RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 MDN1Q9NU22 5596 aa0.53□□□□□ -2.32
PRPF4-203ENST00000488937 SMIM2Q9BVW6 85 aa0.52□□□□□ -2.33
PRPF4-203ENST00000488937 DEFB110Q30KQ9 67 aa0.51□□□□□ -2.33
PRPF4-203ENST00000488937 TTTY10Q9BZA0 68 aa0.51□□□□□ -2.33
PRPF4-203ENST00000488937 KAAG1Q9UBP8 84 aa0.51□□□□□ -2.33
PRPF4-203ENST00000488937 LPAP08519 4548 aa0.51□□□□□ -2.33
PRPF4-203ENST00000488937 MUC12Q9UKN1 5478 aa0.5□□□□□ -2.33
PRPF4-203ENST00000488937 H3BSH0 61 aa0.5□□□□□ -2.33
PRPF4-203ENST00000488937 MUC5ACP98088 5654 aa0.48□□□□□ -2.33
PRPF4-203ENST00000488937 H3BUX3 64 aa0.48□□□□□ -2.33
PRPF4-203ENST00000488937 KRTAP19-6Q3LI70 58 aa0.48□□□□□ -2.33
PRPF4-203ENST00000488937 SPRR2DP22532 72 aa0.47□□□□□ -2.33
PRPF4-203ENST00000488937 DNAH8Q96JB1 4490 aa0.46□□□□□ -2.34
PRPF4-203ENST00000488937 IGLV5-48A0A075B6I7 105 aa0.46□□□□□ -2.34
PRPF4-203ENST00000488937 H3BNG1 76 aa0.46□□□□□ -2.34
PRPF4-203ENST00000488937 SMR3BP02814 79 aaPredicted RBP0.46□□□□□ -2.34
PRPF4-203ENST00000488937 WFDC10BQ8IUB3 73 aa0.46□□□□□ -2.34
PRPF4-203ENST00000488937 NDUFA1O15239 70 aa0.45□□□□□ -2.34
PRPF4-203ENST00000488937 MT1HP80294 61 aa0.45□□□□□ -2.34
PRPF4-203ENST00000488937 KRTAP19-2Q3LHN2 52 aa0.45□□□□□ -2.34
PRPF4-203ENST00000488937 MUC17Q685J3 4493 aa0.44□□□□□ -2.34
PRPF4-203ENST00000488937 SNRPGP62308 76 aaKnown RBP0.44□□□□□ -2.34
PRPF4-203ENST00000488937 LINC01590Q5TEZ4 76 aa0.44□□□□□ -2.34
PRPF4-203ENST00000488937 SPART-AS1P0CW21 52 aa0.43□□□□□ -2.34
PRPF4-203ENST00000488937 DEFB1P60022 68 aa0.43□□□□□ -2.34
PRPF4-203ENST00000488937 DEFB136Q30KP8 78 aa0.43□□□□□ -2.34
PRPF4-203ENST00000488937 MMP24-AS1A0A0U1RRL7 71 aa0.42□□□□□ -2.34
PRPF4-203ENST00000488937 NOP10Q9NPE3 64 aaKnown RBP0.42□□□□□ -2.34
PRPF4-203ENST00000488937 FLGP20930 4061 aaPredicted RBP0.41□□□□□ -2.34
PRPF4-203ENST00000488937 DEFB131AP59861 70 aa0.41□□□□□ -2.34
PRPF4-203ENST00000488937 ARHGAP5-AS1Q96IT6 56 aa0.41□□□□□ -2.34
PRPF4-203ENST00000488937 SPRR2BP35325 72 aa0.4□□□□□ -2.35
PRPF4-203ENST00000488937 LEAP2Q969E1 77 aa0.4□□□□□ -2.35
PRPF4-203ENST00000488937 C9orf92A6NGG3 77 aa0.39□□□□□ -2.35
PRPF4-203ENST00000488937 A8MTW9 85 aa0.39□□□□□ -2.35
PRPF4-203ENST00000488937 APELAP0DMC3 54 aa0.39□□□□□ -2.35
PRPF4-203ENST00000488937 LINC01556Q5JQF7 62 aa0.39□□□□□ -2.35
PRPF4-203ENST00000488937 DEFB4AO15263 64 aa0.38□□□□□ -2.35
PRPF4-203ENST00000488937 MT2AP02795 61 aa0.38□□□□□ -2.35
PRPF4-203ENST00000488937 SPRR2EP22531 72 aa0.38□□□□□ -2.35
PRPF4-203ENST00000488937 SPRR2AP35326 72 aa0.38□□□□□ -2.35
PRPF4-203ENST00000488937 RPL39P5Q59GN2 51 aa0.38□□□□□ -2.35
PRPF4-203ENST00000488937 RPL39LQ96EH5 51 aaKnown RBP0.38□□□□□ -2.35
PRPF4-203ENST00000488937 A0A096LPF7 62 aa0.37□□□□□ -2.35
PRPF4-203ENST00000488937 RPS29P62273 56 aaKnown RBP0.37□□□□□ -2.35
PRPF4-203ENST00000488937 RPL39P62891 51 aaKnown RBP0.37□□□□□ -2.35
PRPF4-203ENST00000488937 PRCDQ00LT1 54 aa0.37□□□□□ -2.35
PRPF4-203ENST00000488937 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
PRPF4-203ENST00000488937 MT1FP04733 61 aa0.36□□□□□ -2.35
PRPF4-203ENST00000488937 K7EIM0 57 aa0.35□□□□□ -2.35
PRPF4-203ENST00000488937 SPRR2FQ96RM1 72 aa0.35□□□□□ -2.35
PRPF4-203ENST00000488937 RHPN1-AS1Q9BWJ2 59 aa0.35□□□□□ -2.35
PRPF4-203ENST00000488937 HTN3P15516 51 aa0.34□□□□□ -2.36
PRPF4-203ENST00000488937 POLR2KP53803 58 aaKnown RBP0.34□□□□□ -2.36
PRPF4-203ENST00000488937 TMEM167AQ8TBQ9 72 aa0.34□□□□□ -2.36
PRPF4-203ENST00000488937 TOMM7Q9P0U1 55 aa0.34□□□□□ -2.36
PRPF4-203ENST00000488937 M0QY20 66 aa0.33□□□□□ -2.36
PRPF4-203ENST00000488937 KRTAP19-8Q3LI54 63 aa0.33□□□□□ -2.36
PRPF4-203ENST00000488937 CLPSL2Q6UWE3 100 aa0.32□□□□□ -2.36
PRPF4-203ENST00000488937 KRTAP8-1Q8IUC2 63 aa0.32□□□□□ -2.36
PRPF4-203ENST00000488937 MT1BP07438 61 aa0.31□□□□□ -2.36
PRPF4-203ENST00000488937 MT4P47944 62 aa0.31□□□□□ -2.36
PRPF4-203ENST00000488937 KRTAP20-2Q3LI61 65 aa0.31□□□□□ -2.36
PRPF4-203ENST00000488937 SPRR2GQ9BYE4 73 aa0.31□□□□□ -2.36
PRPF4-203ENST00000488937 M0QZ58 72 aa0.3□□□□□ -2.36
PRPF4-203ENST00000488937 KRTAP6-2Q3LI66 62 aa0.3□□□□□ -2.36
PRPF4-203ENST00000488937 A0A096LNI7 61 aa0.29□□□□□ -2.36
PRPF4-203ENST00000488937 MT1GP13640 62 aa0.28□□□□□ -2.36
PRPF4-203ENST00000488937 MT1AP04731 61 aa0.27□□□□□ -2.37
PRPF4-203ENST00000488937 TNP1P09430 55 aa0.27□□□□□ -2.37
PRPF4-203ENST00000488937 HTN1P15515 57 aa0.27□□□□□ -2.37
PRPF4-203ENST00000488937 MT1XP80297 61 aa0.25□□□□□ -2.37
PRPF4-203ENST00000488937 MT1MQ8N339 61 aa0.25□□□□□ -2.37
PRPF4-203ENST00000488937 MT1EP04732 61 aa0.24□□□□□ -2.37
PRPF4-203ENST00000488937 KRTAP19-7Q3SYF9 63 aa0.24□□□□□ -2.37
PRPF4-203ENST00000488937 KRTAP19-5Q3LI72 72 aa0.2□□□□□ -2.38
PRPF4-203ENST00000488937 MT1LQ93083 61 aa0.2□□□□□ -2.38
PRPF4-203ENST00000488937 KRTAP6-1Q3LI64 71 aa0.17□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 175.1 ms