-542P-201ENST00000516405 LINC00587B1AMM8 73 aa-6.37□□□□□ -3.43
RNU6-542P-201ENST00000516405 S100ZQ8WXG8 99 aa-6.38□□□□□ -3.43
RNU6-542P-201ENST00000516405 SERF2P84101 59 aa-6.39□□□□□ -3.43
RNU6-542P-201ENST00000516405 C14orf144Q96I85 54 aa-6.39□□□□□ -3.43
RNU6-542P-201ENST00000516405 ADCY10Q96PN6 1610 aa-6.39□□□□□ -3.43
RNU6-542P-201ENST00000516405 TOMM7Q9P0U1 55 aa-6.41□□□□□ -3.44
RNU6-542P-201ENST00000516405 DCAF1Q9Y4B6 1507 aa-6.41□□□□□ -3.44
RNU6-542P-201ENST00000516405 ABCA9Q8IUA7 1624 aa-6.42□□□□□ -3.44
RNU6-542P-201ENST00000516405 H0YGX0 51 aa-6.42□□□□□ -3.44
RNU6-542P-201ENST00000516405 S100A12P80511 92 aa-6.42□□□□□ -3.44
RNU6-542P-201ENST00000516405 LINC01549A6NIU2 74 aa-6.44□□□□□ -3.44
RNU6-542P-201ENST00000516405 ST20Q9HBF5 79 aa-6.44□□□□□ -3.44
RNU6-542P-201ENST00000516405 LINC01556Q5JQF7 62 aa-6.46□□□□□ -3.44
RNU6-542P-201ENST00000516405 HILPDAQ9Y5L2 63 aa-6.46□□□□□ -3.44
RNU6-542P-201ENST00000516405 M0R143 59 aa-6.47□□□□□ -3.45
RNU6-542P-201ENST00000516405 TRPM2O94759 1503 aa-6.48□□□□□ -3.45
RNU6-542P-201ENST00000516405 ADIRFQ15847 76 aa-6.5□□□□□ -3.45
RNU6-542P-201ENST00000516405 EFCAB10A6NFE3 127 aa-6.51□□□□□ -3.45
RNU6-542P-201ENST00000516405 GNG13Q9P2W3 67 aa-6.51□□□□□ -3.45
RNU6-542P-201ENST00000516405 PRXQ9BXM0 1461 aa-6.52□□□□□ -3.45
RNU6-542P-201ENST00000516405 ATP6V1G2-DDX39BF2Z307 99 aa-6.53□□□□□ -3.45
RNU6-542P-201ENST00000516405 C18orf32Q8TCD1 76 aa-6.53□□□□□ -3.45
RNU6-542P-201ENST00000516405 Q9H521 79 aa-6.53□□□□□ -3.45
RNU6-542P-201ENST00000516405 ABCA5Q8WWZ7 1642 aa-6.59□□□□□ -3.46
RNU6-542P-201ENST00000516405 IQGAP1P46940 1657 aa-6.59□□□□□ -3.46
RNU6-542P-201ENST00000516405 PKIAP61925 76 aa-6.66□□□□□ -3.48
RNU6-542P-201ENST00000516405 PDCD5O14737 125 aa-6.68□□□□□ -3.48
RNU6-542P-201ENST00000516405 PLNP26678 52 aa-6.68□□□□□ -3.48
RNU6-542P-201ENST00000516405 DUOX1Q9NRD9 1551 aa-6.69□□□□□ -3.48
RNU6-542P-201ENST00000516405 V9GYS6 101 aa-6.69□□□□□ -3.48
RNU6-542P-201ENST00000516405 IQGAP3Q86VI3 1631 aa-6.72□□□□□ -3.49
RNU6-542P-201ENST00000516405 S100A13Q99584 98 aa-6.74□□□□□ -3.49
RNU6-542P-201ENST00000516405 NDUFA1O15239 70 aa-6.78□□□□□ -3.49
RNU6-542P-201ENST00000516405 CPS1P31327 1500 aa-6.79□□□□□ -3.5
RNU6-542P-201ENST00000516405 TOP2AP11388 1531 aaKnown RBP-6.83□□□□□ -3.5
RNU6-542P-201ENST00000516405 ERICH3Q5RHP9 1530 aa-6.88□□□□□ -3.51
RNU6-542P-201ENST00000516405 UGGT2Q9NYU1 1516 aa-6.96□□□□□ -3.52
RNU6-542P-201ENST00000516405 ABCA10Q8WWZ4 1543 aa-7.03□□□□□ -3.54
RNU6-542P-201ENST00000516405 ATP7AQ04656 1500 aa-7.06□□□□□ -3.54
RNU6-542P-201ENST00000516405 ABCC8Q09428 1581 aa-7.08□□□□□ -3.54
RNU6-542P-201ENST00000516405 H3BUX3 64 aa-7.08□□□□□ -3.54
RNU6-542P-201ENST00000516405 RPL39P62891 51 aaKnown RBP-7.08□□□□□ -3.54
RNU6-542P-201ENST00000516405 SAMD9LQ8IVG5 1584 aa-7.11□□□□□ -3.55
RNU6-542P-201ENST00000516405 APELAP0DMC3 54 aa-7.11□□□□□ -3.55
RNU6-542P-201ENST00000516405 FANCD2Q9BXW9 1451 aa-7.13□□□□□ -3.55
RNU6-542P-201ENST00000516405 A0A096LPF7 62 aa-7.2□□□□□ -3.56
RNU6-542P-201ENST00000516405 SMCO4Q9NRQ5 59 aa-7.21□□□□□ -3.56
RNU6-542P-201ENST00000516405 MROH2BQ7Z745 1585 aa-7.25□□□□□ -3.57
RNU6-542P-201ENST00000516405 RPL39LQ96EH5 51 aaKnown RBP-7.25□□□□□ -3.57
RNU6-542P-201ENST00000516405 A0A087WWC5 75 aa-7.26□□□□□ -3.57
RNU6-542P-201ENST00000516405 CCDC18Q5T9S5 1454 aa-7.26□□□□□ -3.57
RNU6-542P-201ENST00000516405 EFCAB5A4FU69 1503 aa-7.27□□□□□ -3.57
RNU6-542P-201ENST00000516405 CMC2Q9NRP2 79 aa-7.33□□□□□ -3.58
RNU6-542P-201ENST00000516405 HTN3P15516 51 aa-7.35□□□□□ -3.59
RNU6-542P-201ENST00000516405 GNG2P59768 71 aa-7.58□□□□□ -3.62
RNU6-542P-201ENST00000516405 SMIM5Q71RC9 77 aa-7.6□□□□□ -3.63
RNU6-542P-201ENST00000516405 K7EIM0 57 aa-7.68□□□□□ -3.64
RNU6-542P-201ENST00000516405 PRCDQ00LT1 54 aa-7.71□□□□□ -3.64
RNU6-542P-201ENST00000516405 H3BSH0 61 aa-7.78□□□□□ -3.65
RNU6-542P-201ENST00000516405 TMEM167AQ8TBQ9 72 aa-7.78□□□□□ -3.65
RNU6-542P-201ENST00000516405 ARHGAP5-AS1Q96IT6 56 aa-7.92□□□□□ -3.68
RNU6-542P-201ENST00000516405 IQGAP2Q13576 1575 aa-7.94□□□□□ -3.68
RNU6-542P-201ENST00000516405 Q9Y3F1 56 aa-7.99□□□□□ -3.69
RNU6-542P-201ENST00000516405 SNRPGP15A8MWD9 76 aa-8.04□□□□□ -3.7
RNU6-542P-201ENST00000516405 COX14Q96I36 57 aa-8.26□□□□□ -3.73
RNU6-542P-201ENST00000516405 RPL39P5Q59GN2 51 aa-8.42□□□□□ -3.76
RNU6-542P-201ENST00000516405 DEFB108AA8MXU0 73 aa-8.49□□□□□ -3.77
RNU6-542P-201ENST00000516405 DEFB108BQ8NET1 73 aa-8.52□□□□□ -3.77
RNU6-542P-201ENST00000516405 SNRPGP62308 76 aaKnown RBP-8.54□□□□□ -3.78
RNU6-542P-201ENST00000516405 TOMM5Q8N4H5 51 aa-8.57□□□□□ -3.78
RNU6-542P-201ENST00000516405 GCC2Q8IWJ2 1684 aa-8.62□□□□□ -3.79
RNU6-542P-201ENST00000516405 SMIM31A0A1B0GVY4 71 aa-8.74□□□□□ -3.81
RNU6-542P-201ENST00000516405 STATHP02808 62 aa-8.8□□□□□ -3.82
Retrieved 77 of 20,778 RNA–protein pairs in 7 ms