RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 DNAH7Q8WXX0 4024 aa3.56□□□□□ -1.84
SRGAP2-211ENST00000604423 KRTAP13-2Q52LG2 175 aa3.55□□□□□ -1.84
SRGAP2-211ENST00000604423 KRTAP5-9P26371 169 aa3.54□□□□□ -1.84
SRGAP2-211ENST00000604423 STAB2Q8WWQ8 2551 aa3.54□□□□□ -1.84
SRGAP2-211ENST00000604423 CRIPTQ9P021 101 aa3.53□□□□□ -1.84
SRGAP2-211ENST00000604423 SPINT4Q6UDR6 99 aa3.53□□□□□ -1.84
SRGAP2-211ENST00000604423 HECTD4Q9Y4D8 3996 aa3.51□□□□□ -1.85
SRGAP2-211ENST00000604423 TGP01266 2768 aa3.51□□□□□ -1.85
SRGAP2-211ENST00000604423 DYNC2H1Q8NCM8 4307 aaKnown RBP3.51□□□□□ -1.85
SRGAP2-211ENST00000604423 P0C880 135 aa3.51□□□□□ -1.85
SRGAP2-211ENST00000604423 MEGF8Q7Z7M0 2845 aa3.5□□□□□ -1.85
SRGAP2-211ENST00000604423 PLECQ15149 4684 aaKnown RBP3.48□□□□□ -1.85
SRGAP2-211ENST00000604423 COX6B2Q6YFQ2 88 aa3.48□□□□□ -1.85
SRGAP2-211ENST00000604423 DNAH17Q9UFH2 4485 aa3.47□□□□□ -1.85
SRGAP2-211ENST00000604423 KRTAP10-6P60371 365 aaPredicted RBP3.46□□□□□ -1.86
SRGAP2-211ENST00000604423 VPS13DQ5THJ4 4388 aa3.46□□□□□ -1.86
SRGAP2-211ENST00000604423 KRTAP1-4P0C5Y4 121 aa3.46□□□□□ -1.86
SRGAP2-211ENST00000604423 RPL37P61927 97 aaKnown RBP3.46□□□□□ -1.86
SRGAP2-211ENST00000604423 C9orf92A6NGG3 77 aa3.44□□□□□ -1.86
SRGAP2-211ENST00000604423 FLG2Q5D862 2391 aaPredicted RBP3.44□□□□□ -1.86
SRGAP2-211ENST00000604423 MGAM2Q2M2H8 2515 aa3.44□□□□□ -1.86
SRGAP2-211ENST00000604423 KRTAP10-7P60409 375 aaPredicted RBP3.43□□□□□ -1.86
SRGAP2-211ENST00000604423 RPS29P62273 56 aaKnown RBP3.43□□□□□ -1.86
SRGAP2-211ENST00000604423 C20orf166-AS1Q96NR2 134 aa3.42□□□□□ -1.86
SRGAP2-211ENST00000604423 KMT2AQ03164 3969 aa3.41□□□□□ -1.86
SRGAP2-211ENST00000604423 A0A0D9SG42 100 aa3.41□□□□□ -1.86
SRGAP2-211ENST00000604423 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
SRGAP2-211ENST00000604423 STARD9Q9P2P6 4700 aa3.4□□□□□ -1.86
SRGAP2-211ENST00000604423 PRKDCP78527 4128 aaKnown RBP3.4□□□□□ -1.86
SRGAP2-211ENST00000604423 DNAH2Q9P225 4427 aa3.39□□□□□ -1.87
SRGAP2-211ENST00000604423 DNAH11Q96DT5 4516 aa3.39□□□□□ -1.87
SRGAP2-211ENST00000604423 KRTAP10-1P60331 282 aa3.39□□□□□ -1.87
SRGAP2-211ENST00000604423 TPRXLQ17RH7 258 aa3.39□□□□□ -1.87
SRGAP2-211ENST00000604423 DNAH6Q9C0G6 4158 aa3.37□□□□□ -1.87
SRGAP2-211ENST00000604423 C10orf95Q9H7T3 257 aa3.37□□□□□ -1.87
SRGAP2-211ENST00000604423 SEC61BP60468 96 aaKnown RBP3.36□□□□□ -1.87
SRGAP2-211ENST00000604423 MT3P25713 68 aa3.34□□□□□ -1.87
SRGAP2-211ENST00000604423 KRTAP13-4Q3LI77 160 aa3.34□□□□□ -1.88
SRGAP2-211ENST00000604423 DNAH5Q8TE73 4624 aa3.34□□□□□ -1.88
SRGAP2-211ENST00000604423 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
SRGAP2-211ENST00000604423 S4R3F8 94 aa3.33□□□□□ -1.88
SRGAP2-211ENST00000604423 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
SRGAP2-211ENST00000604423 VPS13BQ7Z7G8 4022 aa3.3□□□□□ -1.88
SRGAP2-211ENST00000604423 LRP1BQ9NZR2 4599 aa3.28□□□□□ -1.88
SRGAP2-211ENST00000604423 KRTAP12-2P59991 146 aa3.27□□□□□ -1.89
SRGAP2-211ENST00000604423 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
SRGAP2-211ENST00000604423 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
SRGAP2-211ENST00000604423 SMR3BP02814 79 aaPredicted RBP3.23□□□□□ -1.89
SRGAP2-211ENST00000604423 KRTAP12-1P59990 96 aa3.23□□□□□ -1.89
SRGAP2-211ENST00000604423 PKD1P98161 4303 aa3.23□□□□□ -1.89
SRGAP2-211ENST00000604423 DMBT1Q9UGM3 2413 aaPredicted RBP3.22□□□□□ -1.89
SRGAP2-211ENST00000604423 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
SRGAP2-211ENST00000604423 RYR3Q15413 4870 aa3.2□□□□□ -1.9
SRGAP2-211ENST00000604423 M0QZ58 72 aa3.19□□□□□ -1.9
SRGAP2-211ENST00000604423 SACSQ9NZJ4 4579 aa3.19□□□□□ -1.9
SRGAP2-211ENST00000604423 FAT2Q9NYQ8 4349 aa3.19□□□□□ -1.9
SRGAP2-211ENST00000604423 BIRC6Q9NR09 4857 aa3.18□□□□□ -1.9
SRGAP2-211ENST00000604423 KMT2CQ8NEZ4 4911 aaKnown RBP3.18□□□□□ -1.9
SRGAP2-211ENST00000604423 PKHD1L1Q86WI1 4243 aa3.18□□□□□ -1.9
SRGAP2-211ENST00000604423 KRTAP10-8P60410 259 aa3.17□□□□□ -1.9
SRGAP2-211ENST00000604423 PLAC4Q8WY50 150 aa3.15□□□□□ -1.9
SRGAP2-211ENST00000604423 PKHD1P08F94 4074 aa3.15□□□□□ -1.91
SRGAP2-211ENST00000604423 RYR2Q92736 4967 aa3.12□□□□□ -1.91
SRGAP2-211ENST00000604423 APOBP04114 4563 aaKnown RBP3.11□□□□□ -1.91
SRGAP2-211ENST00000604423 KRTAP10-4P60372 401 aaPredicted RBP3.11□□□□□ -1.91
SRGAP2-211ENST00000604423 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
SRGAP2-211ENST00000604423 R4GN34 69 aa3.1□□□□□ -1.91
SRGAP2-211ENST00000604423 HYDINQ4G0P3 5121 aa3.1□□□□□ -1.91
SRGAP2-211ENST00000604423 EPPK1P58107 5090 aaKnown RBP3.09□□□□□ -1.91
SRGAP2-211ENST00000604423 KRTAP10-5P60370 271 aa3.09□□□□□ -1.91
SRGAP2-211ENST00000604423 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.92
SRGAP2-211ENST00000604423 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
SRGAP2-211ENST00000604423 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
SRGAP2-211ENST00000604423 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
SRGAP2-211ENST00000604423 LRP1Q07954 4544 aaKnown RBP3.04□□□□□ -1.92
SRGAP2-211ENST00000604423 FAT3Q8TDW7 4589 aa3.04□□□□□ -1.92
SRGAP2-211ENST00000604423 DYNC1H1Q14204 4646 aaKnown RBP3.03□□□□□ -1.92
SRGAP2-211ENST00000604423 A0A1B0GVY2 172 aa3.03□□□□□ -1.92
SRGAP2-211ENST00000604423 FAT1Q14517 4588 aa3.03□□□□□ -1.93
SRGAP2-211ENST00000604423 TNXBP22105 4242 aa3.02□□□□□ -1.93
SRGAP2-211ENST00000604423 HERC2O95714 4834 aa3.02□□□□□ -1.93
SRGAP2-211ENST00000604423 HSPG2P98160 4391 aa3.01□□□□□ -1.93
SRGAP2-211ENST00000604423 PCLOQ9Y6V0 5065 aa2.99□□□□□ -1.93
SRGAP2-211ENST00000604423 Q5VSD8 79 aa2.98□□□□□ -1.93
SRGAP2-211ENST00000604423 CAMK2N1Q7Z7J9 78 aa2.98□□□□□ -1.93
SRGAP2-211ENST00000604423 LCE3CQ5T5A8 94 aa2.95□□□□□ -1.94
SRGAP2-211ENST00000604423 MYCBP2O75592 4640 aa2.94□□□□□ -1.94
SRGAP2-211ENST00000604423 RYR1P21817 5038 aa2.94□□□□□ -1.94
SRGAP2-211ENST00000604423 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
SRGAP2-211ENST00000604423 KRTAP9-6A8MVA2 160 aa2.91□□□□□ -1.94
SRGAP2-211ENST00000604423 LPAP08519 4548 aa2.91□□□□□ -1.94
SRGAP2-211ENST00000604423 KIAA1109Q2LD37 5005 aa2.89□□□□□ -1.95
SRGAP2-211ENST00000604423 TNP1P09430 55 aa2.88□□□□□ -1.95
SRGAP2-211ENST00000604423 ABCA13Q86UQ4 5058 aa2.87□□□□□ -1.95
SRGAP2-211ENST00000604423 MT1HL1P0DM35 61 aa2.86□□□□□ -1.95
SRGAP2-211ENST00000604423 SPRR5A0A1B0GTR4 108 aa2.85□□□□□ -1.95
SRGAP2-211ENST00000604423 LRP2P98164 4655 aa2.82□□□□□ -1.96
SRGAP2-211ENST00000604423 PRO2289Q9P1D8 64 aa2.81□□□□□ -1.96
SRGAP2-211ENST00000604423 INE1O15225 51 aa2.76□□□□□ -1.97
SRGAP2-211ENST00000604423 HERC1Q15751 4861 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms