RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
NEDD1-211ENST00000557454 TMEM256-PLSCR3K7ERE1 68 aa3.37□□□□□ -1.87
NEDD1-211ENST00000557454 DNAL4O96015 105 aa3.37□□□□□ -1.87
NEDD1-211ENST00000557454 APOC3P02656 99 aa3.37□□□□□ -1.87
NEDD1-211ENST00000557454 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
NEDD1-211ENST00000557454 R4GN34 69 aa3.37□□□□□ -1.87
NEDD1-211ENST00000557454 KRTDAPP60985 99 aa3.36□□□□□ -1.87
NEDD1-211ENST00000557454 H3BQ85 93 aa3.35□□□□□ -1.87
NEDD1-211ENST00000557454 SNAPINO95295 136 aa3.35□□□□□ -1.87
NEDD1-211ENST00000557454 LINC01554Q52M75 96 aa3.34□□□□□ -1.87
NEDD1-211ENST00000557454 HIST1H4GQ99525 98 aa3.34□□□□□ -1.87
NEDD1-211ENST00000557454 HCG22E2RYF7 251 aa3.33□□□□□ -1.88
NEDD1-211ENST00000557454 M0QZ58 72 aa3.33□□□□□ -1.88
NEDD1-211ENST00000557454 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
NEDD1-211ENST00000557454 SVBPQ8N300 66 aa3.32□□□□□ -1.88
NEDD1-211ENST00000557454 A0A0B4J2C4 111 aa3.3□□□□□ -1.88
NEDD1-211ENST00000557454 C9JAW5 83 aa3.3□□□□□ -1.88
NEDD1-211ENST00000557454 NDUFC1O43677 76 aa3.27□□□□□ -1.89
NEDD1-211ENST00000557454 NDUFA5Q16718 116 aa3.27□□□□□ -1.89
NEDD1-211ENST00000557454 CEND1Q8N111 149 aa3.27□□□□□ -1.89
NEDD1-211ENST00000557454 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
NEDD1-211ENST00000557454 P0C880 135 aa3.25□□□□□ -1.89
NEDD1-211ENST00000557454 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
NEDD1-211ENST00000557454 KRTAP19-5Q3LI72 72 aa3.24□□□□□ -1.89
NEDD1-211ENST00000557454 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
NEDD1-211ENST00000557454 MT1LQ93083 61 aa3.24□□□□□ -1.89
NEDD1-211ENST00000557454 HIST1H2BKO60814 126 aa3.23□□□□□ -1.89
NEDD1-211ENST00000557454 HIST1H2BJP06899 126 aa3.23□□□□□ -1.89
NEDD1-211ENST00000557454 HIST1H2BOP23527 126 aa3.23□□□□□ -1.89
NEDD1-211ENST00000557454 HIST1H2BBP33778 126 aa3.23□□□□□ -1.89
NEDD1-211ENST00000557454 HIST1H2BDP58876 126 aa3.23□□□□□ -1.89
NEDD1-211ENST00000557454 HIST1H2BCP62807 126 aa3.23□□□□□ -1.89
NEDD1-211ENST00000557454 HIST2H2BEQ16778 126 aa3.23□□□□□ -1.89
NEDD1-211ENST00000557454 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.23□□□□□ -1.89
NEDD1-211ENST00000557454 CASC2Q6XLA1 102 aa3.23□□□□□ -1.89
NEDD1-211ENST00000557454 HIST1H2BHQ93079 126 aa3.23□□□□□ -1.89
NEDD1-211ENST00000557454 HIST1H2BNQ99877 126 aa3.23□□□□□ -1.89
NEDD1-211ENST00000557454 HIST1H2BMQ99879 126 aa3.23□□□□□ -1.89
NEDD1-211ENST00000557454 NREPQ16612 68 aa3.22□□□□□ -1.89
NEDD1-211ENST00000557454 PRO1854Q9UHT4 67 aa3.22□□□□□ -1.89
NEDD1-211ENST00000557454 A0A1B0GW54 56 aa3.2□□□□□ -1.9
NEDD1-211ENST00000557454 HSBP1L1C9JCN9 74 aa3.18□□□□□ -1.9
NEDD1-211ENST00000557454 KRTAP5-5Q701N2 237 aaPredicted RBP3.18□□□□□ -1.9
NEDD1-211ENST00000557454 C20orf197Q8N268 126 aa3.17□□□□□ -1.9
NEDD1-211ENST00000557454 Q8N9L7 120 aa3.17□□□□□ -1.9
NEDD1-211ENST00000557454 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
NEDD1-211ENST00000557454 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
NEDD1-211ENST00000557454 K7EP34 96 aa3.16□□□□□ -1.9
NEDD1-211ENST00000557454 PSMB2P49721 201 aa3.16□□□□□ -1.9
NEDD1-211ENST00000557454 COA6Q5JTJ3 125 aaKnown RBP3.16□□□□□ -1.9
NEDD1-211ENST00000557454 LOC110117498A0A087WWA1 95 aa3.15□□□□□ -1.91
NEDD1-211ENST00000557454 BATFQ16520 125 aa3.15□□□□□ -1.91
NEDD1-211ENST00000557454 A0A1W2PPM0 123 aa3.13□□□□□ -1.91
NEDD1-211ENST00000557454 A8MU10 97 aa3.12□□□□□ -1.91
NEDD1-211ENST00000557454 COX6CP09669 75 aa3.12□□□□□ -1.91
NEDD1-211ENST00000557454 BAALC-AS2P0C853 105 aa3.12□□□□□ -1.91
NEDD1-211ENST00000557454 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
NEDD1-211ENST00000557454 HIST3H2BBQ8N257 126 aa3.12□□□□□ -1.91
NEDD1-211ENST00000557454 BPY2O14599 106 aa3.11□□□□□ -1.91
NEDD1-211ENST00000557454 COX8AP10176 69 aa3.11□□□□□ -1.91
NEDD1-211ENST00000557454 FXYD2P54710 66 aa3.1□□□□□ -1.91
NEDD1-211ENST00000557454 C14orf132Q9NPU4 83 aa3.1□□□□□ -1.91
NEDD1-211ENST00000557454 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
NEDD1-211ENST00000557454 CYP4F30PQ9H0H9 118 aa3.09□□□□□ -1.91
NEDD1-211ENST00000557454 JMJD7-PLA2G4BH0Y9G9 81 aa3.08□□□□□ -1.92
NEDD1-211ENST00000557454 K7ERJ3 54 aa3.08□□□□□ -1.92
NEDD1-211ENST00000557454 MT-ATP8P03928 68 aa3.08□□□□□ -1.92
NEDD1-211ENST00000557454 DLEU1O43261 78 aa3.07□□□□□ -1.92
NEDD1-211ENST00000557454 HIGD1BQ9P298 99 aa3.07□□□□□ -1.92
NEDD1-211ENST00000557454 HIST1H2BLQ99880 126 aa3.06□□□□□ -1.92
NEDD1-211ENST00000557454 NAA38Q9BRA0 125 aaKnown RBP3.06□□□□□ -1.92
NEDD1-211ENST00000557454 A0A0D9SG42 100 aa3.05□□□□□ -1.92
NEDD1-211ENST00000557454 C14orf144Q96I85 54 aa3.04□□□□□ -1.92
NEDD1-211ENST00000557454 SEC61GP60059 68 aa3.03□□□□□ -1.92
NEDD1-211ENST00000557454 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
NEDD1-211ENST00000557454 ACYP1P07311 99 aa3.01□□□□□ -1.93
NEDD1-211ENST00000557454 PCP4L1A6NKN8 68 aa3□□□□□ -1.93
NEDD1-211ENST00000557454 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
NEDD1-211ENST00000557454 SCGB1C2P0DMR2 95 aa3□□□□□ -1.93
NEDD1-211ENST00000557454 CAMK2N1Q7Z7J9 78 aa3□□□□□ -1.93
NEDD1-211ENST00000557454 TP53AIP1Q9HCN2 124 aa2.99□□□□□ -1.93
NEDD1-211ENST00000557454 TRAV22A0A0B4J277 110 aa2.96□□□□□ -1.94
NEDD1-211ENST00000557454 LOC101927531A0A1B0GV80 90 aa2.95□□□□□ -1.94
NEDD1-211ENST00000557454 ATXN8Q156A1 80 aa2.94□□□□□ -1.94
NEDD1-211ENST00000557454 C10orf95Q9H7T3 257 aa2.91□□□□□ -1.94
NEDD1-211ENST00000557454 SPATA45Q537H7 98 aa2.9□□□□□ -1.95
NEDD1-211ENST00000557454 VAMP8Q9BV40 100 aa2.9□□□□□ -1.95
NEDD1-211ENST00000557454 S100A2P29034 98 aa2.88□□□□□ -1.95
NEDD1-211ENST00000557454 PRO0461Q9UI25 63 aa2.88□□□□□ -1.95
NEDD1-211ENST00000557454 HSD52Q0P140 79 aa2.86□□□□□ -1.95
NEDD1-211ENST00000557454 LCE3AQ5TA76 89 aa2.85□□□□□ -1.95
NEDD1-211ENST00000557454 KRTAP6-1Q3LI64 71 aa2.79□□□□□ -1.96
NEDD1-211ENST00000557454 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
NEDD1-211ENST00000557454 SPCS1Q9Y6A9 102 aa2.79□□□□□ -1.96
NEDD1-211ENST00000557454 KRTAP13-4Q3LI77 160 aa2.77□□□□□ -1.97
NEDD1-211ENST00000557454 H0Y9P7 68 aa2.75□□□□□ -1.97
NEDD1-211ENST00000557454 MT1AP04731 61 aa2.73□□□□□ -1.97
NEDD1-211ENST00000557454 UBL5Q9BZL1 73 aa2.73□□□□□ -1.97
NEDD1-211ENST00000557454 TSTD3H0UI37 97 aa2.72□□□□□ -1.97
NEDD1-211ENST00000557454 ATOX1O00244 68 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms