RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 DNAH2Q9P225 4427 aa0.33□□□□□ -2.36
HMGB3P31-201ENST00000413333 DNAH17Q9UFH2 4485 aa0.32□□□□□ -2.36
HMGB3P31-201ENST00000413333 NOP10Q9NPE3 64 aaKnown RBP0.31□□□□□ -2.36
HMGB3P31-201ENST00000413333 C9orf92A6NGG3 77 aa0.3□□□□□ -2.36
HMGB3P31-201ENST00000413333 NDUFA1O15239 70 aa0.3□□□□□ -2.36
HMGB3P31-201ENST00000413333 SMR3BP02814 79 aaPredicted RBP0.29□□□□□ -2.36
HMGB3P31-201ENST00000413333 MUC17Q685J3 4493 aa0.28□□□□□ -2.36
HMGB3P31-201ENST00000413333 MMP24-AS1A0A0U1RRL7 71 aa0.28□□□□□ -2.36
HMGB3P31-201ENST00000413333 VPS13DQ5THJ4 4388 aa0.28□□□□□ -2.36
HMGB3P31-201ENST00000413333 DEFB131AP59861 70 aa0.27□□□□□ -2.37
HMGB3P31-201ENST00000413333 DEFB124Q8NES8 71 aa0.27□□□□□ -2.37
HMGB3P31-201ENST00000413333 H3BNG1 76 aa0.25□□□□□ -2.37
HMGB3P31-201ENST00000413333 M0QY20 66 aa0.25□□□□□ -2.37
HMGB3P31-201ENST00000413333 SPRR2FQ96RM1 72 aa0.25□□□□□ -2.37
HMGB3P31-201ENST00000413333 DNAH8Q96JB1 4490 aa0.25□□□□□ -2.37
HMGB3P31-201ENST00000413333 A8MTW9 85 aa0.23□□□□□ -2.37
HMGB3P31-201ENST00000413333 KRTAP6-2Q3LI66 62 aa0.23□□□□□ -2.37
HMGB3P31-201ENST00000413333 DUOX1Q9NRD9 1551 aa0.21□□□□□ -2.38
HMGB3P31-201ENST00000413333 M0QZ58 72 aa0.19□□□□□ -2.38
HMGB3P31-201ENST00000413333 TNP1P09430 55 aa0.19□□□□□ -2.38
HMGB3P31-201ENST00000413333 MT1AP04731 61 aa0.18□□□□□ -2.38
HMGB3P31-201ENST00000413333 DEFB104AQ8WTQ1 72 aa0.18□□□□□ -2.38
HMGB3P31-201ENST00000413333 KRTAP20-2Q3LI61 65 aa0.17□□□□□ -2.38
HMGB3P31-201ENST00000413333 DEFB110Q30KQ9 67 aa0.16□□□□□ -2.38
HMGB3P31-201ENST00000413333 GCC2Q8IWJ2 1684 aa0.16□□□□□ -2.38
HMGB3P31-201ENST00000413333 CLPSL2Q6UWE3 100 aa0.15□□□□□ -2.39
HMGB3P31-201ENST00000413333 SPRR2GQ9BYE4 73 aa0.15□□□□□ -2.39
HMGB3P31-201ENST00000413333 POLR2KP53803 58 aaKnown RBP0.14□□□□□ -2.39
HMGB3P31-201ENST00000413333 SNRPGP62308 76 aaKnown RBP0.12□□□□□ -2.39
HMGB3P31-201ENST00000413333 MT1HP80294 61 aa0.12□□□□□ -2.39
HMGB3P31-201ENST00000413333 KRTAP8-1Q8IUC2 63 aa0.1□□□□□ -2.39
HMGB3P31-201ENST00000413333 MT1HL1P0DM35 61 aa0.08□□□□□ -2.4
HMGB3P31-201ENST00000413333 RPL39P62891 51 aaKnown RBP0.08□□□□□ -2.4
HMGB3P31-201ENST00000413333 KRTAP19-5Q3LI72 72 aa0.08□□□□□ -2.4
HMGB3P31-201ENST00000413333 RPL39LQ96EH5 51 aaKnown RBP0.02□□□□□ -2.41
HMGB3P31-201ENST00000413333 SPART-AS1P0CW21 52 aa0.01□□□□□ -2.41
HMGB3P31-201ENST00000413333 STATHP02808 62 aa-0.01□□□□□ -2.41
HMGB3P31-201ENST00000413333 MT1BP07438 61 aa-0.01□□□□□ -2.41
HMGB3P31-201ENST00000413333 KRTAP6-1Q3LI64 71 aa-0.01□□□□□ -2.41
HMGB3P31-201ENST00000413333 MT2AP02795 61 aa-0.02□□□□□ -2.41
HMGB3P31-201ENST00000413333 MT1FP04733 61 aa-0.02□□□□□ -2.41
HMGB3P31-201ENST00000413333 KRTAP19-2Q3LHN2 52 aa-0.02□□□□□ -2.41
HMGB3P31-201ENST00000413333 TOMM7Q9P0U1 55 aa-0.02□□□□□ -2.41
HMGB3P31-201ENST00000413333 DEFB1P60022 68 aa-0.05□□□□□ -2.42
HMGB3P31-201ENST00000413333 KRTAP19-7Q3SYF9 63 aa-0.05□□□□□ -2.42
HMGB3P31-201ENST00000413333 LEAP2Q969E1 77 aa-0.05□□□□□ -2.42
HMGB3P31-201ENST00000413333 KRTAP19-8Q3LI54 63 aa-0.08□□□□□ -2.42
HMGB3P31-201ENST00000413333 LINC01590Q5TEZ4 76 aa-0.11□□□□□ -2.43
HMGB3P31-201ENST00000413333 MT1GP13640 62 aa-0.12□□□□□ -2.43
HMGB3P31-201ENST00000413333 ARHGAP5-AS1Q96IT6 56 aa-0.13□□□□□ -2.43
HMGB3P31-201ENST00000413333 MT1EP04732 61 aa-0.15□□□□□ -2.43
HMGB3P31-201ENST00000413333 MT1MQ8N339 61 aa-0.15□□□□□ -2.43
HMGB3P31-201ENST00000413333 RPS29P62273 56 aaKnown RBP-0.18□□□□□ -2.44
HMGB3P31-201ENST00000413333 TTTY10Q9BZA0 68 aa-0.18□□□□□ -2.44
HMGB3P31-201ENST00000413333 DEFB108AA8MXU0 73 aa-0.19□□□□□ -2.44
HMGB3P31-201ENST00000413333 MT1XP80297 61 aa-0.19□□□□□ -2.44
HMGB3P31-201ENST00000413333 MT1LQ93083 61 aa-0.19□□□□□ -2.44
HMGB3P31-201ENST00000413333 DEFB136Q30KP8 78 aa-0.2□□□□□ -2.44
HMGB3P31-201ENST00000413333 H3BSH0 61 aa-0.21□□□□□ -2.44
HMGB3P31-201ENST00000413333 Q9Y3F1 56 aa-0.21□□□□□ -2.44
HMGB3P31-201ENST00000413333 PRCDQ00LT1 54 aa-0.22□□□□□ -2.44
HMGB3P31-201ENST00000413333 DEFB4AO15263 64 aa-0.24□□□□□ -2.45
HMGB3P31-201ENST00000413333 DEFB133Q30KQ1 61 aa-0.24□□□□□ -2.45
HMGB3P31-201ENST00000413333 K7EIM0 57 aa-0.25□□□□□ -2.45
HMGB3P31-201ENST00000413333 CD52P31358 61 aa-0.25□□□□□ -2.45
HMGB3P31-201ENST00000413333 RHPN1-AS1Q9BWJ2 59 aa-0.25□□□□□ -2.45
HMGB3P31-201ENST00000413333 A0A096LNI7 61 aa-0.27□□□□□ -2.45
HMGB3P31-201ENST00000413333 DEFB108BQ8NET1 73 aa-0.3□□□□□ -2.46
HMGB3P31-201ENST00000413333 HTN1P15515 57 aa-0.32□□□□□ -2.46
HMGB3P31-201ENST00000413333 HTN3P15516 51 aa-0.33□□□□□ -2.46
HMGB3P31-201ENST00000413333 H3BUX3 64 aa-0.34□□□□□ -2.46
HMGB3P31-201ENST00000413333 TMEM167AQ8TBQ9 72 aa-0.36□□□□□ -2.47
HMGB3P31-201ENST00000413333 COX14Q96I36 57 aa-0.36□□□□□ -2.47
HMGB3P31-201ENST00000413333 RPL39P5Q59GN2 51 aa-0.4□□□□□ -2.47
HMGB3P31-201ENST00000413333 LINC01556Q5JQF7 62 aa-0.41□□□□□ -2.48
HMGB3P31-201ENST00000413333 APELAP0DMC3 54 aa-0.46□□□□□ -2.48
HMGB3P31-201ENST00000413333 A0A096LPF7 62 aa-0.49□□□□□ -2.49
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms