RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 RPS27P42677 84 aaKnown RBP-0.22□□□□□ -2.44
TOPBP1-204ENST00000505804 MINOS1Q5TGZ0 78 aa-0.22□□□□□ -2.44
TOPBP1-204ENST00000505804 RPS27LQ71UM5 84 aaKnown RBP-0.22□□□□□ -2.44
TOPBP1-204ENST00000505804 WT1-ASQ06250 92 aa-0.23□□□□□ -2.45
TOPBP1-204ENST00000505804 MT1LQ93083 61 aa-0.23□□□□□ -2.45
TOPBP1-204ENST00000505804 Q9Y3F1 56 aa-0.23□□□□□ -2.45
TOPBP1-204ENST00000505804 RPS29P62273 56 aaKnown RBP-0.24□□□□□ -2.45
TOPBP1-204ENST00000505804 C6orf48Q9UBA6 75 aa-0.24□□□□□ -2.45
TOPBP1-204ENST00000505804 LINC01549A6NIU2 74 aa-0.25□□□□□ -2.45
TOPBP1-204ENST00000505804 NCBP2-AS2Q69YL0 99 aa-0.25□□□□□ -2.45
TOPBP1-204ENST00000505804 H3BSH0 61 aa-0.26□□□□□ -2.45
TOPBP1-204ENST00000505804 FCER1GP30273 86 aa-0.26□□□□□ -2.45
TOPBP1-204ENST00000505804 CD52P31358 61 aa-0.26□□□□□ -2.45
TOPBP1-204ENST00000505804 DEFB133Q30KQ1 61 aa-0.27□□□□□ -2.45
TOPBP1-204ENST00000505804 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.27□□□□□ -2.45
TOPBP1-204ENST00000505804 A0A087WWC5 75 aa-0.28□□□□□ -2.45
TOPBP1-204ENST00000505804 H3BUA1 57 aa-0.28□□□□□ -2.45
TOPBP1-204ENST00000505804 K7EMI3 77 aa-0.28□□□□□ -2.45
TOPBP1-204ENST00000505804 SFTA3P0C7M3 94 aa-0.28□□□□□ -2.45
TOPBP1-204ENST00000505804 KRTAP19-5Q3LI72 72 aa-0.28□□□□□ -2.45
TOPBP1-204ENST00000505804 TTTY10Q9BZA0 68 aa-0.28□□□□□ -2.45
TOPBP1-204ENST00000505804 IGLV5-48A0A075B6I7 105 aa-0.29□□□□□ -2.46
TOPBP1-204ENST00000505804 DEFB110Q30KQ9 67 aa-0.29□□□□□ -2.46
TOPBP1-204ENST00000505804 DEFB108BQ8NET1 73 aa-0.29□□□□□ -2.46
TOPBP1-204ENST00000505804 M0R1W7 72 aa-0.3□□□□□ -2.46
TOPBP1-204ENST00000505804 DEFB4AO15263 64 aa-0.3□□□□□ -2.46
TOPBP1-204ENST00000505804 SERF2P84101 59 aa-0.32□□□□□ -2.46
TOPBP1-204ENST00000505804 MMP24-AS1A0A0U1RRL7 71 aa-0.33□□□□□ -2.46
TOPBP1-204ENST00000505804 NMES1Q9C002 83 aa-0.33□□□□□ -2.46
TOPBP1-204ENST00000505804 NOP10Q9NPE3 64 aaKnown RBP-0.33□□□□□ -2.46
TOPBP1-204ENST00000505804 SMIM31A0A1B0GVY4 71 aa-0.34□□□□□ -2.46
TOPBP1-204ENST00000505804 IGIPA6NJ69 53 aa-0.34□□□□□ -2.46
TOPBP1-204ENST00000505804 TNP1P09430 55 aa-0.34□□□□□ -2.46
TOPBP1-204ENST00000505804 DEFB136Q30KP8 78 aa-0.34□□□□□ -2.46
TOPBP1-204ENST00000505804 S100ZQ8WXG8 99 aa-0.34□□□□□ -2.46
TOPBP1-204ENST00000505804 TMEM167BQ9NRX6 74 aa-0.34□□□□□ -2.46
TOPBP1-204ENST00000505804 H3BUX3 64 aa-0.37□□□□□ -2.47
TOPBP1-204ENST00000505804 HTN3P15516 51 aa-0.37□□□□□ -2.47
TOPBP1-204ENST00000505804 LINC00308Q8TCZ7 52 aa-0.37□□□□□ -2.47
TOPBP1-204ENST00000505804 GCC2Q8IWJ2 1684 aa-0.37□□□□□ -2.47
TOPBP1-204ENST00000505804 M0QY20 66 aa-0.38□□□□□ -2.47
TOPBP1-204ENST00000505804 CLPSL2Q6UWE3 100 aa-0.38□□□□□ -2.47
TOPBP1-204ENST00000505804 ABRACLQ9P1F3 81 aa-0.38□□□□□ -2.47
TOPBP1-204ENST00000505804 DEFB1P60022 68 aa-0.39□□□□□ -2.47
TOPBP1-204ENST00000505804 KAAG1Q9UBP8 84 aa-0.39□□□□□ -2.47
TOPBP1-204ENST00000505804 COX14Q96I36 57 aa-0.4□□□□□ -2.47
TOPBP1-204ENST00000505804 SMIM27A0A1W2PRY6 76 aa-0.41□□□□□ -2.48
TOPBP1-204ENST00000505804 H0YGX0 51 aa-0.41□□□□□ -2.48
TOPBP1-204ENST00000505804 SPART-AS1P0CW21 52 aa-0.41□□□□□ -2.48
TOPBP1-204ENST00000505804 A8MTW9 85 aa-0.42□□□□□ -2.48
TOPBP1-204ENST00000505804 M0QZ58 72 aa-0.42□□□□□ -2.48
TOPBP1-204ENST00000505804 LINC01556Q5JQF7 62 aa-0.42□□□□□ -2.48
TOPBP1-204ENST00000505804 WFDC10BQ8IUB3 73 aa-0.42□□□□□ -2.48
TOPBP1-204ENST00000505804 PLNP26678 52 aa-0.44□□□□□ -2.48
TOPBP1-204ENST00000505804 A0A096LPF7 62 aa-0.46□□□□□ -2.48
TOPBP1-204ENST00000505804 APELAP0DMC3 54 aa-0.46□□□□□ -2.48
TOPBP1-204ENST00000505804 LEAP2Q969E1 77 aa-0.47□□□□□ -2.48
TOPBP1-204ENST00000505804 A0A096LNI7 61 aa-0.48□□□□□ -2.49
TOPBP1-204ENST00000505804 LINC01546A6NGU7 62 aa-0.49□□□□□ -2.49
TOPBP1-204ENST00000505804 CMC2Q9NRP2 79 aa-0.49□□□□□ -2.49
TOPBP1-204ENST00000505804 DEFB131AP59861 70 aa-0.5□□□□□ -2.49
TOPBP1-204ENST00000505804 POLR2KP53803 58 aaKnown RBP-0.51□□□□□ -2.49
TOPBP1-204ENST00000505804 HTN1P15515 57 aa-0.53□□□□□ -2.49
TOPBP1-204ENST00000505804 SMIM2Q9BVW6 85 aa-0.54□□□□□ -2.5
TOPBP1-204ENST00000505804 SNRPGP15A8MWD9 76 aa-0.6□□□□□ -2.51
TOPBP1-204ENST00000505804 NDUFA1O15239 70 aa-0.6□□□□□ -2.51
TOPBP1-204ENST00000505804 RHPN1-AS1Q9BWJ2 59 aa-0.6□□□□□ -2.51
TOPBP1-204ENST00000505804 TMEM167AQ8TBQ9 72 aa-0.64□□□□□ -2.51
TOPBP1-204ENST00000505804 PRCDQ00LT1 54 aa-0.66□□□□□ -2.52
TOPBP1-204ENST00000505804 TOMM7Q9P0U1 55 aa-0.68□□□□□ -2.52
TOPBP1-204ENST00000505804 RPL39P62891 51 aaKnown RBP-0.7□□□□□ -2.52
TOPBP1-204ENST00000505804 RPL39LQ96EH5 51 aaKnown RBP-0.72□□□□□ -2.52
TOPBP1-204ENST00000505804 K7EIM0 57 aa-0.73□□□□□ -2.53
TOPBP1-204ENST00000505804 LINC01590Q5TEZ4 76 aa-0.73□□□□□ -2.53
TOPBP1-204ENST00000505804 TOMM5Q8N4H5 51 aa-0.73□□□□□ -2.53
TOPBP1-204ENST00000505804 RPL39P5Q59GN2 51 aa-0.75□□□□□ -2.53
TOPBP1-204ENST00000505804 ARHGAP5-AS1Q96IT6 56 aa-0.8□□□□□ -2.54
TOPBP1-204ENST00000505804 SNRPGP62308 76 aaKnown RBP-0.83□□□□□ -2.54
Retrieved 78 of 20,778 RNA–protein pairs in 145.8 ms