RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 C10orf99Q6UWK7 81 aa1.55□□□□□ -2.16
LINC01004-201ENST00000445184 MUC12Q9UKN1 5478 aa1.55□□□□□ -2.16
LINC01004-201ENST00000445184 KMT2DO14686 5537 aa1.54□□□□□ -2.16
LINC01004-201ENST00000445184 A0A096LPF7 62 aa1.54□□□□□ -2.16
LINC01004-201ENST00000445184 H1FX-AS1Q4G0G2 97 aa1.53□□□□□ -2.16
LINC01004-201ENST00000445184 LINC01556Q5JQF7 62 aa1.53□□□□□ -2.16
LINC01004-201ENST00000445184 SMR3BP02814 79 aaPredicted RBP1.52□□□□□ -2.17
LINC01004-201ENST00000445184 SPART-AS1P0CW21 52 aa1.52□□□□□ -2.17
LINC01004-201ENST00000445184 CRIPTQ9P021 101 aa1.52□□□□□ -2.17
LINC01004-201ENST00000445184 LPAP08519 4548 aa1.5□□□□□ -2.17
LINC01004-201ENST00000445184 RPL37P61927 97 aaKnown RBP1.5□□□□□ -2.17
LINC01004-201ENST00000445184 PRLHP81277 87 aa1.5□□□□□ -2.17
LINC01004-201ENST00000445184 DNAH8Q96JB1 4490 aa1.49□□□□□ -2.17
LINC01004-201ENST00000445184 AHNAK2Q8IVF2 5795 aa1.49□□□□□ -2.17
LINC01004-201ENST00000445184 PLAC4Q8WY50 150 aa1.48□□□□□ -2.17
LINC01004-201ENST00000445184 MDN1Q9NU22 5596 aa1.48□□□□□ -2.17
LINC01004-201ENST00000445184 UBE2DNLQ8IWF7 75 aa1.47□□□□□ -2.17
LINC01004-201ENST00000445184 APLNQ9ULZ1 77 aa1.46□□□□□ -2.18
LINC01004-201ENST00000445184 A0A096LNI7 61 aa1.45□□□□□ -2.18
LINC01004-201ENST00000445184 SPINK1P00995 79 aa1.44□□□□□ -2.18
LINC01004-201ENST00000445184 HTN3P15516 51 aa1.44□□□□□ -2.18
LINC01004-201ENST00000445184 DEFB135Q30KP9 77 aa1.44□□□□□ -2.18
LINC01004-201ENST00000445184 INE1O15225 51 aa1.42□□□□□ -2.18
LINC01004-201ENST00000445184 DEFB4AO15263 64 aa1.42□□□□□ -2.18
LINC01004-201ENST00000445184 MT1HL1P0DM35 61 aa1.42□□□□□ -2.18
LINC01004-201ENST00000445184 C10orf95Q9H7T3 257 aa1.42□□□□□ -2.18
LINC01004-201ENST00000445184 KRTAP2-3P0C7H8 128 aa1.41□□□□□ -2.18
LINC01004-201ENST00000445184 SPINK6Q6UWN8 80 aa1.41□□□□□ -2.18
LINC01004-201ENST00000445184 KRTAP2-4Q9BYR9 128 aa1.41□□□□□ -2.18
LINC01004-201ENST00000445184 S4R3F8 94 aa1.41□□□□□ -2.18
LINC01004-201ENST00000445184 MUC17Q685J3 4493 aa1.38□□□□□ -2.19
LINC01004-201ENST00000445184 AHNAKQ09666 5890 aaKnown RBP1.37□□□□□ -2.19
LINC01004-201ENST00000445184 M0QZ58 72 aa1.37□□□□□ -2.19
LINC01004-201ENST00000445184 RPS29P62273 56 aaKnown RBP1.36□□□□□ -2.19
LINC01004-201ENST00000445184 DSTQ03001 7570 aaKnown RBP1.36□□□□□ -2.19
LINC01004-201ENST00000445184 A0A0D9SG42 100 aa1.34□□□□□ -2.19
LINC01004-201ENST00000445184 KRTAP10-4P60372 401 aaPredicted RBP1.34□□□□□ -2.19
LINC01004-201ENST00000445184 KRTAP2-1Q9BYU5 128 aa1.34□□□□□ -2.19
LINC01004-201ENST00000445184 M0R2T5 61 aa1.3□□□□□ -2.2
LINC01004-201ENST00000445184 MUC5BQ9HC84 5762 aaPredicted RBP1.28□□□□□ -2.2
LINC01004-201ENST00000445184 MT1HP80294 61 aa1.27□□□□□ -2.21
LINC01004-201ENST00000445184 KRTAP19-6Q3LI70 58 aa1.24□□□□□ -2.21
LINC01004-201ENST00000445184 FLGP20930 4061 aaPredicted RBP1.24□□□□□ -2.21
LINC01004-201ENST00000445184 KRTAP5-10Q6L8G5 202 aa1.22□□□□□ -2.21
LINC01004-201ENST00000445184 MUC5ACP98088 5654 aa1.22□□□□□ -2.21
LINC01004-201ENST00000445184 TNP1P09430 55 aa1.2□□□□□ -2.22
LINC01004-201ENST00000445184 C9orf92A6NGG3 77 aa1.19□□□□□ -2.22
LINC01004-201ENST00000445184 SPRR2EP22531 72 aa1.19□□□□□ -2.22
LINC01004-201ENST00000445184 SPRR2BP35325 72 aa1.19□□□□□ -2.22
LINC01004-201ENST00000445184 SPRR2AP35326 72 aa1.19□□□□□ -2.22
LINC01004-201ENST00000445184 SPRR2DP22532 72 aa1.17□□□□□ -2.22
LINC01004-201ENST00000445184 KRTAP19-2Q3LHN2 52 aa1.14□□□□□ -2.23
LINC01004-201ENST00000445184 SPRR2FQ96RM1 72 aa1.11□□□□□ -2.23
LINC01004-201ENST00000445184 KRTAP8-1Q8IUC2 63 aa1.09□□□□□ -2.23
LINC01004-201ENST00000445184 MT2AP02795 61 aa1.07□□□□□ -2.24
LINC01004-201ENST00000445184 MT1FP04733 61 aa1.05□□□□□ -2.24
LINC01004-201ENST00000445184 MT4P47944 62 aa1.03□□□□□ -2.24
LINC01004-201ENST00000445184 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
LINC01004-201ENST00000445184 SPRR2GQ9BYE4 73 aa0.99□□□□□ -2.25
LINC01004-201ENST00000445184 KRTAP19-5Q3LI72 72 aa0.92□□□□□ -2.26
LINC01004-201ENST00000445184 KRTAP19-8Q3LI54 63 aa0.91□□□□□ -2.26
LINC01004-201ENST00000445184 SYNE1Q8NF91 8797 aaKnown RBP0.9□□□□□ -2.27
LINC01004-201ENST00000445184 MT1XP80297 61 aa0.88□□□□□ -2.27
LINC01004-201ENST00000445184 MT1AP04731 61 aa0.85□□□□□ -2.27
LINC01004-201ENST00000445184 MT1EP04732 61 aa0.85□□□□□ -2.27
LINC01004-201ENST00000445184 KRTAP20-2Q3LI61 65 aa0.85□□□□□ -2.27
LINC01004-201ENST00000445184 MT1BP07438 61 aa0.83□□□□□ -2.28
LINC01004-201ENST00000445184 MT1LQ93083 61 aa0.83□□□□□ -2.28
LINC01004-201ENST00000445184 PRM1P04553 51 aa0.82□□□□□ -2.28
LINC01004-201ENST00000445184 KRTAP19-3Q7Z4W3 81 aa0.82□□□□□ -2.28
LINC01004-201ENST00000445184 KRTAP19-7Q3SYF9 63 aa0.78□□□□□ -2.28
LINC01004-201ENST00000445184 PHGR1C9JFL3 82 aa0.76□□□□□ -2.29
LINC01004-201ENST00000445184 KRTAP6-2Q3LI66 62 aa0.73□□□□□ -2.29
LINC01004-201ENST00000445184 MT1GP13640 62 aa0.72□□□□□ -2.29
LINC01004-201ENST00000445184 MT1MQ8N339 61 aa0.68□□□□□ -2.3
LINC01004-201ENST00000445184 KRTAP6-1Q3LI64 71 aa0.64□□□□□ -2.31
LINC01004-201ENST00000445184 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 17.5 ms