RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
PSEN1-220ENST00000557037 ADM2Q7Z4H4 148 aa4.75□□□□□ -1.65
PSEN1-220ENST00000557037 CYSTM1Q9H1C7 97 aa4.75□□□□□ -1.65
PSEN1-220ENST00000557037 PCP4P48539 62 aa4.73□□□□□ -1.65
PSEN1-220ENST00000557037 PSMB2P49721 201 aa4.72□□□□□ -1.65
PSEN1-220ENST00000557037 H0YAA0 97 aa4.71□□□□□ -1.66
PSEN1-220ENST00000557037 COA6Q5JTJ3 125 aaKnown RBP4.71□□□□□ -1.66
PSEN1-220ENST00000557037 NREPQ16612 68 aa4.7□□□□□ -1.66
PSEN1-220ENST00000557037 KRTAP5-4Q6L8H1 288 aa4.7□□□□□ -1.66
PSEN1-220ENST00000557037 COX8AP10176 69 aa4.69□□□□□ -1.66
PSEN1-220ENST00000557037 CXCL6P80162 114 aa4.68□□□□□ -1.66
PSEN1-220ENST00000557037 MT1EP04732 61 aa4.67□□□□□ -1.66
PSEN1-220ENST00000557037 KRTAP19-7Q3SYF9 63 aa4.67□□□□□ -1.66
PSEN1-220ENST00000557037 CASC2Q6XLA1 102 aa4.66□□□□□ -1.66
PSEN1-220ENST00000557037 A0A1B0GW54 56 aa4.65□□□□□ -1.67
PSEN1-220ENST00000557037 KRTAP4-11Q9BYQ6 195 aa4.65□□□□□ -1.67
PSEN1-220ENST00000557037 R4GN34 69 aa4.65□□□□□ -1.67
PSEN1-220ENST00000557037 COX6CP09669 75 aa4.64□□□□□ -1.67
PSEN1-220ENST00000557037 BAALC-AS2P0C853 105 aa4.64□□□□□ -1.67
PSEN1-220ENST00000557037 FXYD2P54710 66 aa4.64□□□□□ -1.67
PSEN1-220ENST00000557037 LINC01554Q52M75 96 aa4.64□□□□□ -1.67
PSEN1-220ENST00000557037 HIST3H2BBQ8N257 126 aa4.64□□□□□ -1.67
PSEN1-220ENST00000557037 DLEU1O43261 78 aa4.63□□□□□ -1.67
PSEN1-220ENST00000557037 HIGD1BQ9P298 99 aa4.62□□□□□ -1.67
PSEN1-220ENST00000557037 LOC110117498A0A087WWA1 95 aa4.61□□□□□ -1.67
PSEN1-220ENST00000557037 K7ERJ3 54 aa4.61□□□□□ -1.67
PSEN1-220ENST00000557037 M0QZ58 72 aa4.61□□□□□ -1.67
PSEN1-220ENST00000557037 NDUFC1O43677 76 aa4.61□□□□□ -1.67
PSEN1-220ENST00000557037 C14orf144Q96I85 54 aa4.61□□□□□ -1.67
PSEN1-220ENST00000557037 Q8N9L7 120 aa4.6□□□□□ -1.67
PSEN1-220ENST00000557037 PAM16Q9Y3D7 125 aa4.58□□□□□ -1.68
PSEN1-220ENST00000557037 C14orf132Q9NPU4 83 aa4.57□□□□□ -1.68
PSEN1-220ENST00000557037 BPY2O14599 106 aa4.55□□□□□ -1.68
PSEN1-220ENST00000557037 MT1GP13640 62 aa4.55□□□□□ -1.68
PSEN1-220ENST00000557037 HIST1H2BLQ99880 126 aa4.55□□□□□ -1.68
PSEN1-220ENST00000557037 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
PSEN1-220ENST00000557037 MUC5ACP98088 5654 aa4.55□□□□□ -1.68
PSEN1-220ENST00000557037 JMJD7-PLA2G4BH0Y9G9 81 aa4.54□□□□□ -1.68
PSEN1-220ENST00000557037 P0C880 135 aa4.54□□□□□ -1.68
PSEN1-220ENST00000557037 SCGB1C2P0DMR2 95 aa4.54□□□□□ -1.68
PSEN1-220ENST00000557037 KRTAP20-2Q3LI61 65 aa4.52□□□□□ -1.69
PSEN1-220ENST00000557037 MT1MQ8N339 61 aa4.52□□□□□ -1.69
PSEN1-220ENST00000557037 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
PSEN1-220ENST00000557037 MUC5BQ9HC84 5762 aaPredicted RBP4.51□□□□□ -1.69
PSEN1-220ENST00000557037 K7EP34 96 aa4.5□□□□□ -1.69
PSEN1-220ENST00000557037 KRTAP4-3Q9BYR4 195 aa4.5□□□□□ -1.69
PSEN1-220ENST00000557037 S100A2P29034 98 aa4.49□□□□□ -1.69
PSEN1-220ENST00000557037 CYP4F30PQ9H0H9 118 aa4.46□□□□□ -1.7
PSEN1-220ENST00000557037 SPATA45Q537H7 98 aa4.45□□□□□ -1.7
PSEN1-220ENST00000557037 A0A0A0MQY5 61 aa4.43□□□□□ -1.7
PSEN1-220ENST00000557037 C20orf197Q8N268 126 aa4.43□□□□□ -1.7
PSEN1-220ENST00000557037 BATFQ16520 125 aa4.41□□□□□ -1.7
PSEN1-220ENST00000557037 ATXN8Q156A1 80 aa4.4□□□□□ -1.71
PSEN1-220ENST00000557037 KRTAP19-5Q3LI72 72 aa4.39□□□□□ -1.71
PSEN1-220ENST00000557037 HSD52Q0P140 79 aa4.37□□□□□ -1.71
PSEN1-220ENST00000557037 VAMP8Q9BV40 100 aa4.36□□□□□ -1.71
PSEN1-220ENST00000557037 TP53AIP1Q9HCN2 124 aa4.35□□□□□ -1.71
PSEN1-220ENST00000557037 MT1LQ93083 61 aa4.34□□□□□ -1.71
PSEN1-220ENST00000557037 ACYP1P07311 99 aa4.33□□□□□ -1.72
PSEN1-220ENST00000557037 NAA38Q9BRA0 125 aaKnown RBP4.33□□□□□ -1.72
PSEN1-220ENST00000557037 MT-ATP8P03928 68 aa4.32□□□□□ -1.72
PSEN1-220ENST00000557037 A0A1W2PPM0 123 aa4.31□□□□□ -1.72
PSEN1-220ENST00000557037 TRAV22A0A0B4J277 110 aa4.28□□□□□ -1.72
PSEN1-220ENST00000557037 LOC101927531A0A1B0GV80 90 aa4.27□□□□□ -1.73
PSEN1-220ENST00000557037 KRTAP12-4P60329 112 aa4.26□□□□□ -1.73
PSEN1-220ENST00000557037 KRTAP5-8O75690 187 aa4.25□□□□□ -1.73
PSEN1-220ENST00000557037 SYNE1Q8NF91 8797 aaKnown RBP4.25□□□□□ -1.73
PSEN1-220ENST00000557037 S100A6P06703 90 aa4.23□□□□□ -1.73
PSEN1-220ENST00000557037 A0A0D9SG42 100 aa4.21□□□□□ -1.74
PSEN1-220ENST00000557037 S100A1P23297 94 aa4.19□□□□□ -1.74
PSEN1-220ENST00000557037 CAMK2N1Q7Z7J9 78 aa4.19□□□□□ -1.74
PSEN1-220ENST00000557037 KRTAP5-5Q701N2 237 aaPredicted RBP4.17□□□□□ -1.74
PSEN1-220ENST00000557037 TSTD3H0UI37 97 aa4.15□□□□□ -1.75
PSEN1-220ENST00000557037 SPCS1Q9Y6A9 102 aa4.12□□□□□ -1.75
PSEN1-220ENST00000557037 UBL5Q9BZL1 73 aa4.1□□□□□ -1.75
PSEN1-220ENST00000557037 H0Y9P7 68 aa4.06□□□□□ -1.76
PSEN1-220ENST00000557037 H3BT86 120 aa4.05□□□□□ -1.76
PSEN1-220ENST00000557037 UQCR10Q9UDW1 63 aa4.05□□□□□ -1.76
PSEN1-220ENST00000557037 ATOX1O00244 68 aa4□□□□□ -1.77
PSEN1-220ENST00000557037 C10orf95Q9H7T3 257 aa3.99□□□□□ -1.77
PSEN1-220ENST00000557037 KRTAP5-2Q701N4 177 aa3.98□□□□□ -1.77
PSEN1-220ENST00000557037 UQCRQO14949 82 aa3.96□□□□□ -1.78
PSEN1-220ENST00000557037 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
PSEN1-220ENST00000557037 KRTAP13-4Q3LI77 160 aa3.94□□□□□ -1.78
PSEN1-220ENST00000557037 PYY3Q5JQD4 70 aa3.93□□□□□ -1.78
PSEN1-220ENST00000557037 LINC00208Q96KT6 92 aa3.93□□□□□ -1.78
PSEN1-220ENST00000557037 LCE3AQ5TA76 89 aa3.9□□□□□ -1.79
PSEN1-220ENST00000557037 M0R143 59 aa3.89□□□□□ -1.79
PSEN1-220ENST00000557037 DMAC1Q96GE9 116 aa3.88□□□□□ -1.79
PSEN1-220ENST00000557037 TAX1BP3O14907 124 aa3.87□□□□□ -1.79
PSEN1-220ENST00000557037 MT3P25713 68 aa3.87□□□□□ -1.79
PSEN1-220ENST00000557037 TRAV7A0A075B6U4 112 aa3.75□□□□□ -1.81
PSEN1-220ENST00000557037 MP68P56378 58 aa3.75□□□□□ -1.81
PSEN1-220ENST00000557037 SPINT4Q6UDR6 99 aa3.74□□□□□ -1.81
PSEN1-220ENST00000557037 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
PSEN1-220ENST00000557037 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
PSEN1-220ENST00000557037 SPTSSBQ8NFR3 76 aa3.73□□□□□ -1.81
PSEN1-220ENST00000557037 KRTAP5-1Q6L8H4 278 aa3.72□□□□□ -1.81
PSEN1-220ENST00000557037 HIST1H4AP62805 103 aaKnown RBP3.71□□□□□ -1.82
PSEN1-220ENST00000557037 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms