RNA–Protein interactions for RNA: ENST00000475427.2

PDE6C-202, Transcript of phosphodiesterase 6C, humanhuman

TSL 2

Gene PDE6C, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-202ENST00000475427 AGLP35573 1532 aa-2.62□□□□□ -2.83
PDE6C-202ENST00000475427 H0YGX0 51 aa-2.62□□□□□ -2.83
PDE6C-202ENST00000475427 M0R143 59 aa-2.62□□□□□ -2.83
PDE6C-202ENST00000475427 NFAT5O94916 1531 aa-2.63□□□□□ -2.83
PDE6C-202ENST00000475427 DUOX2Q9NRD8 1548 aa-2.63□□□□□ -2.83
PDE6C-202ENST00000475427 EFCAB10A6NFE3 127 aa-2.63□□□□□ -2.83
PDE6C-202ENST00000475427 LINC01549A6NIU2 74 aa-2.63□□□□□ -2.83
PDE6C-202ENST00000475427 DEFB124Q8NES8 71 aa-2.63□□□□□ -2.83
PDE6C-202ENST00000475427 Q9H521 79 aa-2.63□□□□□ -2.83
PDE6C-202ENST00000475427 ST20Q9HBF5 79 aa-2.63□□□□□ -2.83
PDE6C-202ENST00000475427 CFAP74Q9C0B2 1584 aa-2.64□□□□□ -2.83
PDE6C-202ENST00000475427 UGGT1Q9NYU2 1555 aa-2.64□□□□□ -2.83
PDE6C-202ENST00000475427 ATP6V1G2-DDX39BF2Z307 99 aa-2.64□□□□□ -2.83
PDE6C-202ENST00000475427 ADIRFQ15847 76 aa-2.64□□□□□ -2.83
PDE6C-202ENST00000475427 TOMM7Q9P0U1 55 aa-2.64□□□□□ -2.83
PDE6C-202ENST00000475427 GNG13Q9P2W3 67 aa-2.64□□□□□ -2.83
PDE6C-202ENST00000475427 HILPDAQ9Y5L2 63 aa-2.64□□□□□ -2.83
PDE6C-202ENST00000475427 DEFB104AQ8WTQ1 72 aa-2.65□□□□□ -2.83
PDE6C-202ENST00000475427 ABCA6Q8N139 1617 aa-2.65□□□□□ -2.83
PDE6C-202ENST00000475427 CLTCL1P53675 1640 aa-2.66□□□□□ -2.84
PDE6C-202ENST00000475427 C18orf32Q8TCD1 76 aa-2.66□□□□□ -2.84
PDE6C-202ENST00000475427 LINC01556Q5JQF7 62 aa-2.68□□□□□ -2.84
PDE6C-202ENST00000475427 TRPM2O94759 1503 aa-2.68□□□□□ -2.84
PDE6C-202ENST00000475427 ABCA9Q8IUA7 1624 aa-2.69□□□□□ -2.84
PDE6C-202ENST00000475427 DCAF1Q9Y4B6 1507 aa-2.69□□□□□ -2.84
PDE6C-202ENST00000475427 PKIAP61925 76 aa-2.7□□□□□ -2.84
PDE6C-202ENST00000475427 GOLGB1Q14789 3259 aaKnown RBP-2.7□□□□□ -2.84
PDE6C-202ENST00000475427 V9GYS6 101 aa-2.71□□□□□ -2.84
PDE6C-202ENST00000475427 ADCY10Q96PN6 1610 aa-2.71□□□□□ -2.84
PDE6C-202ENST00000475427 PDCD5O14737 125 aa-2.72□□□□□ -2.84
PDE6C-202ENST00000475427 PRXQ9BXM0 1461 aa-2.72□□□□□ -2.85
PDE6C-202ENST00000475427 PLNP26678 52 aa-2.73□□□□□ -2.85
PDE6C-202ENST00000475427 S100A13Q99584 98 aa-2.73□□□□□ -2.85
PDE6C-202ENST00000475427 ABCA5Q8WWZ7 1642 aa-2.78□□□□□ -2.85
PDE6C-202ENST00000475427 NDUFA1O15239 70 aa-2.8□□□□□ -2.86
PDE6C-202ENST00000475427 CPS1P31327 1500 aa-2.8□□□□□ -2.86
PDE6C-202ENST00000475427 DUOX1Q9NRD9 1551 aa-2.81□□□□□ -2.86
PDE6C-202ENST00000475427 IQGAP1P46940 1657 aa-2.82□□□□□ -2.86
PDE6C-202ENST00000475427 IQGAP3Q86VI3 1631 aa-2.83□□□□□ -2.86
PDE6C-202ENST00000475427 TOP2AP11388 1531 aaKnown RBP-2.87□□□□□ -2.87
PDE6C-202ENST00000475427 ERICH3Q5RHP9 1530 aa-2.89□□□□□ -2.87
PDE6C-202ENST00000475427 UGGT2Q9NYU1 1516 aa-2.89□□□□□ -2.87
PDE6C-202ENST00000475427 ABCA10Q8WWZ4 1543 aa-2.93□□□□□ -2.88
PDE6C-202ENST00000475427 H3BUX3 64 aa-2.93□□□□□ -2.88
PDE6C-202ENST00000475427 RPL39P62891 51 aaKnown RBP-2.93□□□□□ -2.88
PDE6C-202ENST00000475427 APELAP0DMC3 54 aa-2.94□□□□□ -2.88
PDE6C-202ENST00000475427 SMCO4Q9NRQ5 59 aa-2.95□□□□□ -2.88
PDE6C-202ENST00000475427 SAMD9LQ8IVG5 1584 aa-2.96□□□□□ -2.88
PDE6C-202ENST00000475427 ATP7AQ04656 1500 aa-2.97□□□□□ -2.88
PDE6C-202ENST00000475427 FANCD2Q9BXW9 1451 aa-2.97□□□□□ -2.89
PDE6C-202ENST00000475427 CCDC18Q5T9S5 1454 aa-2.98□□□□□ -2.89
PDE6C-202ENST00000475427 A0A096LPF7 62 aa-2.99□□□□□ -2.89
PDE6C-202ENST00000475427 ABCC8Q09428 1581 aa-3□□□□□ -2.89
PDE6C-202ENST00000475427 A0A087WWC5 75 aa-3□□□□□ -2.89
PDE6C-202ENST00000475427 EFCAB5A4FU69 1503 aa-3.01□□□□□ -2.89
PDE6C-202ENST00000475427 RPL39LQ96EH5 51 aaKnown RBP-3.01□□□□□ -2.89
PDE6C-202ENST00000475427 CMC2Q9NRP2 79 aa-3.02□□□□□ -2.89
PDE6C-202ENST00000475427 HTN3P15516 51 aa-3.05□□□□□ -2.9
PDE6C-202ENST00000475427 MROH2BQ7Z745 1585 aa-3.06□□□□□ -2.9
PDE6C-202ENST00000475427 GNG2P59768 71 aa-3.09□□□□□ -2.9
PDE6C-202ENST00000475427 SMIM5Q71RC9 77 aa-3.1□□□□□ -2.91
PDE6C-202ENST00000475427 K7EIM0 57 aa-3.18□□□□□ -2.92
PDE6C-202ENST00000475427 PRCDQ00LT1 54 aa-3.19□□□□□ -2.92
PDE6C-202ENST00000475427 TMEM167AQ8TBQ9 72 aa-3.22□□□□□ -2.92
PDE6C-202ENST00000475427 H3BSH0 61 aa-3.24□□□□□ -2.93
PDE6C-202ENST00000475427 ARHGAP5-AS1Q96IT6 56 aa-3.27□□□□□ -2.93
PDE6C-202ENST00000475427 Q9Y3F1 56 aa-3.31□□□□□ -2.94
PDE6C-202ENST00000475427 SNRPGP15A8MWD9 76 aa-3.33□□□□□ -2.94
PDE6C-202ENST00000475427 IQGAP2Q13576 1575 aa-3.37□□□□□ -2.95
PDE6C-202ENST00000475427 COX14Q96I36 57 aa-3.43□□□□□ -2.96
PDE6C-202ENST00000475427 RPL39P5Q59GN2 51 aa-3.51□□□□□ -2.97
PDE6C-202ENST00000475427 DEFB108AA8MXU0 73 aa-3.53□□□□□ -2.97
PDE6C-202ENST00000475427 SNRPGP62308 76 aaKnown RBP-3.53□□□□□ -2.97
PDE6C-202ENST00000475427 TOMM5Q8N4H5 51 aa-3.54□□□□□ -2.98
PDE6C-202ENST00000475427 DEFB108BQ8NET1 73 aa-3.58□□□□□ -2.98
PDE6C-202ENST00000475427 SMIM31A0A1B0GVY4 71 aa-3.59□□□□□ -2.98
PDE6C-202ENST00000475427 GCC2Q8IWJ2 1684 aa-3.64□□□□□ -2.99
PDE6C-202ENST00000475427 STATHP02808 62 aa-3.69□□□□□ -3
Retrieved 78 of 20,778 RNA–protein pairs in 51.2 ms