RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 FCGBPQ9Y6R7 5405 aaPredicted RBP2.27□□□□□ -2.05
MATR3-202ENST00000502422 KRTAP2-2Q9BYT5 123 aa2.26□□□□□ -2.05
MATR3-202ENST00000502422 KRTAP19-6Q3LI70 58 aa2.24□□□□□ -2.05
MATR3-202ENST00000502422 A0A0D9SG42 100 aa2.24□□□□□ -2.05
MATR3-202ENST00000502422 R4GN34 69 aa2.23□□□□□ -2.05
MATR3-202ENST00000502422 PRO2289Q9P1D8 64 aa2.21□□□□□ -2.06
MATR3-202ENST00000502422 MT3P25713 68 aa2.21□□□□□ -2.06
MATR3-202ENST00000502422 KRTAP12-2P59991 146 aa2.2□□□□□ -2.06
MATR3-202ENST00000502422 KRTAP10-10P60014 251 aa2.2□□□□□ -2.06
MATR3-202ENST00000502422 S4R3F8 94 aa2.2□□□□□ -2.06
MATR3-202ENST00000502422 MT2AP02795 61 aa2.19□□□□□ -2.06
MATR3-202ENST00000502422 MT1FP04733 61 aa2.17□□□□□ -2.06
MATR3-202ENST00000502422 KRTAP12-1P59990 96 aa2.17□□□□□ -2.06
MATR3-202ENST00000502422 KRTAP2-1Q9BYU5 128 aa2.17□□□□□ -2.06
MATR3-202ENST00000502422 NEBP20929 6669 aa2.16□□□□□ -2.06
MATR3-202ENST00000502422 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.06
MATR3-202ENST00000502422 PLAC4Q8WY50 150 aa2.13□□□□□ -2.07
MATR3-202ENST00000502422 LCE1FQ5T754 118 aa2.12□□□□□ -2.07
MATR3-202ENST00000502422 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
MATR3-202ENST00000502422 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
MATR3-202ENST00000502422 MUC12Q9UKN1 5478 aa2.1□□□□□ -2.07
MATR3-202ENST00000502422 M0QZ58 72 aa2.07□□□□□ -2.08
MATR3-202ENST00000502422 GPR98Q8WXG9 6306 aa2.06□□□□□ -2.08
MATR3-202ENST00000502422 INE1O15225 51 aa2.03□□□□□ -2.08
MATR3-202ENST00000502422 KRTAP10-12P60413 245 aa2.03□□□□□ -2.08
MATR3-202ENST00000502422 PP632Q6XCG6 107 aa2.01□□□□□ -2.09
MATR3-202ENST00000502422 SPRR5A0A1B0GTR4 108 aa2□□□□□ -2.09
MATR3-202ENST00000502422 MDN1Q9NU22 5596 aa2□□□□□ -2.09
MATR3-202ENST00000502422 KRTAP4-3Q9BYR4 195 aa2□□□□□ -2.09
MATR3-202ENST00000502422 KMT2DO14686 5537 aa1.99□□□□□ -2.09
MATR3-202ENST00000502422 LCE3CQ5T5A8 94 aa1.97□□□□□ -2.09
MATR3-202ENST00000502422 SPRR2EP22531 72 aa1.95□□□□□ -2.1
MATR3-202ENST00000502422 SPRR2BP35325 72 aa1.95□□□□□ -2.1
MATR3-202ENST00000502422 SPRR2AP35326 72 aa1.95□□□□□ -2.1
MATR3-202ENST00000502422 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
MATR3-202ENST00000502422 KRTAP10-5P60370 271 aa1.94□□□□□ -2.1
MATR3-202ENST00000502422 SPRR2FQ96RM1 72 aa1.94□□□□□ -2.1
MATR3-202ENST00000502422 MT1BP07438 61 aa1.93□□□□□ -2.1
MATR3-202ENST00000502422 SPRR2DP22532 72 aa1.9□□□□□ -2.11
MATR3-202ENST00000502422 KRTAP19-8Q3LI54 63 aa1.9□□□□□ -2.11
MATR3-202ENST00000502422 SPRR2GQ9BYE4 73 aa1.89□□□□□ -2.11
MATR3-202ENST00000502422 TNP1P09430 55 aa1.87□□□□□ -2.11
MATR3-202ENST00000502422 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
MATR3-202ENST00000502422 KRTAP8-1Q8IUC2 63 aa1.87□□□□□ -2.11
MATR3-202ENST00000502422 DSTQ03001 7570 aaKnown RBP1.84□□□□□ -2.11
MATR3-202ENST00000502422 KRTAP9-6A8MVA2 160 aa1.84□□□□□ -2.12
MATR3-202ENST00000502422 LCE3EQ5T5B0 92 aa1.81□□□□□ -2.12
MATR3-202ENST00000502422 OBSCNQ5VST9 7968 aa1.81□□□□□ -2.12
MATR3-202ENST00000502422 MT1XP80297 61 aa1.77□□□□□ -2.13
MATR3-202ENST00000502422 AHNAK2Q8IVF2 5795 aa1.76□□□□□ -2.13
MATR3-202ENST00000502422 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
MATR3-202ENST00000502422 LCE3AQ5TA76 89 aa1.74□□□□□ -2.13
MATR3-202ENST00000502422 MT4P47944 62 aa1.68□□□□□ -2.14
MATR3-202ENST00000502422 KRTAP12-3P60328 96 aa1.63□□□□□ -2.15
MATR3-202ENST00000502422 KRTAP5-5Q701N2 237 aaPredicted RBP1.63□□□□□ -2.15
MATR3-202ENST00000502422 KRTAP19-3Q7Z4W3 81 aa1.63□□□□□ -2.15
MATR3-202ENST00000502422 MT1EP04732 61 aa1.58□□□□□ -2.16
MATR3-202ENST00000502422 MT1GP13640 62 aa1.58□□□□□ -2.16
MATR3-202ENST00000502422 KRTAP19-7Q3SYF9 63 aa1.58□□□□□ -2.16
MATR3-202ENST00000502422 MT1MQ8N339 61 aa1.52□□□□□ -2.17
MATR3-202ENST00000502422 LCE3DQ9BYE3 92 aa1.52□□□□□ -2.17
MATR3-202ENST00000502422 MUC5ACP98088 5654 aa1.52□□□□□ -2.17
MATR3-202ENST00000502422 KRTAP19-5Q3LI72 72 aa1.51□□□□□ -2.17
MATR3-202ENST00000502422 KRTAP20-2Q3LI61 65 aa1.5□□□□□ -2.17
MATR3-202ENST00000502422 MT1LQ93083 61 aa1.48□□□□□ -2.17
MATR3-202ENST00000502422 KRTAP12-4P60329 112 aa1.47□□□□□ -2.17
MATR3-202ENST00000502422 LCE1CQ5T751 118 aa1.46□□□□□ -2.18
MATR3-202ENST00000502422 LCE1BQ5T7P3 118 aa1.46□□□□□ -2.18
MATR3-202ENST00000502422 SYNE1Q8NF91 8797 aaKnown RBP1.43□□□□□ -2.18
MATR3-202ENST00000502422 PRM1P04553 51 aa1.29□□□□□ -2.2
MATR3-202ENST00000502422 KRTAP6-1Q3LI64 71 aa1.27□□□□□ -2.21
MATR3-202ENST00000502422 MT1AP04731 61 aa1.26□□□□□ -2.21
MATR3-202ENST00000502422 KRTAP6-2Q3LI66 62 aa1.26□□□□□ -2.21
MATR3-202ENST00000502422 MUC19Q7Z5P9 8384 aa1.12□□□□□ -2.23
MATR3-202ENST00000502422 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
MATR3-202ENST00000502422 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.25
MATR3-202ENST00000502422 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
MATR3-202ENST00000502422 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 266.6 ms