RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 FAT3Q8TDW7 4589 aa1.25□□□□□ -2.21
SDHB-204ENST00000475049 LRP1BQ9NZR2 4599 aa1.25□□□□□ -2.21
SDHB-204ENST00000475049 PRLHP81277 87 aa1.25□□□□□ -2.21
SDHB-204ENST00000475049 Q96NJ1 140 aa1.25□□□□□ -2.21
SDHB-204ENST00000475049 DEFB135Q30KP9 77 aa1.24□□□□□ -2.21
SDHB-204ENST00000475049 H1FX-AS1Q4G0G2 97 aa1.24□□□□□ -2.21
SDHB-204ENST00000475049 KRTAP2-1Q9BYU5 128 aa1.24□□□□□ -2.21
SDHB-204ENST00000475049 DNAH17Q9UFH2 4485 aa1.24□□□□□ -2.21
SDHB-204ENST00000475049 DNAH5Q8TE73 4624 aa1.23□□□□□ -2.21
SDHB-204ENST00000475049 A0A087WTM6 91 aa1.23□□□□□ -2.21
SDHB-204ENST00000475049 SMR3BP02814 79 aaPredicted RBP1.23□□□□□ -2.21
SDHB-204ENST00000475049 RPL37P61927 97 aaKnown RBP1.23□□□□□ -2.21
SDHB-204ENST00000475049 A0A096LNI7 61 aa1.22□□□□□ -2.21
SDHB-204ENST00000475049 H0YAA0 97 aa1.21□□□□□ -2.22
SDHB-204ENST00000475049 DEFB4AO15263 64 aa1.21□□□□□ -2.22
SDHB-204ENST00000475049 SPINK6Q6UWN8 80 aa1.21□□□□□ -2.22
SDHB-204ENST00000475049 AHNAK2Q8IVF2 5795 aa1.21□□□□□ -2.22
SDHB-204ENST00000475049 TNXBP22105 4242 aa1.21□□□□□ -2.22
SDHB-204ENST00000475049 NBDYA0A0U1RRE5 68 aa1.2□□□□□ -2.22
SDHB-204ENST00000475049 SPINK1P00995 79 aa1.2□□□□□ -2.22
SDHB-204ENST00000475049 MUC12Q9UKN1 5478 aa1.19□□□□□ -2.22
SDHB-204ENST00000475049 USH2AO75445 5202 aa1.19□□□□□ -2.22
SDHB-204ENST00000475049 KRTAP10-4P60372 401 aaPredicted RBP1.18□□□□□ -2.22
SDHB-204ENST00000475049 KRTAP5-10Q6L8G5 202 aa1.18□□□□□ -2.22
SDHB-204ENST00000475049 PLAC4Q8WY50 150 aa1.18□□□□□ -2.22
SDHB-204ENST00000475049 UBE2DNLQ8IWF7 75 aa1.17□□□□□ -2.22
SDHB-204ENST00000475049 RPS29P62273 56 aaKnown RBP1.16□□□□□ -2.22
SDHB-204ENST00000475049 MT1HL1P0DM35 61 aa1.15□□□□□ -2.23
SDHB-204ENST00000475049 APLNQ9ULZ1 77 aa1.15□□□□□ -2.23
SDHB-204ENST00000475049 LPAP08519 4548 aa1.15□□□□□ -2.23
SDHB-204ENST00000475049 M0QZ58 72 aa1.14□□□□□ -2.23
SDHB-204ENST00000475049 INE1O15225 51 aa1.13□□□□□ -2.23
SDHB-204ENST00000475049 S4R3F8 94 aa1.13□□□□□ -2.23
SDHB-204ENST00000475049 A0A0D9SG42 100 aa1.11□□□□□ -2.23
SDHB-204ENST00000475049 C10orf95Q9H7T3 257 aa1.1□□□□□ -2.23
SDHB-204ENST00000475049 AHNAKQ09666 5890 aaKnown RBP1.1□□□□□ -2.23
SDHB-204ENST00000475049 MDN1Q9NU22 5596 aa1.09□□□□□ -2.23
SDHB-204ENST00000475049 DSTQ03001 7570 aaKnown RBP1.09□□□□□ -2.23
SDHB-204ENST00000475049 MUC5BQ9HC84 5762 aaPredicted RBP1.07□□□□□ -2.24
SDHB-204ENST00000475049 SPRR2EP22531 72 aa1.05□□□□□ -2.24
SDHB-204ENST00000475049 SPRR2BP35325 72 aa1.05□□□□□ -2.24
SDHB-204ENST00000475049 SPRR2AP35326 72 aa1.05□□□□□ -2.24
SDHB-204ENST00000475049 KRTAP19-6Q3LI70 58 aa1.05□□□□□ -2.24
SDHB-204ENST00000475049 C9orf92A6NGG3 77 aa1.03□□□□□ -2.24
SDHB-204ENST00000475049 M0R2T5 61 aa1.03□□□□□ -2.24
SDHB-204ENST00000475049 MT1HP80294 61 aa1.03□□□□□ -2.24
SDHB-204ENST00000475049 TNP1P09430 55 aa1.02□□□□□ -2.25
SDHB-204ENST00000475049 SPRR2DP22532 72 aa1.02□□□□□ -2.25
SDHB-204ENST00000475049 MUC5ACP98088 5654 aa1.01□□□□□ -2.25
SDHB-204ENST00000475049 DNAH8Q96JB1 4490 aa1.01□□□□□ -2.25
SDHB-204ENST00000475049 MUC17Q685J3 4493 aa1□□□□□ -2.25
SDHB-204ENST00000475049 MT4P47944 62 aa0.93□□□□□ -2.26
SDHB-204ENST00000475049 SPRR2FQ96RM1 72 aa0.93□□□□□ -2.26
SDHB-204ENST00000475049 FLGP20930 4061 aaPredicted RBP0.92□□□□□ -2.26
SDHB-204ENST00000475049 KRTAP19-2Q3LHN2 52 aa0.91□□□□□ -2.26
SDHB-204ENST00000475049 KRTAP8-1Q8IUC2 63 aa0.87□□□□□ -2.27
SDHB-204ENST00000475049 MT2AP02795 61 aa0.82□□□□□ -2.28
SDHB-204ENST00000475049 MT1FP04733 61 aa0.82□□□□□ -2.28
SDHB-204ENST00000475049 SPRR2GQ9BYE4 73 aa0.81□□□□□ -2.28
SDHB-204ENST00000475049 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
SDHB-204ENST00000475049 KRTAP19-8Q3LI54 63 aa0.75□□□□□ -2.29
SDHB-204ENST00000475049 PHGR1C9JFL3 82 aa0.73□□□□□ -2.29
SDHB-204ENST00000475049 KRTAP20-2Q3LI61 65 aa0.72□□□□□ -2.29
SDHB-204ENST00000475049 MT1XP80297 61 aa0.71□□□□□ -2.3
SDHB-204ENST00000475049 MT1EP04732 61 aa0.7□□□□□ -2.3
SDHB-204ENST00000475049 KRTAP19-5Q3LI72 72 aa0.7□□□□□ -2.3
SDHB-204ENST00000475049 MT1AP04731 61 aa0.69□□□□□ -2.3
SDHB-204ENST00000475049 KRTAP19-3Q7Z4W3 81 aa0.69□□□□□ -2.3
SDHB-204ENST00000475049 MT1BP07438 61 aa0.68□□□□□ -2.3
SDHB-204ENST00000475049 MT1LQ93083 61 aa0.68□□□□□ -2.3
SDHB-204ENST00000475049 PRM1P04553 51 aa0.64□□□□□ -2.31
SDHB-204ENST00000475049 MT1GP13640 62 aa0.62□□□□□ -2.31
SDHB-204ENST00000475049 KRTAP19-7Q3SYF9 63 aa0.62□□□□□ -2.31
SDHB-204ENST00000475049 SYNE1Q8NF91 8797 aaKnown RBP0.61□□□□□ -2.31
SDHB-204ENST00000475049 MT1MQ8N339 61 aa0.58□□□□□ -2.32
SDHB-204ENST00000475049 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
SDHB-204ENST00000475049 KRTAP6-2Q3LI66 62 aa0.57□□□□□ -2.32
SDHB-204ENST00000475049 KRTAP6-1Q3LI64 71 aa0.51□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 85 ms