RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 M0R143 59 aa-0.45□□□□□ -2.48
TRAPPC13-203ENST00000415825 SMIM13P0DJ93 91 aa-0.45□□□□□ -2.48
TRAPPC13-203ENST00000415825 ATXN8Q156A1 80 aa-0.45□□□□□ -2.48
TRAPPC13-203ENST00000415825 DEFB133Q30KQ1 61 aa-0.45□□□□□ -2.48
TRAPPC13-203ENST00000415825 KRTAP19-2Q3LHN2 52 aa-0.45□□□□□ -2.48
TRAPPC13-203ENST00000415825 ENHOQ6UWT2 76 aa-0.45□□□□□ -2.48
TRAPPC13-203ENST00000415825 DEFB124Q8NES8 71 aa-0.45□□□□□ -2.48
TRAPPC13-203ENST00000415825 S100A16Q96FQ6 103 aaKnown RBP-0.45□□□□□ -2.48
TRAPPC13-203ENST00000415825 SNHG12Q9BXW3 62 aa-0.45□□□□□ -2.48
TRAPPC13-203ENST00000415825 TTTY10Q9BZA0 68 aa-0.45□□□□□ -2.48
TRAPPC13-203ENST00000415825 KAAG1Q9UBP8 84 aa-0.45□□□□□ -2.48
TRAPPC13-203ENST00000415825 DDX60Q8IY21 1712 aaKnown RBP-0.46□□□□□ -2.48
TRAPPC13-203ENST00000415825 LINC01549A6NIU2 74 aa-0.46□□□□□ -2.48
TRAPPC13-203ENST00000415825 H0YGX0 51 aa-0.46□□□□□ -2.48
TRAPPC13-203ENST00000415825 LINC01590Q5TEZ4 76 aa-0.46□□□□□ -2.48
TRAPPC13-203ENST00000415825 WFDC10BQ8IUB3 73 aa-0.46□□□□□ -2.48
TRAPPC13-203ENST00000415825 V9GYS6 101 aa-0.46□□□□□ -2.48
TRAPPC13-203ENST00000415825 FANCD2Q9BXW9 1451 aa-0.47□□□□□ -2.48
TRAPPC13-203ENST00000415825 MROH2BQ7Z745 1585 aa-0.47□□□□□ -2.48
TRAPPC13-203ENST00000415825 PLNP26678 52 aa-0.47□□□□□ -2.48
TRAPPC13-203ENST00000415825 ADIRFQ15847 76 aa-0.47□□□□□ -2.48
TRAPPC13-203ENST00000415825 TDRG1Q3Y452 100 aa-0.47□□□□□ -2.48
TRAPPC13-203ENST00000415825 LINC00308Q8TCZ7 52 aa-0.47□□□□□ -2.48
TRAPPC13-203ENST00000415825 S100A13Q99584 98 aa-0.47□□□□□ -2.48
TRAPPC13-203ENST00000415825 Q9H521 79 aa-0.47□□□□□ -2.48
TRAPPC13-203ENST00000415825 ST20Q9HBF5 79 aa-0.47□□□□□ -2.48
TRAPPC13-203ENST00000415825 TOP2AP11388 1531 aaKnown RBP-0.48□□□□□ -2.49
TRAPPC13-203ENST00000415825 CPS1P31327 1500 aa-0.48□□□□□ -2.49
TRAPPC13-203ENST00000415825 ATP7AQ04656 1500 aa-0.48□□□□□ -2.49
TRAPPC13-203ENST00000415825 ERICH3Q5RHP9 1530 aa-0.48□□□□□ -2.49
TRAPPC13-203ENST00000415825 IQGAP1P46940 1657 aa-0.48□□□□□ -2.49
TRAPPC13-203ENST00000415825 IGIPA6NJ69 53 aa-0.48□□□□□ -2.49
TRAPPC13-203ENST00000415825 PKIAP61925 76 aa-0.48□□□□□ -2.49
TRAPPC13-203ENST00000415825 SMIM2Q9BVW6 85 aa-0.48□□□□□ -2.49
TRAPPC13-203ENST00000415825 EFCAB5A4FU69 1503 aa-0.48□□□□□ -2.49
TRAPPC13-203ENST00000415825 M0R1W7 72 aa-0.49□□□□□ -2.49
TRAPPC13-203ENST00000415825 C18orf32Q8TCD1 76 aa-0.49□□□□□ -2.49
TRAPPC13-203ENST00000415825 DUOX1Q9NRD9 1551 aa-0.49□□□□□ -2.49
TRAPPC13-203ENST00000415825 H3BUT2 72 aa-0.5□□□□□ -2.49
TRAPPC13-203ENST00000415825 H3BUX3 64 aa-0.5□□□□□ -2.49
TRAPPC13-203ENST00000415825 H3BVH4 76 aa-0.5□□□□□ -2.49
TRAPPC13-203ENST00000415825 PDCD5O14737 125 aa-0.5□□□□□ -2.49
TRAPPC13-203ENST00000415825 HTN1P15515 57 aa-0.5□□□□□ -2.49
TRAPPC13-203ENST00000415825 DEFB104AQ8WTQ1 72 aa-0.5□□□□□ -2.49
TRAPPC13-203ENST00000415825 GNG13Q9P2W3 67 aa-0.5□□□□□ -2.49
TRAPPC13-203ENST00000415825 NDUFA1O15239 70 aa-0.51□□□□□ -2.49
TRAPPC13-203ENST00000415825 CMC2Q9NRP2 79 aa-0.52□□□□□ -2.49
TRAPPC13-203ENST00000415825 TOMM7Q9P0U1 55 aa-0.52□□□□□ -2.49
TRAPPC13-203ENST00000415825 A0A087WWC5 75 aa-0.53□□□□□ -2.49
TRAPPC13-203ENST00000415825 SMIM5Q71RC9 77 aa-0.54□□□□□ -2.5
TRAPPC13-203ENST00000415825 IQGAP2Q13576 1575 aa-0.54□□□□□ -2.5
TRAPPC13-203ENST00000415825 GNG2P59768 71 aa-0.55□□□□□ -2.5
TRAPPC13-203ENST00000415825 LINC01556Q5JQF7 62 aa-0.55□□□□□ -2.5
TRAPPC13-203ENST00000415825 SMCO4Q9NRQ5 59 aa-0.55□□□□□ -2.5
TRAPPC13-203ENST00000415825 Q9Y3F1 56 aa-0.55□□□□□ -2.5
TRAPPC13-203ENST00000415825 HILPDAQ9Y5L2 63 aa-0.55□□□□□ -2.5
TRAPPC13-203ENST00000415825 A0A096LNI7 61 aa-0.56□□□□□ -2.5
TRAPPC13-203ENST00000415825 TFF3Q07654 80 aa-0.57□□□□□ -2.5
TRAPPC13-203ENST00000415825 GCC2Q8IWJ2 1684 aa-0.59□□□□□ -2.5
TRAPPC13-203ENST00000415825 RPL39P62891 51 aaKnown RBP-0.59□□□□□ -2.5
TRAPPC13-203ENST00000415825 K7EIM0 57 aa-0.6□□□□□ -2.51
TRAPPC13-203ENST00000415825 PRCDQ00LT1 54 aa-0.6□□□□□ -2.51
TRAPPC13-203ENST00000415825 A0A096LPF7 62 aa-0.61□□□□□ -2.51
TRAPPC13-203ENST00000415825 TMEM167AQ8TBQ9 72 aa-0.62□□□□□ -2.51
TRAPPC13-203ENST00000415825 RPL39LQ96EH5 51 aaKnown RBP-0.62□□□□□ -2.51
TRAPPC13-203ENST00000415825 COX14Q96I36 57 aa-0.62□□□□□ -2.51
TRAPPC13-203ENST00000415825 SNRPGP15A8MWD9 76 aa-0.63□□□□□ -2.51
TRAPPC13-203ENST00000415825 ARHGAP5-AS1Q96IT6 56 aa-0.64□□□□□ -2.51
TRAPPC13-203ENST00000415825 APELAP0DMC3 54 aa-0.65□□□□□ -2.51
TRAPPC13-203ENST00000415825 HTN3P15516 51 aa-0.65□□□□□ -2.51
TRAPPC13-203ENST00000415825 SMIM31A0A1B0GVY4 71 aa-0.66□□□□□ -2.52
TRAPPC13-203ENST00000415825 TOMM5Q8N4H5 51 aa-0.68□□□□□ -2.52
TRAPPC13-203ENST00000415825 SNRPGP62308 76 aaKnown RBP-0.69□□□□□ -2.52
TRAPPC13-203ENST00000415825 H3BSH0 61 aa-0.7□□□□□ -2.52
TRAPPC13-203ENST00000415825 DEFB108BQ8NET1 73 aa-0.71□□□□□ -2.52
TRAPPC13-203ENST00000415825 RPL39P5Q59GN2 51 aa-0.72□□□□□ -2.52
TRAPPC13-203ENST00000415825 DEFB108AA8MXU0 73 aa-0.74□□□□□ -2.53
TRAPPC13-203ENST00000415825 STATHP02808 62 aa-0.77□□□□□ -2.53
Retrieved 78 of 20,778 RNA–protein pairs in 65.8 ms