RNA–Protein interactions for RNA: ENST00000561458.5

AC055874.1-201, humanhuman

TSL 2 BASIC

Gene AC055874.1, Length 479 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055874.1-201ENST00000561458 A0A087WTM6 91 aa3.08□□□□□ -1.92
AC055874.1-201ENST00000561458 NUPR2A6NF83 97 aa3.08□□□□□ -1.92
AC055874.1-201ENST00000561458 ANAPC11Q9NYG5 84 aa3.08□□□□□ -1.92
AC055874.1-201ENST00000561458 A8MUU9 505 aa3.07□□□□□ -1.92
AC055874.1-201ENST00000561458 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
AC055874.1-201ENST00000561458 COL7A1Q02388 2944 aa3.06□□□□□ -1.92
AC055874.1-201ENST00000561458 RPS29P62273 56 aaKnown RBP3.06□□□□□ -1.92
AC055874.1-201ENST00000561458 CSAG1Q6PB30 78 aa3.06□□□□□ -1.92
AC055874.1-201ENST00000561458 DNAH7Q8WXX0 4024 aa3.05□□□□□ -1.92
AC055874.1-201ENST00000561458 KRTAP25-1Q3LHN0 102 aa3.04□□□□□ -1.92
AC055874.1-201ENST00000561458 MEGF8Q7Z7M0 2845 aa3.03□□□□□ -1.92
AC055874.1-201ENST00000561458 H0YAA0 97 aa3.03□□□□□ -1.92
AC055874.1-201ENST00000561458 SPINK6Q6UWN8 80 aa3.03□□□□□ -1.92
AC055874.1-201ENST00000561458 CIRBP-AS1Q8TBR5 109 aa3.02□□□□□ -1.93
AC055874.1-201ENST00000561458 PLECQ15149 4684 aaKnown RBP3.02□□□□□ -1.93
AC055874.1-201ENST00000561458 DNAH2Q9P225 4427 aa3.01□□□□□ -1.93
AC055874.1-201ENST00000561458 KRTAP13-2Q52LG2 175 aa3.01□□□□□ -1.93
AC055874.1-201ENST00000561458 Q6ZSA8 131 aa3.01□□□□□ -1.93
AC055874.1-201ENST00000561458 TGP01266 2768 aa3□□□□□ -1.93
AC055874.1-201ENST00000561458 ROMO1P60602 79 aa3□□□□□ -1.93
AC055874.1-201ENST00000561458 KRTAP1-4P0C5Y4 121 aa2.99□□□□□ -1.93
AC055874.1-201ENST00000561458 CSMD3Q7Z407 3707 aa2.99□□□□□ -1.93
AC055874.1-201ENST00000561458 FRAS1Q86XX4 4008 aa2.99□□□□□ -1.93
AC055874.1-201ENST00000561458 SPINK1P00995 79 aa2.98□□□□□ -1.93
AC055874.1-201ENST00000561458 LINC00304Q8N9R0 145 aa2.98□□□□□ -1.93
AC055874.1-201ENST00000561458 H1FX-AS1Q4G0G2 97 aa2.97□□□□□ -1.93
AC055874.1-201ENST00000561458 C1orf134Q5TEV5 83 aa2.97□□□□□ -1.93
AC055874.1-201ENST00000561458 FBN3Q75N90 2809 aa2.97□□□□□ -1.93
AC055874.1-201ENST00000561458 DNAH11Q96DT5 4516 aa2.96□□□□□ -1.94
AC055874.1-201ENST00000561458 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.94
AC055874.1-201ENST00000561458 C20orf166-AS1Q96NR2 134 aa2.96□□□□□ -1.94
AC055874.1-201ENST00000561458 A0A1B0GU33 70 aa2.95□□□□□ -1.94
AC055874.1-201ENST00000561458 STARD9Q9P2P6 4700 aa2.94□□□□□ -1.94
AC055874.1-201ENST00000561458 K7ERS5 55 aa2.94□□□□□ -1.94
AC055874.1-201ENST00000561458 LCE3AQ5TA76 89 aa2.94□□□□□ -1.94
AC055874.1-201ENST00000561458 COX6B2Q6YFQ2 88 aa2.94□□□□□ -1.94
AC055874.1-201ENST00000561458 SACSQ9NZJ4 4579 aa2.94□□□□□ -1.94
AC055874.1-201ENST00000561458 TYMSOSQ8TAI1 123 aa2.92□□□□□ -1.94
AC055874.1-201ENST00000561458 DNAH5Q8TE73 4624 aa2.91□□□□□ -1.94
AC055874.1-201ENST00000561458 PKHD1L1Q86WI1 4243 aa2.9□□□□□ -1.95
AC055874.1-201ENST00000561458 P0C880 135 aa2.87□□□□□ -1.95
AC055874.1-201ENST00000561458 KMT2AQ03164 3969 aa2.87□□□□□ -1.95
AC055874.1-201ENST00000561458 VPS13BQ7Z7G8 4022 aa2.86□□□□□ -1.95
AC055874.1-201ENST00000561458 RPL37P61927 97 aaKnown RBP2.86□□□□□ -1.95
AC055874.1-201ENST00000561458 LRP1BQ9NZR2 4599 aa2.86□□□□□ -1.95
AC055874.1-201ENST00000561458 KRTAP10-1P60331 282 aa2.85□□□□□ -1.95
AC055874.1-201ENST00000561458 PKD1P98161 4303 aa2.84□□□□□ -1.95
AC055874.1-201ENST00000561458 FLG2Q5D862 2391 aaPredicted RBP2.83□□□□□ -1.96
AC055874.1-201ENST00000561458 PKHD1P08F94 4074 aa2.82□□□□□ -1.96
AC055874.1-201ENST00000561458 FAT2Q9NYQ8 4349 aa2.82□□□□□ -1.96
AC055874.1-201ENST00000561458 KRTAP10-8P60410 259 aa2.81□□□□□ -1.96
AC055874.1-201ENST00000561458 TPRXLQ17RH7 258 aa2.8□□□□□ -1.96
AC055874.1-201ENST00000561458 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
AC055874.1-201ENST00000561458 APOBP04114 4563 aaKnown RBP2.78□□□□□ -1.96
AC055874.1-201ENST00000561458 TNXBP22105 4242 aa2.77□□□□□ -1.97
AC055874.1-201ENST00000561458 KRTAP10-4P60372 401 aaPredicted RBP2.77□□□□□ -1.97
AC055874.1-201ENST00000561458 KRTAP13-4Q3LI77 160 aa2.77□□□□□ -1.97
AC055874.1-201ENST00000561458 DMBT1Q9UGM3 2413 aaPredicted RBP2.76□□□□□ -1.97
AC055874.1-201ENST00000561458 KRTAP12-2P59991 146 aa2.76□□□□□ -1.97
AC055874.1-201ENST00000561458 S4R3F8 94 aa2.75□□□□□ -1.97
AC055874.1-201ENST00000561458 CRIPTQ9P021 101 aa2.74□□□□□ -1.97
AC055874.1-201ENST00000561458 M0QZ58 72 aa2.73□□□□□ -1.97
AC055874.1-201ENST00000561458 SPINT4Q6UDR6 99 aa2.73□□□□□ -1.97
AC055874.1-201ENST00000561458 C9orf92A6NGG3 77 aa2.72□□□□□ -1.97
AC055874.1-201ENST00000561458 KRTAP12-1P59990 96 aa2.72□□□□□ -1.97
AC055874.1-201ENST00000561458 DYNC1H1Q14204 4646 aaKnown RBP2.72□□□□□ -1.97
AC055874.1-201ENST00000561458 LRP1Q07954 4544 aaKnown RBP2.7□□□□□ -1.98
AC055874.1-201ENST00000561458 HSPG2P98160 4391 aa2.69□□□□□ -1.98
AC055874.1-201ENST00000561458 KRTAP5-5Q701N2 237 aaPredicted RBP2.68□□□□□ -1.98
AC055874.1-201ENST00000561458 FAT1Q14517 4588 aa2.67□□□□□ -1.98
AC055874.1-201ENST00000561458 A0A0D9SG42 100 aa2.66□□□□□ -1.98
AC055874.1-201ENST00000561458 C10orf95Q9H7T3 257 aa2.66□□□□□ -1.98
AC055874.1-201ENST00000561458 FAT3Q8TDW7 4589 aa2.65□□□□□ -1.99
AC055874.1-201ENST00000561458 PP632Q6XCG6 107 aa2.62□□□□□ -1.99
AC055874.1-201ENST00000561458 HYDINQ4G0P3 5121 aa2.62□□□□□ -1.99
AC055874.1-201ENST00000561458 DNHD1Q96M86 4753 aa2.59□□□□□ -1.99
AC055874.1-201ENST00000561458 MYCBP2O75592 4640 aa2.59□□□□□ -2
AC055874.1-201ENST00000561458 LCE1CQ5T751 118 aa2.58□□□□□ -2
AC055874.1-201ENST00000561458 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
AC055874.1-201ENST00000561458 PLAC4Q8WY50 150 aa2.57□□□□□ -2
AC055874.1-201ENST00000561458 KRTAP21-3Q3LHN1 58 aa2.56□□□□□ -2
AC055874.1-201ENST00000561458 SMR3BP02814 79 aaPredicted RBP2.55□□□□□ -2
AC055874.1-201ENST00000561458 LUZP6Q538Z0 58 aa2.54□□□□□ -2
AC055874.1-201ENST00000561458 SPRR5A0A1B0GTR4 108 aa2.53□□□□□ -2
AC055874.1-201ENST00000561458 RYR2Q92736 4967 aa2.51□□□□□ -2.01
AC055874.1-201ENST00000561458 MT1HL1P0DM35 61 aa2.51□□□□□ -2.01
AC055874.1-201ENST00000561458 R4GN34 69 aa2.51□□□□□ -2.01
AC055874.1-201ENST00000561458 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
AC055874.1-201ENST00000561458 Q5VSD8 79 aa2.48□□□□□ -2.01
AC055874.1-201ENST00000561458 RYR1P21817 5038 aa2.48□□□□□ -2.01
AC055874.1-201ENST00000561458 CAMK2N1Q7Z7J9 78 aa2.44□□□□□ -2.02
AC055874.1-201ENST00000561458 FLGP20930 4061 aaPredicted RBP2.43□□□□□ -2.02
AC055874.1-201ENST00000561458 KMT2CQ8NEZ4 4911 aaKnown RBP2.42□□□□□ -2.02
AC055874.1-201ENST00000561458 KRTAP19-2Q3LHN2 52 aa2.42□□□□□ -2.02
AC055874.1-201ENST00000561458 LRP2P98164 4655 aa2.41□□□□□ -2.02
AC055874.1-201ENST00000561458 TNP1P09430 55 aa2.4□□□□□ -2.03
AC055874.1-201ENST00000561458 HERC1Q15751 4861 aa2.38□□□□□ -2.03
AC055874.1-201ENST00000561458 MUC17Q685J3 4493 aa2.38□□□□□ -2.03
AC055874.1-201ENST00000561458 RYR3Q15413 4870 aa2.36□□□□□ -2.03
AC055874.1-201ENST00000561458 PRO2289Q9P1D8 64 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms