RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 PLECQ15149 4684 aaKnown RBP2.52□□□□□ -2.01
FOXN3-206ENST00000554005 SACSQ9NZJ4 4579 aa2.52□□□□□ -2.01
FOXN3-206ENST00000554005 LINC00158P58513 81 aa2.52□□□□□ -2.01
FOXN3-206ENST00000554005 C1orf137Q5JT78 98 aa2.51□□□□□ -2.01
FOXN3-206ENST00000554005 SPATA8Q6RVD6 105 aa2.51□□□□□ -2.01
FOXN3-206ENST00000554005 VPS13DQ5THJ4 4388 aa2.5□□□□□ -2.01
FOXN3-206ENST00000554005 A0A096LNI7 61 aa2.5□□□□□ -2.01
FOXN3-206ENST00000554005 IGKV2-24A0A0C4DH68 120 aa2.5□□□□□ -2.01
FOXN3-206ENST00000554005 H0Y9P7 68 aa2.5□□□□□ -2.01
FOXN3-206ENST00000554005 SPRR4Q96PI1 79 aa2.5□□□□□ -2.01
FOXN3-206ENST00000554005 EPPK1P58107 5090 aaKnown RBP2.49□□□□□ -2.01
FOXN3-206ENST00000554005 ETDCA0A1B0GVM5 59 aa2.49□□□□□ -2.01
FOXN3-206ENST00000554005 H3BPC8 53 aa2.49□□□□□ -2.01
FOXN3-206ENST00000554005 H3BQ85 93 aa2.49□□□□□ -2.01
FOXN3-206ENST00000554005 Q6ZSA8 131 aa2.49□□□□□ -2.01
FOXN3-206ENST00000554005 COA5Q86WW8 74 aa2.49□□□□□ -2.01
FOXN3-206ENST00000554005 SMIM11BQ8TCY0 68 aa2.49□□□□□ -2.01
FOXN3-206ENST00000554005 SPACA4Q8TDM5 124 aa2.49□□□□□ -2.01
FOXN3-206ENST00000554005 KCNQ1DNQ9H478 68 aa2.49□□□□□ -2.01
FOXN3-206ENST00000554005 A0A1W2PNN7 141 aa2.48□□□□□ -2.01
FOXN3-206ENST00000554005 FAT2Q9NYQ8 4349 aa2.47□□□□□ -2.01
FOXN3-206ENST00000554005 DMAC1Q96GE9 116 aa2.47□□□□□ -2.01
FOXN3-206ENST00000554005 PKHD1P08F94 4074 aa2.47□□□□□ -2.01
FOXN3-206ENST00000554005 BIRC6Q9NR09 4857 aa2.46□□□□□ -2.02
FOXN3-206ENST00000554005 IGLV6-57P01721 117 aa2.46□□□□□ -2.02
FOXN3-206ENST00000554005 R4GN34 69 aa2.46□□□□□ -2.02
FOXN3-206ENST00000554005 PKD1P98161 4303 aa2.45□□□□□ -2.02
FOXN3-206ENST00000554005 UQCR11O14957 56 aa2.45□□□□□ -2.02
FOXN3-206ENST00000554005 HRES1P13985 223 aa2.45□□□□□ -2.02
FOXN3-206ENST00000554005 DNAH2Q9P225 4427 aa2.45□□□□□ -2.02
FOXN3-206ENST00000554005 UBR4Q5T4S7 5183 aa2.44□□□□□ -2.02
FOXN3-206ENST00000554005 SPRR1AP35321 89 aa2.44□□□□□ -2.02
FOXN3-206ENST00000554005 DNAH10Q8IVF4 4471 aa2.43□□□□□ -2.02
FOXN3-206ENST00000554005 DNAH17Q9UFH2 4485 aa2.43□□□□□ -2.02
FOXN3-206ENST00000554005 A0A1B0GU33 70 aa2.42□□□□□ -2.02
FOXN3-206ENST00000554005 PSORS1C2Q9UIG4 136 aa2.42□□□□□ -2.02
FOXN3-206ENST00000554005 COX7BP24311 80 aa2.41□□□□□ -2.02
FOXN3-206ENST00000554005 Q6ZRX8 168 aa2.41□□□□□ -2.02
FOXN3-206ENST00000554005 KRTAP13-1Q8IUC0 172 aa2.41□□□□□ -2.02
FOXN3-206ENST00000554005 LINC00472Q9H8W2 130 aa2.41□□□□□ -2.02
FOXN3-206ENST00000554005 LINC00575Q6W349 94 aa2.4□□□□□ -2.03
FOXN3-206ENST00000554005 HERC2O95714 4834 aa2.4□□□□□ -2.03
FOXN3-206ENST00000554005 RPL37AP61513 92 aaKnown RBP2.39□□□□□ -2.03
FOXN3-206ENST00000554005 PRLHP81277 87 aa2.39□□□□□ -2.03
FOXN3-206ENST00000554005 PCLOQ9Y6V0 5065 aa2.39□□□□□ -2.03
FOXN3-206ENST00000554005 DNAH11Q96DT5 4516 aa2.38□□□□□ -2.03
FOXN3-206ENST00000554005 KIAA1109Q2LD37 5005 aa2.38□□□□□ -2.03
FOXN3-206ENST00000554005 SMR3BP02814 79 aaPredicted RBP2.38□□□□□ -2.03
FOXN3-206ENST00000554005 KRTAP10-4P60372 401 aaPredicted RBP2.38□□□□□ -2.03
FOXN3-206ENST00000554005 IGLV5-48A0A075B6I7 105 aa2.37□□□□□ -2.03
FOXN3-206ENST00000554005 SPRR1BP22528 89 aa2.37□□□□□ -2.03
FOXN3-206ENST00000554005 SPINK6Q6UWN8 80 aa2.37□□□□□ -2.03
FOXN3-206ENST00000554005 Q6ZQY7 126 aa2.37□□□□□ -2.03
FOXN3-206ENST00000554005 Q5VSD8 79 aa2.36□□□□□ -2.03
FOXN3-206ENST00000554005 RYR1P21817 5038 aa2.36□□□□□ -2.03
FOXN3-206ENST00000554005 HSPG2P98160 4391 aa2.36□□□□□ -2.03
FOXN3-206ENST00000554005 DNAH5Q8TE73 4624 aa2.35□□□□□ -2.03
FOXN3-206ENST00000554005 A0A1B0GU69 56 aa2.35□□□□□ -2.03
FOXN3-206ENST00000554005 DYNC1H1Q14204 4646 aaKnown RBP2.35□□□□□ -2.03
FOXN3-206ENST00000554005 LRP1BQ9NZR2 4599 aa2.35□□□□□ -2.03
FOXN3-206ENST00000554005 APOBP04114 4563 aaKnown RBP2.34□□□□□ -2.03
FOXN3-206ENST00000554005 DEFB105AQ8NG35 78 aa2.34□□□□□ -2.03
FOXN3-206ENST00000554005 Q96NJ1 140 aa2.34□□□□□ -2.03
FOXN3-206ENST00000554005 VPS13BQ7Z7G8 4022 aa2.33□□□□□ -2.04
FOXN3-206ENST00000554005 ABCA13Q86UQ4 5058 aa2.33□□□□□ -2.04
FOXN3-206ENST00000554005 KRTAP6-3Q3LI67 103 aa2.32□□□□□ -2.04
FOXN3-206ENST00000554005 DNAH8Q96JB1 4490 aa2.32□□□□□ -2.04
FOXN3-206ENST00000554005 SSBP3-AS1Q7Z2R9 100 aa2.31□□□□□ -2.04
FOXN3-206ENST00000554005 SRRM2Q9UQ35 2752 aaKnown RBP2.31□□□□□ -2.04
FOXN3-206ENST00000554005 K7EQZ3 153 aa2.29□□□□□ -2.04
FOXN3-206ENST00000554005 MT1HL1P0DM35 61 aa2.28□□□□□ -2.04
FOXN3-206ENST00000554005 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
FOXN3-206ENST00000554005 PRO2289Q9P1D8 64 aa2.28□□□□□ -2.04
FOXN3-206ENST00000554005 MYCBP2O75592 4640 aa2.28□□□□□ -2.04
FOXN3-206ENST00000554005 DMBT1Q9UGM3 2413 aaPredicted RBP2.28□□□□□ -2.04
FOXN3-206ENST00000554005 FAT1Q14517 4588 aa2.27□□□□□ -2.05
FOXN3-206ENST00000554005 FLG2Q5D862 2391 aaPredicted RBP2.27□□□□□ -2.05
FOXN3-206ENST00000554005 SPINK1P00995 79 aa2.27□□□□□ -2.05
FOXN3-206ENST00000554005 RPS29P62273 56 aaKnown RBP2.27□□□□□ -2.05
FOXN3-206ENST00000554005 PKHD1L1Q86WI1 4243 aa2.26□□□□□ -2.05
FOXN3-206ENST00000554005 A0A0G2JQZ4 141 aa2.26□□□□□ -2.05
FOXN3-206ENST00000554005 KRTAP12-3P60328 96 aa2.26□□□□□ -2.05
FOXN3-206ENST00000554005 ACYP2P14621 99 aa2.24□□□□□ -2.05
FOXN3-206ENST00000554005 WFDC13Q8IUB5 93 aa2.24□□□□□ -2.05
FOXN3-206ENST00000554005 TP53AIP1Q9HCN2 124 aa2.23□□□□□ -2.05
FOXN3-206ENST00000554005 TPRXLQ17RH7 258 aa2.22□□□□□ -2.05
FOXN3-206ENST00000554005 PCOTHQ58A44 107 aa2.22□□□□□ -2.05
FOXN3-206ENST00000554005 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
FOXN3-206ENST00000554005 HERC1Q15751 4861 aa2.19□□□□□ -2.06
FOXN3-206ENST00000554005 LRP1Q07954 4544 aaKnown RBP2.19□□□□□ -2.06
FOXN3-206ENST00000554005 FAT3Q8TDW7 4589 aa2.19□□□□□ -2.06
FOXN3-206ENST00000554005 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
FOXN3-206ENST00000554005 CRIPTQ9P021 101 aa2.18□□□□□ -2.06
FOXN3-206ENST00000554005 TNXBP22105 4242 aa2.18□□□□□ -2.06
FOXN3-206ENST00000554005 H0YAA0 97 aa2.17□□□□□ -2.06
FOXN3-206ENST00000554005 KRTAP12-4P60329 112 aa2.17□□□□□ -2.06
FOXN3-206ENST00000554005 MMP24-AS1A0A0U1RRL7 71 aa2.16□□□□□ -2.06
FOXN3-206ENST00000554005 MUC2Q02817 5179 aa2.16□□□□□ -2.06
FOXN3-206ENST00000554005 HMCN2Q8NDA2 5059 aa2.16□□□□□ -2.06
FOXN3-206ENST00000554005 C9orf92A6NGG3 77 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms