RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 PRO2289Q9P1D8 64 aa2.9□□□□□ -1.95
CAPN3-214ENST00000565274 DNAH17Q9UFH2 4485 aa2.89□□□□□ -1.95
CAPN3-214ENST00000565274 PSORS1C2Q9UIG4 136 aa2.89□□□□□ -1.95
CAPN3-214ENST00000565274 KRTAP9-6A8MVA2 160 aa2.88□□□□□ -1.95
CAPN3-214ENST00000565274 KRTAP5-9P26371 169 aa2.88□□□□□ -1.95
CAPN3-214ENST00000565274 ACYP2P14621 99 aa2.87□□□□□ -1.95
CAPN3-214ENST00000565274 LINC00304Q8N9R0 145 aa2.87□□□□□ -1.95
CAPN3-214ENST00000565274 SRRM2Q9UQ35 2752 aaKnown RBP2.86□□□□□ -1.95
CAPN3-214ENST00000565274 LYSTQ99698 3801 aa2.85□□□□□ -1.95
CAPN3-214ENST00000565274 COL7A1Q02388 2944 aa2.85□□□□□ -1.95
CAPN3-214ENST00000565274 TYMSOSQ8TAI1 123 aa2.85□□□□□ -1.95
CAPN3-214ENST00000565274 DNAH7Q8WXX0 4024 aa2.85□□□□□ -1.95
CAPN3-214ENST00000565274 PRKDCP78527 4128 aaKnown RBP2.85□□□□□ -1.95
CAPN3-214ENST00000565274 DNAH6Q9C0G6 4158 aa2.84□□□□□ -1.95
CAPN3-214ENST00000565274 DNAH2Q9P225 4427 aa2.84□□□□□ -1.95
CAPN3-214ENST00000565274 DNAH8Q96JB1 4490 aa2.84□□□□□ -1.95
CAPN3-214ENST00000565274 ALMS1Q8TCU4 4167 aa2.84□□□□□ -1.95
CAPN3-214ENST00000565274 TENM2Q9NT68 2774 aa2.84□□□□□ -1.95
CAPN3-214ENST00000565274 Q6ZSA8 131 aa2.83□□□□□ -1.96
CAPN3-214ENST00000565274 R4GN34 69 aa2.83□□□□□ -1.96
CAPN3-214ENST00000565274 CSMD3Q7Z407 3707 aa2.82□□□□□ -1.96
CAPN3-214ENST00000565274 HECTD4Q9Y4D8 3996 aa2.82□□□□□ -1.96
CAPN3-214ENST00000565274 MEGF8Q7Z7M0 2845 aa2.82□□□□□ -1.96
CAPN3-214ENST00000565274 KRTAP10-12P60413 245 aa2.82□□□□□ -1.96
CAPN3-214ENST00000565274 TPRXLQ17RH7 258 aa2.82□□□□□ -1.96
CAPN3-214ENST00000565274 STARD9Q9P2P6 4700 aa2.82□□□□□ -1.96
CAPN3-214ENST00000565274 FBN3Q75N90 2809 aa2.81□□□□□ -1.96
CAPN3-214ENST00000565274 SPINK6Q6UWN8 80 aa2.81□□□□□ -1.96
CAPN3-214ENST00000565274 RPS29P62273 56 aaKnown RBP2.79□□□□□ -1.96
CAPN3-214ENST00000565274 ANAPC11Q9NYG5 84 aa2.79□□□□□ -1.96
CAPN3-214ENST00000565274 DNAH11Q96DT5 4516 aa2.79□□□□□ -1.96
CAPN3-214ENST00000565274 KRTAP13-2Q52LG2 175 aa2.78□□□□□ -1.96
CAPN3-214ENST00000565274 KRTAP1-4P0C5Y4 121 aa2.77□□□□□ -1.97
CAPN3-214ENST00000565274 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
CAPN3-214ENST00000565274 DNAH5Q8TE73 4624 aa2.77□□□□□ -1.97
CAPN3-214ENST00000565274 LY6G6CO95867 125 aa2.76□□□□□ -1.97
CAPN3-214ENST00000565274 SPINK1P00995 79 aa2.75□□□□□ -1.97
CAPN3-214ENST00000565274 KRTAP10-1P60331 282 aa2.75□□□□□ -1.97
CAPN3-214ENST00000565274 TGP01266 2768 aa2.74□□□□□ -1.97
CAPN3-214ENST00000565274 LRP1BQ9NZR2 4599 aa2.74□□□□□ -1.97
CAPN3-214ENST00000565274 KMT2AQ03164 3969 aa2.74□□□□□ -1.97
CAPN3-214ENST00000565274 SACSQ9NZJ4 4579 aa2.73□□□□□ -1.97
CAPN3-214ENST00000565274 FAT2Q9NYQ8 4349 aa2.7□□□□□ -1.98
CAPN3-214ENST00000565274 FRAS1Q86XX4 4008 aa2.69□□□□□ -1.98
CAPN3-214ENST00000565274 PKD1P98161 4303 aa2.69□□□□□ -1.98
CAPN3-214ENST00000565274 CRIPTQ9P021 101 aa2.69□□□□□ -1.98
CAPN3-214ENST00000565274 KRTAP10-8P60410 259 aa2.68□□□□□ -1.98
CAPN3-214ENST00000565274 H0YAA0 97 aa2.67□□□□□ -1.98
CAPN3-214ENST00000565274 INE1O15225 51 aa2.67□□□□□ -1.98
CAPN3-214ENST00000565274 LCE3CQ5T5A8 94 aa2.66□□□□□ -1.98
CAPN3-214ENST00000565274 HYDINQ4G0P3 5121 aa2.65□□□□□ -1.98
CAPN3-214ENST00000565274 VPS13BQ7Z7G8 4022 aa2.65□□□□□ -1.98
CAPN3-214ENST00000565274 KRTAP10-4P60372 401 aaPredicted RBP2.65□□□□□ -1.99
CAPN3-214ENST00000565274 H1FX-AS1Q4G0G2 97 aa2.65□□□□□ -1.99
CAPN3-214ENST00000565274 DYNC1H1Q14204 4646 aaKnown RBP2.65□□□□□ -1.99
CAPN3-214ENST00000565274 A0A1B0GVY2 172 aa2.64□□□□□ -1.99
CAPN3-214ENST00000565274 PLAC4Q8WY50 150 aa2.64□□□□□ -1.99
CAPN3-214ENST00000565274 PKHD1L1Q86WI1 4243 aa2.64□□□□□ -1.99
CAPN3-214ENST00000565274 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
CAPN3-214ENST00000565274 KMT2CQ8NEZ4 4911 aaKnown RBP2.62□□□□□ -1.99
CAPN3-214ENST00000565274 RYR2Q92736 4967 aa2.61□□□□□ -1.99
CAPN3-214ENST00000565274 APOBP04114 4563 aaKnown RBP2.61□□□□□ -1.99
CAPN3-214ENST00000565274 COX6B2Q6YFQ2 88 aa2.58□□□□□ -2
CAPN3-214ENST00000565274 KRTAP4-3Q9BYR4 195 aa2.58□□□□□ -2
CAPN3-214ENST00000565274 RYR3Q15413 4870 aa2.56□□□□□ -2
CAPN3-214ENST00000565274 PKHD1P08F94 4074 aa2.55□□□□□ -2
CAPN3-214ENST00000565274 FAT1Q14517 4588 aa2.55□□□□□ -2
CAPN3-214ENST00000565274 C9orf92A6NGG3 77 aa2.55□□□□□ -2
CAPN3-214ENST00000565274 FLG2Q5D862 2391 aaPredicted RBP2.55□□□□□ -2
CAPN3-214ENST00000565274 KRTAP12-2P59991 146 aa2.54□□□□□ -2
CAPN3-214ENST00000565274 RPL37P61927 97 aaKnown RBP2.54□□□□□ -2
CAPN3-214ENST00000565274 C10orf95Q9H7T3 257 aa2.54□□□□□ -2
CAPN3-214ENST00000565274 SMR3BP02814 79 aaPredicted RBP2.53□□□□□ -2
CAPN3-214ENST00000565274 FAT3Q8TDW7 4589 aa2.52□□□□□ -2.01
CAPN3-214ENST00000565274 TNXBP22105 4242 aa2.51□□□□□ -2.01
CAPN3-214ENST00000565274 KRTAP13-4Q3LI77 160 aa2.5□□□□□ -2.01
CAPN3-214ENST00000565274 LRP1Q07954 4544 aaKnown RBP2.48□□□□□ -2.01
CAPN3-214ENST00000565274 HSPG2P98160 4391 aa2.48□□□□□ -2.01
CAPN3-214ENST00000565274 LCE3AQ5TA76 89 aa2.48□□□□□ -2.01
CAPN3-214ENST00000565274 Q5VSD8 79 aa2.48□□□□□ -2.01
CAPN3-214ENST00000565274 RYR1P21817 5038 aa2.48□□□□□ -2.01
CAPN3-214ENST00000565274 S4R3F8 94 aa2.47□□□□□ -2.01
CAPN3-214ENST00000565274 EPPK1P58107 5090 aaKnown RBP2.45□□□□□ -2.02
CAPN3-214ENST00000565274 A0A0D9SG42 100 aa2.45□□□□□ -2.02
CAPN3-214ENST00000565274 MT1HL1P0DM35 61 aa2.45□□□□□ -2.02
CAPN3-214ENST00000565274 KIAA1109Q2LD37 5005 aa2.44□□□□□ -2.02
CAPN3-214ENST00000565274 LCE3EQ5T5B0 92 aa2.43□□□□□ -2.02
CAPN3-214ENST00000565274 PP632Q6XCG6 107 aa2.43□□□□□ -2.02
CAPN3-214ENST00000565274 MYCBP2O75592 4640 aa2.43□□□□□ -2.02
CAPN3-214ENST00000565274 DMBT1Q9UGM3 2413 aaPredicted RBP2.42□□□□□ -2.02
CAPN3-214ENST00000565274 KRTAP12-1P59990 96 aa2.42□□□□□ -2.02
CAPN3-214ENST00000565274 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
CAPN3-214ENST00000565274 BIRC6Q9NR09 4857 aa2.42□□□□□ -2.02
CAPN3-214ENST00000565274 M0QZ58 72 aa2.41□□□□□ -2.02
CAPN3-214ENST00000565274 SPRR5A0A1B0GTR4 108 aa2.38□□□□□ -2.03
CAPN3-214ENST00000565274 HERC2O95714 4834 aa2.37□□□□□ -2.03
CAPN3-214ENST00000565274 ABCA13Q86UQ4 5058 aa2.32□□□□□ -2.04
CAPN3-214ENST00000565274 LRP2P98164 4655 aa2.31□□□□□ -2.04
CAPN3-214ENST00000565274 KRTAP19-2Q3LHN2 52 aa2.29□□□□□ -2.04
CAPN3-214ENST00000565274 MUC17Q685J3 4493 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms