RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 CLPSL2Q6UWE3 100 aa0.51□□□□□ -2.33
NCL-210ENST00000494618 WFDC10BQ8IUB3 73 aa0.51□□□□□ -2.33
NCL-210ENST00000494618 LEAP2Q969E1 77 aa0.51□□□□□ -2.33
NCL-210ENST00000494618 TOMM7Q9P0U1 55 aa0.51□□□□□ -2.33
NCL-210ENST00000494618 DNAH2Q9P225 4427 aa0.5□□□□□ -2.33
NCL-210ENST00000494618 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
NCL-210ENST00000494618 Q5VSD8 79 aa0.5□□□□□ -2.33
NCL-210ENST00000494618 NOP10Q9NPE3 64 aaKnown RBP0.5□□□□□ -2.33
NCL-210ENST00000494618 Q9Y3F1 56 aa0.5□□□□□ -2.33
NCL-210ENST00000494618 DNAH8Q96JB1 4490 aa0.5□□□□□ -2.33
NCL-210ENST00000494618 TNXBP22105 4242 aa0.49□□□□□ -2.33
NCL-210ENST00000494618 DNAH17Q9UFH2 4485 aa0.48□□□□□ -2.33
NCL-210ENST00000494618 DEFB130BP0DP73 79 aa0.48□□□□□ -2.33
NCL-210ENST00000494618 DEFB130AP0DP74 79 aa0.48□□□□□ -2.33
NCL-210ENST00000494618 KRTAP19-6Q3LI70 58 aa0.48□□□□□ -2.33
NCL-210ENST00000494618 LPAP08519 4548 aa0.48□□□□□ -2.33
NCL-210ENST00000494618 STATHP02808 62 aa0.47□□□□□ -2.33
NCL-210ENST00000494618 SMR3BP02814 79 aaPredicted RBP0.47□□□□□ -2.33
NCL-210ENST00000494618 RHPN1-AS1Q9BWJ2 59 aa0.47□□□□□ -2.33
NCL-210ENST00000494618 H3BNG1 76 aa0.46□□□□□ -2.34
NCL-210ENST00000494618 M0QZ58 72 aa0.46□□□□□ -2.34
NCL-210ENST00000494618 SPRR2EP22531 72 aa0.46□□□□□ -2.34
NCL-210ENST00000494618 SPRR2BP35325 72 aa0.46□□□□□ -2.34
NCL-210ENST00000494618 SPRR2AP35326 72 aa0.46□□□□□ -2.34
NCL-210ENST00000494618 DEFB105AQ8NG35 78 aa0.46□□□□□ -2.34
NCL-210ENST00000494618 PRO0255Q9UI72 69 aa0.46□□□□□ -2.34
NCL-210ENST00000494618 S4R3F8 94 aa0.46□□□□□ -2.34
NCL-210ENST00000494618 APELAP0DMC3 54 aa0.45□□□□□ -2.34
NCL-210ENST00000494618 SPRR2DP22532 72 aa0.45□□□□□ -2.34
NCL-210ENST00000494618 PRLHP81277 87 aa0.45□□□□□ -2.34
NCL-210ENST00000494618 DEFB110Q30KQ9 67 aa0.45□□□□□ -2.34
NCL-210ENST00000494618 DEFB104AQ8WTQ1 72 aa0.45□□□□□ -2.34
NCL-210ENST00000494618 MT4P47944 62 aa0.44□□□□□ -2.34
NCL-210ENST00000494618 APLNQ9ULZ1 77 aa0.44□□□□□ -2.34
NCL-210ENST00000494618 MUC17Q685J3 4493 aa0.44□□□□□ -2.34
NCL-210ENST00000494618 CD52P31358 61 aa0.43□□□□□ -2.34
NCL-210ENST00000494618 RPS29P62273 56 aaKnown RBP0.43□□□□□ -2.34
NCL-210ENST00000494618 LINC01556Q5JQF7 62 aa0.43□□□□□ -2.34
NCL-210ENST00000494618 SPINK6Q6UWN8 80 aa0.43□□□□□ -2.34
NCL-210ENST00000494618 DEFB108BQ8NET1 73 aa0.43□□□□□ -2.34
NCL-210ENST00000494618 SPINK1P00995 79 aa0.42□□□□□ -2.34
NCL-210ENST00000494618 HTN1P15515 57 aa0.42□□□□□ -2.34
NCL-210ENST00000494618 DEFB1P60022 68 aa0.42□□□□□ -2.34
NCL-210ENST00000494618 C9orf92A6NGG3 77 aa0.41□□□□□ -2.34
NCL-210ENST00000494618 A0A096LPF7 62 aa0.4□□□□□ -2.35
NCL-210ENST00000494618 TNP1P09430 55 aa0.4□□□□□ -2.35
NCL-210ENST00000494618 SPART-AS1P0CW21 52 aa0.39□□□□□ -2.35
NCL-210ENST00000494618 DEFB136Q30KP8 78 aa0.39□□□□□ -2.35
NCL-210ENST00000494618 DEFB133Q30KQ1 61 aa0.39□□□□□ -2.35
NCL-210ENST00000494618 A0A096LNI7 61 aa0.38□□□□□ -2.35
NCL-210ENST00000494618 DEFB135Q30KP9 77 aa0.38□□□□□ -2.35
NCL-210ENST00000494618 U3KQA8 63 aa0.38□□□□□ -2.35
NCL-210ENST00000494618 SPRR2FQ96RM1 72 aa0.37□□□□□ -2.35
NCL-210ENST00000494618 M0R2T5 61 aa0.36□□□□□ -2.35
NCL-210ENST00000494618 KRTAP8-1Q8IUC2 63 aa0.35□□□□□ -2.35
NCL-210ENST00000494618 MT1HP80294 61 aa0.33□□□□□ -2.36
NCL-210ENST00000494618 MT1HL1P0DM35 61 aa0.32□□□□□ -2.36
NCL-210ENST00000494618 HTN3P15516 51 aa0.32□□□□□ -2.36
NCL-210ENST00000494618 SYNE1Q8NF91 8797 aaKnown RBP0.32□□□□□ -2.36
NCL-210ENST00000494618 DEFB4AO15263 64 aa0.3□□□□□ -2.36
NCL-210ENST00000494618 MT1AP04731 61 aa0.3□□□□□ -2.36
NCL-210ENST00000494618 KRTAP19-5Q3LI72 72 aa0.29□□□□□ -2.36
NCL-210ENST00000494618 PRM1P04553 51 aa0.28□□□□□ -2.36
NCL-210ENST00000494618 SPRR2GQ9BYE4 73 aa0.28□□□□□ -2.36
NCL-210ENST00000494618 MT1EP04732 61 aa0.27□□□□□ -2.37
NCL-210ENST00000494618 KRTAP20-2Q3LI61 65 aa0.27□□□□□ -2.37
NCL-210ENST00000494618 MT1LQ93083 61 aa0.25□□□□□ -2.37
NCL-210ENST00000494618 KRTAP19-8Q3LI54 63 aa0.24□□□□□ -2.37
NCL-210ENST00000494618 KRTAP6-2Q3LI66 62 aa0.23□□□□□ -2.37
NCL-210ENST00000494618 MT1XP80297 61 aa0.22□□□□□ -2.37
NCL-210ENST00000494618 KRTAP19-2Q3LHN2 52 aa0.22□□□□□ -2.37
NCL-210ENST00000494618 MT1FP04733 61 aa0.21□□□□□ -2.38
NCL-210ENST00000494618 MT2AP02795 61 aa0.2□□□□□ -2.38
NCL-210ENST00000494618 MT1GP13640 62 aa0.19□□□□□ -2.38
NCL-210ENST00000494618 KRTAP19-7Q3SYF9 63 aa0.19□□□□□ -2.38
NCL-210ENST00000494618 MT1MQ8N339 61 aa0.19□□□□□ -2.38
NCL-210ENST00000494618 MT1BP07438 61 aa0.18□□□□□ -2.38
NCL-210ENST00000494618 KRTAP6-1Q3LI64 71 aa0.15□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 7.9 ms