RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 HTN1P15515 57 aa2.62□□□□□ -1.99
ATXN3-227ENST00000554491 C15orf56Q8N910 161 aa2.62□□□□□ -1.99
ATXN3-227ENST00000554491 Q8NBF4 154 aa2.62□□□□□ -1.99
ATXN3-227ENST00000554491 LINC00472Q9H8W2 130 aa2.62□□□□□ -1.99
ATXN3-227ENST00000554491 IGLV5-48A0A075B6I7 105 aa2.61□□□□□ -1.99
ATXN3-227ENST00000554491 PANO1I0J062 215 aa2.61□□□□□ -1.99
ATXN3-227ENST00000554491 SRRM2Q9UQ35 2752 aaKnown RBP2.6□□□□□ -1.99
ATXN3-227ENST00000554491 IGLV6-57P01721 117 aa2.6□□□□□ -1.99
ATXN3-227ENST00000554491 SPINT4Q6UDR6 99 aa2.6□□□□□ -1.99
ATXN3-227ENST00000554491 VPS13BQ7Z7G8 4022 aa2.6□□□□□ -1.99
ATXN3-227ENST00000554491 K7EQZ3 153 aa2.59□□□□□ -1.99
ATXN3-227ENST00000554491 KRTAP1-4P0C5Y4 121 aa2.59□□□□□ -1.99
ATXN3-227ENST00000554491 TP53AIP1Q9HCN2 124 aa2.59□□□□□ -1.99
ATXN3-227ENST00000554491 NOP10Q9NPE3 64 aaKnown RBP2.59□□□□□ -1.99
ATXN3-227ENST00000554491 TOMM7Q9P0U1 55 aa2.59□□□□□ -1.99
ATXN3-227ENST00000554491 FAT1Q14517 4588 aa2.58□□□□□ -2
ATXN3-227ENST00000554491 A0A087WTM6 91 aa2.58□□□□□ -2
ATXN3-227ENST00000554491 GIG44P09565 113 aaPredicted RBP2.58□□□□□ -2
ATXN3-227ENST00000554491 ACYP2P14621 99 aa2.58□□□□□ -2
ATXN3-227ENST00000554491 PRO0255Q9UI72 69 aa2.58□□□□□ -2
ATXN3-227ENST00000554491 IGLV7-43P04211 117 aa2.57□□□□□ -2
ATXN3-227ENST00000554491 Q5VSD8 79 aa2.57□□□□□ -2
ATXN3-227ENST00000554491 Q8N377 158 aa2.57□□□□□ -2
ATXN3-227ENST00000554491 APLNQ9ULZ1 77 aa2.56□□□□□ -2
ATXN3-227ENST00000554491 FAT4Q6V0I7 4981 aa2.56□□□□□ -2
ATXN3-227ENST00000554491 GVQW2A0A096LPI5 108 aaPredicted RBP2.55□□□□□ -2
ATXN3-227ENST00000554491 ANGP03950 147 aaKnown RBP2.55□□□□□ -2
ATXN3-227ENST00000554491 WFDC13Q8IUB5 93 aa2.55□□□□□ -2
ATXN3-227ENST00000554491 MUC2Q02817 5179 aa2.54□□□□□ -2
ATXN3-227ENST00000554491 H3BNG1 76 aa2.54□□□□□ -2
ATXN3-227ENST00000554491 LINC00304Q8N9R0 145 aa2.54□□□□□ -2
ATXN3-227ENST00000554491 DEFB135Q30KP9 77 aa2.53□□□□□ -2
ATXN3-227ENST00000554491 LELP1Q5T871 98 aa2.53□□□□□ -2
ATXN3-227ENST00000554491 WFDC10BQ8IUB3 73 aa2.53□□□□□ -2
ATXN3-227ENST00000554491 Q96NJ1 140 aa2.53□□□□□ -2
ATXN3-227ENST00000554491 PKHD1L1Q86WI1 4243 aa2.53□□□□□ -2.01
ATXN3-227ENST00000554491 LRP2P98164 4655 aa2.53□□□□□ -2.01
ATXN3-227ENST00000554491 IGKV2-24A0A0C4DH68 120 aa2.52□□□□□ -2.01
ATXN3-227ENST00000554491 NBDYA0A0U1RRE5 68 aa2.52□□□□□ -2.01
ATXN3-227ENST00000554491 A0A1B0GU33 70 aa2.52□□□□□ -2.01
ATXN3-227ENST00000554491 SPART-AS1P0CW21 52 aa2.52□□□□□ -2.01
ATXN3-227ENST00000554491 DEFB130BP0DP73 79 aa2.52□□□□□ -2.01
ATXN3-227ENST00000554491 DEFB130AP0DP74 79 aa2.52□□□□□ -2.01
ATXN3-227ENST00000554491 KRTAP10-1P60331 282 aa2.52□□□□□ -2.01
ATXN3-227ENST00000554491 PCOTHQ58A44 107 aa2.52□□□□□ -2.01
ATXN3-227ENST00000554491 KRTAP11-1Q8IUC1 163 aa2.52□□□□□ -2.01
ATXN3-227ENST00000554491 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
ATXN3-227ENST00000554491 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
ATXN3-227ENST00000554491 ANAPC11Q9NYG5 84 aa2.51□□□□□ -2.01
ATXN3-227ENST00000554491 FAM168BA1KXE4 195 aa2.5□□□□□ -2.01
ATXN3-227ENST00000554491 DEFB116Q30KQ4 102 aa2.5□□□□□ -2.01
ATXN3-227ENST00000554491 C6orf48Q9UBA6 75 aa2.5□□□□□ -2.01
ATXN3-227ENST00000554491 LRP1Q07954 4544 aaKnown RBP2.49□□□□□ -2.01
ATXN3-227ENST00000554491 SSBP3-AS1Q7Z2R9 100 aa2.49□□□□□ -2.01
ATXN3-227ENST00000554491 UBE2DNLQ8IWF7 75 aa2.49□□□□□ -2.01
ATXN3-227ENST00000554491 FAT3Q8TDW7 4589 aa2.49□□□□□ -2.01
ATXN3-227ENST00000554491 A0A096LPF7 62 aa2.48□□□□□ -2.01
ATXN3-227ENST00000554491 A0A1W2PNN7 141 aa2.47□□□□□ -2.01
ATXN3-227ENST00000554491 DEFB4AO15263 64 aa2.47□□□□□ -2.01
ATXN3-227ENST00000554491 SMR3BP02814 79 aaPredicted RBP2.47□□□□□ -2.01
ATXN3-227ENST00000554491 UNQ6190/PRO20217Q6UXQ8 127 aa2.47□□□□□ -2.01
ATXN3-227ENST00000554491 A0A0G2JQZ4 141 aa2.46□□□□□ -2.02
ATXN3-227ENST00000554491 RPL37AP61513 92 aaKnown RBP2.46□□□□□ -2.02
ATXN3-227ENST00000554491 LINC01556Q5JQF7 62 aa2.46□□□□□ -2.02
ATXN3-227ENST00000554491 MMP24-AS1A0A0U1RRL7 71 aa2.45□□□□□ -2.02
ATXN3-227ENST00000554491 CLPSL2Q6UWE3 100 aa2.45□□□□□ -2.02
ATXN3-227ENST00000554491 TNXBP22105 4242 aa2.44□□□□□ -2.02
ATXN3-227ENST00000554491 DEFB105AQ8NG35 78 aa2.43□□□□□ -2.02
ATXN3-227ENST00000554491 PRO2289Q9P1D8 64 aa2.43□□□□□ -2.02
ATXN3-227ENST00000554491 HTN3P15516 51 aa2.42□□□□□ -2.02
ATXN3-227ENST00000554491 SPRR1AP35321 89 aa2.42□□□□□ -2.02
ATXN3-227ENST00000554491 TYMSOSQ8TAI1 123 aa2.41□□□□□ -2.02
ATXN3-227ENST00000554491 CRCT1Q9UGL9 99 aa2.41□□□□□ -2.02
ATXN3-227ENST00000554491 PSORS1C2Q9UIG4 136 aa2.41□□□□□ -2.02
ATXN3-227ENST00000554491 IGFL1Q6UW32 110 aa2.4□□□□□ -2.03
ATXN3-227ENST00000554491 Q6ZRX8 168 aa2.4□□□□□ -2.03
ATXN3-227ENST00000554491 MRPL34Q9BQ48 92 aaKnown RBP2.4□□□□□ -2.03
ATXN3-227ENST00000554491 DNAH8Q96JB1 4490 aa2.4□□□□□ -2.03
ATXN3-227ENST00000554491 TPRXLQ17RH7 258 aa2.39□□□□□ -2.03
ATXN3-227ENST00000554491 FSIP2Q5CZC0 6907 aa2.39□□□□□ -2.03
ATXN3-227ENST00000554491 H0YAA0 97 aa2.38□□□□□ -2.03
ATXN3-227ENST00000554491 COX6B2Q6YFQ2 88 aa2.38□□□□□ -2.03
ATXN3-227ENST00000554491 CRIPTQ9P021 101 aa2.38□□□□□ -2.03
ATXN3-227ENST00000554491 MT1HL1P0DM35 61 aa2.37□□□□□ -2.03
ATXN3-227ENST00000554491 KRTAP10-4P60372 401 aaPredicted RBP2.37□□□□□ -2.03
ATXN3-227ENST00000554491 Q6ZRN7 208 aaPredicted RBP2.37□□□□□ -2.03
ATXN3-227ENST00000554491 Q6ZSA8 131 aa2.37□□□□□ -2.03
ATXN3-227ENST00000554491 SPRR1BP22528 89 aa2.36□□□□□ -2.03
ATXN3-227ENST00000554491 PLAC4Q8WY50 150 aa2.35□□□□□ -2.03
ATXN3-227ENST00000554491 H1FX-AS1Q4G0G2 97 aa2.34□□□□□ -2.03
ATXN3-227ENST00000554491 R4GN34 69 aa2.34□□□□□ -2.03
ATXN3-227ENST00000554491 LPAP08519 4548 aa2.33□□□□□ -2.04
ATXN3-227ENST00000554491 INE1O15225 51 aa2.31□□□□□ -2.04
ATXN3-227ENST00000554491 A0A096LNI7 61 aa2.3□□□□□ -2.04
ATXN3-227ENST00000554491 SPACA4Q8TDM5 124 aa2.3□□□□□ -2.04
ATXN3-227ENST00000554491 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
ATXN3-227ENST00000554491 RPL37P61927 97 aaKnown RBP2.29□□□□□ -2.04
ATXN3-227ENST00000554491 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
ATXN3-227ENST00000554491 KRTAP13-1Q8IUC0 172 aa2.28□□□□□ -2.04
ATXN3-227ENST00000554491 PRLHP81277 87 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms