RNA–Protein interactions for RNA: ENST00000563779.5

CMC2-206, Transcript of C-X9-C motif containing 2, humanhuman

TSL 1 (best)

Gene CMC2, Length 2,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC2-206ENST00000563779 SRRM2Q9UQ35 2752 aaKnown RBP3.25□□□□□ -1.89
CMC2-206ENST00000563779 Q6ZSA8 131 aa3.24□□□□□ -1.89
CMC2-206ENST00000563779 H0YAA0 97 aa3.24□□□□□ -1.89
CMC2-206ENST00000563779 RPS29P62273 56 aaKnown RBP3.21□□□□□ -1.89
CMC2-206ENST00000563779 A0A1B0GVY2 172 aa3.2□□□□□ -1.9
CMC2-206ENST00000563779 TRRAPQ9Y4A5 3859 aa3.18□□□□□ -1.9
CMC2-206ENST00000563779 DNAH3Q8TD57 4116 aa3.17□□□□□ -1.9
CMC2-206ENST00000563779 ANK2Q01484 3957 aa3.17□□□□□ -1.9
CMC2-206ENST00000563779 COX6B2Q6YFQ2 88 aa3.16□□□□□ -1.9
CMC2-206ENST00000563779 FBN1P35555 2871 aaKnown RBP3.16□□□□□ -1.9
CMC2-206ENST00000563779 NBEAL1Q6ZS30 2694 aa3.16□□□□□ -1.9
CMC2-206ENST00000563779 RPL37P61927 97 aaKnown RBP3.15□□□□□ -1.91
CMC2-206ENST00000563779 HUWE1Q7Z6Z7 4374 aaKnown RBP3.14□□□□□ -1.91
CMC2-206ENST00000563779 COL6A5A8TX70 2615 aa3.12□□□□□ -1.91
CMC2-206ENST00000563779 DNAH10Q8IVF4 4471 aa3.12□□□□□ -1.91
CMC2-206ENST00000563779 NOTCH1P46531 2555 aa3.12□□□□□ -1.91
CMC2-206ENST00000563779 CRIPTQ9P021 101 aa3.11□□□□□ -1.91
CMC2-206ENST00000563779 STAB1Q9NY15 2570 aa3.11□□□□□ -1.91
CMC2-206ENST00000563779 CMYA5Q8N3K9 4069 aa3.1□□□□□ -1.91
CMC2-206ENST00000563779 DYNC2H1Q8NCM8 4307 aaKnown RBP3.1□□□□□ -1.91
CMC2-206ENST00000563779 DNAH9Q9NYC9 4486 aa3.1□□□□□ -1.91
CMC2-206ENST00000563779 KRTAP5-9P26371 169 aa3.1□□□□□ -1.91
CMC2-206ENST00000563779 LYSTQ99698 3801 aa3.09□□□□□ -1.91
CMC2-206ENST00000563779 STAB2Q8WWQ8 2551 aa3.09□□□□□ -1.92
CMC2-206ENST00000563779 DNAH8Q96JB1 4490 aa3.07□□□□□ -1.92
CMC2-206ENST00000563779 C9orf92A6NGG3 77 aa3.07□□□□□ -1.92
CMC2-206ENST00000563779 KRTAP10-1P60331 282 aa3.07□□□□□ -1.92
CMC2-206ENST00000563779 TGP01266 2768 aa3.07□□□□□ -1.92
CMC2-206ENST00000563779 COL7A1Q02388 2944 aa3.06□□□□□ -1.92
CMC2-206ENST00000563779 FBN3Q75N90 2809 aa3.04□□□□□ -1.92
CMC2-206ENST00000563779 MEGF8Q7Z7M0 2845 aa3.04□□□□□ -1.92
CMC2-206ENST00000563779 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
CMC2-206ENST00000563779 A0A0D9SG42 100 aa3.03□□□□□ -1.92
CMC2-206ENST00000563779 KRTAP12-2P59991 146 aa3.03□□□□□ -1.92
CMC2-206ENST00000563779 CSMD3Q7Z407 3707 aa3.02□□□□□ -1.93
CMC2-206ENST00000563779 DNAH17Q9UFH2 4485 aa3.02□□□□□ -1.93
CMC2-206ENST00000563779 KRTAP10-5P60370 271 aa3.02□□□□□ -1.93
CMC2-206ENST00000563779 S4R3F8 94 aa3.02□□□□□ -1.93
CMC2-206ENST00000563779 HECTD4Q9Y4D8 3996 aa3.02□□□□□ -1.93
CMC2-206ENST00000563779 VPS13DQ5THJ4 4388 aa3.01□□□□□ -1.93
CMC2-206ENST00000563779 DNHD1Q96M86 4753 aa2.99□□□□□ -1.93
CMC2-206ENST00000563779 FRAS1Q86XX4 4008 aa2.99□□□□□ -1.93
CMC2-206ENST00000563779 KRTAP13-4Q3LI77 160 aa2.99□□□□□ -1.93
CMC2-206ENST00000563779 MGAM2Q2M2H8 2515 aa2.99□□□□□ -1.93
CMC2-206ENST00000563779 INE1O15225 51 aa2.99□□□□□ -1.93
CMC2-206ENST00000563779 DNAH7Q8WXX0 4024 aa2.98□□□□□ -1.93
CMC2-206ENST00000563779 PRKDCP78527 4128 aaKnown RBP2.97□□□□□ -1.93
CMC2-206ENST00000563779 M0QZ58 72 aa2.96□□□□□ -1.94
CMC2-206ENST00000563779 C10orf95Q9H7T3 257 aa2.96□□□□□ -1.94
CMC2-206ENST00000563779 PLECQ15149 4684 aaKnown RBP2.96□□□□□ -1.94
CMC2-206ENST00000563779 FLG2Q5D862 2391 aaPredicted RBP2.95□□□□□ -1.94
CMC2-206ENST00000563779 DNAH2Q9P225 4427 aa2.93□□□□□ -1.94
CMC2-206ENST00000563779 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
CMC2-206ENST00000563779 KRTAP12-1P59990 96 aa2.92□□□□□ -1.94
CMC2-206ENST00000563779 DNAH6Q9C0G6 4158 aa2.91□□□□□ -1.94
CMC2-206ENST00000563779 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.94
CMC2-206ENST00000563779 DNAH11Q96DT5 4516 aa2.9□□□□□ -1.95
CMC2-206ENST00000563779 SMR3BP02814 79 aaPredicted RBP2.89□□□□□ -1.95
CMC2-206ENST00000563779 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
CMC2-206ENST00000563779 STARD9Q9P2P6 4700 aa2.88□□□□□ -1.95
CMC2-206ENST00000563779 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
CMC2-206ENST00000563779 KRTAP9-6A8MVA2 160 aa2.86□□□□□ -1.95
CMC2-206ENST00000563779 PLAC4Q8WY50 150 aa2.86□□□□□ -1.95
CMC2-206ENST00000563779 KRTAP10-10P60014 251 aa2.86□□□□□ -1.95
CMC2-206ENST00000563779 KRTAP10-4P60372 401 aaPredicted RBP2.84□□□□□ -1.95
CMC2-206ENST00000563779 PP632Q6XCG6 107 aa2.84□□□□□ -1.95
CMC2-206ENST00000563779 KMT2AQ03164 3969 aa2.84□□□□□ -1.96
CMC2-206ENST00000563779 DNAH5Q8TE73 4624 aa2.83□□□□□ -1.96
CMC2-206ENST00000563779 KRTAP6-3Q3LI67 103 aa2.83□□□□□ -1.96
CMC2-206ENST00000563779 SACSQ9NZJ4 4579 aa2.82□□□□□ -1.96
CMC2-206ENST00000563779 LRP1BQ9NZR2 4599 aa2.82□□□□□ -1.96
CMC2-206ENST00000563779 PKD1P98161 4303 aa2.81□□□□□ -1.96
CMC2-206ENST00000563779 VPS13BQ7Z7G8 4022 aa2.81□□□□□ -1.96
CMC2-206ENST00000563779 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
CMC2-206ENST00000563779 DMBT1Q9UGM3 2413 aaPredicted RBP2.81□□□□□ -1.96
CMC2-206ENST00000563779 PKHD1L1Q86WI1 4243 aa2.77□□□□□ -1.97
CMC2-206ENST00000563779 PKHD1P08F94 4074 aa2.75□□□□□ -1.97
CMC2-206ENST00000563779 FAT2Q9NYQ8 4349 aa2.73□□□□□ -1.97
CMC2-206ENST00000563779 Q5VSD8 79 aa2.71□□□□□ -1.98
CMC2-206ENST00000563779 APOBP04114 4563 aaKnown RBP2.7□□□□□ -1.98
CMC2-206ENST00000563779 KMT2CQ8NEZ4 4911 aaKnown RBP2.68□□□□□ -1.98
CMC2-206ENST00000563779 RYR2Q92736 4967 aa2.65□□□□□ -1.99
CMC2-206ENST00000563779 TNP1P09430 55 aa2.65□□□□□ -1.99
CMC2-206ENST00000563779 TNXBP22105 4242 aa2.64□□□□□ -1.99
CMC2-206ENST00000563779 RYR3Q15413 4870 aa2.64□□□□□ -1.99
CMC2-206ENST00000563779 LRP1Q07954 4544 aaKnown RBP2.64□□□□□ -1.99
CMC2-206ENST00000563779 FAT3Q8TDW7 4589 aa2.63□□□□□ -1.99
CMC2-206ENST00000563779 MT1HL1P0DM35 61 aa2.61□□□□□ -1.99
CMC2-206ENST00000563779 HYDINQ4G0P3 5121 aa2.6□□□□□ -1.99
CMC2-206ENST00000563779 DYNC1H1Q14204 4646 aaKnown RBP2.6□□□□□ -1.99
CMC2-206ENST00000563779 FAT1Q14517 4588 aa2.6□□□□□ -1.99
CMC2-206ENST00000563779 HSPG2P98160 4391 aa2.6□□□□□ -1.99
CMC2-206ENST00000563779 BIRC6Q9NR09 4857 aa2.57□□□□□ -2
CMC2-206ENST00000563779 EPPK1P58107 5090 aaKnown RBP2.55□□□□□ -2
CMC2-206ENST00000563779 KRTAP5-8O75690 187 aa2.53□□□□□ -2
CMC2-206ENST00000563779 MYCBP2O75592 4640 aa2.51□□□□□ -2.01
CMC2-206ENST00000563779 HERC2O95714 4834 aa2.49□□□□□ -2.01
CMC2-206ENST00000563779 KRTAP12-3P60328 96 aa2.48□□□□□ -2.01
CMC2-206ENST00000563779 KRTAP12-4P60329 112 aa2.46□□□□□ -2.01
CMC2-206ENST00000563779 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms