RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 SMCO4Q9NRQ5 59 aa-0.29□□□□□ -2.46
LSM6P2-201ENST00000552208 THOC2Q8NI27 1593 aaKnown RBP-0.29□□□□□ -2.46
LSM6P2-201ENST00000552208 MT1BP07438 61 aa-0.3□□□□□ -2.46
LSM6P2-201ENST00000552208 KRTAP8-1Q8IUC2 63 aa-0.3□□□□□ -2.46
LSM6P2-201ENST00000552208 PARP4Q9UKK3 1724 aaKnown RBP-0.3□□□□□ -2.46
LSM6P2-201ENST00000552208 KRTAP19-8Q3LI54 63 aa-0.31□□□□□ -2.46
LSM6P2-201ENST00000552208 UBL5Q9BZL1 73 aa-0.31□□□□□ -2.46
LSM6P2-201ENST00000552208 DNAH17Q9UFH2 4485 aa-0.31□□□□□ -2.46
LSM6P2-201ENST00000552208 ASXL1Q8IXJ9 1541 aa-0.32□□□□□ -2.46
LSM6P2-201ENST00000552208 DUOX2Q9NRD8 1548 aa-0.32□□□□□ -2.46
LSM6P2-201ENST00000552208 MRPL33O75394 65 aaKnown RBP-0.32□□□□□ -2.46
LSM6P2-201ENST00000552208 DEFB130BP0DP73 79 aa-0.32□□□□□ -2.46
LSM6P2-201ENST00000552208 DEFB130AP0DP74 79 aa-0.32□□□□□ -2.46
LSM6P2-201ENST00000552208 DNAH11Q96DT5 4516 aa-0.32□□□□□ -2.46
LSM6P2-201ENST00000552208 ITSN1Q15811 1721 aa-0.33□□□□□ -2.46
LSM6P2-201ENST00000552208 PDCD5O14737 125 aa-0.33□□□□□ -2.46
LSM6P2-201ENST00000552208 IAPPP10997 89 aa-0.33□□□□□ -2.46
LSM6P2-201ENST00000552208 ZC3H13Q5T200 1668 aaKnown RBP-0.33□□□□□ -2.46
LSM6P2-201ENST00000552208 DNAH8Q96JB1 4490 aa-0.34□□□□□ -2.46
LSM6P2-201ENST00000552208 CRIP1P50238 77 aa-0.34□□□□□ -2.46
LSM6P2-201ENST00000552208 HILPDAQ9Y5L2 63 aa-0.34□□□□□ -2.46
LSM6P2-201ENST00000552208 INO80Q9ULG1 1556 aaPredicted RBP-0.35□□□□□ -2.47
LSM6P2-201ENST00000552208 DNAH2Q9P225 4427 aa-0.35□□□□□ -2.47
LSM6P2-201ENST00000552208 EEA1Q15075 1411 aa-0.36□□□□□ -2.47
LSM6P2-201ENST00000552208 ATXN8Q156A1 80 aa-0.36□□□□□ -2.47
LSM6P2-201ENST00000552208 ABCA9Q8IUA7 1624 aa-0.37□□□□□ -2.47
LSM6P2-201ENST00000552208 NRAPQ86VF7 1730 aa-0.37□□□□□ -2.47
LSM6P2-201ENST00000552208 MT1FP04733 61 aa-0.37□□□□□ -2.47
LSM6P2-201ENST00000552208 KRTAP19-2Q3LHN2 52 aa-0.37□□□□□ -2.47
LSM6P2-201ENST00000552208 NHSQ6T4R5 1651 aa-0.37□□□□□ -2.47
LSM6P2-201ENST00000552208 ETDCA0A1B0GVM5 59 aa-0.38□□□□□ -2.47
LSM6P2-201ENST00000552208 MT1HL1P0DM35 61 aa-0.38□□□□□ -2.47
LSM6P2-201ENST00000552208 PRLHP81277 87 aa-0.39□□□□□ -2.47
LSM6P2-201ENST00000552208 MT2AP02795 61 aa-0.4□□□□□ -2.47
LSM6P2-201ENST00000552208 DEFB114Q30KQ6 69 aa-0.4□□□□□ -2.47
LSM6P2-201ENST00000552208 DEFB104AQ8WTQ1 72 aa-0.41□□□□□ -2.48
LSM6P2-201ENST00000552208 C9orf92A6NGG3 77 aa-0.44□□□□□ -2.48
LSM6P2-201ENST00000552208 DNMBPQ6XZF7 1577 aa-0.45□□□□□ -2.48
LSM6P2-201ENST00000552208 UGGT1Q9NYU2 1555 aa-0.45□□□□□ -2.48
LSM6P2-201ENST00000552208 PREX2Q70Z35 1606 aa-0.45□□□□□ -2.48
LSM6P2-201ENST00000552208 ITSN2Q9NZM3 1697 aa-0.45□□□□□ -2.48
LSM6P2-201ENST00000552208 H3BNG1 76 aa-0.45□□□□□ -2.48
LSM6P2-201ENST00000552208 MT1GP13640 62 aa-0.45□□□□□ -2.48
LSM6P2-201ENST00000552208 MT1MQ8N339 61 aa-0.45□□□□□ -2.48
LSM6P2-201ENST00000552208 S4R3F8 94 aa-0.45□□□□□ -2.48
LSM6P2-201ENST00000552208 GNG13Q9P2W3 67 aa-0.46□□□□□ -2.48
LSM6P2-201ENST00000552208 MADDQ8WXG6 1647 aa-0.46□□□□□ -2.48
LSM6P2-201ENST00000552208 C3P01024 1663 aa-0.46□□□□□ -2.48
LSM6P2-201ENST00000552208 MT1AP04731 61 aa-0.47□□□□□ -2.48
LSM6P2-201ENST00000552208 ABCC6O95255 1503 aa-0.48□□□□□ -2.49
LSM6P2-201ENST00000552208 DEFB106AQ8N104 65 aa-0.48□□□□□ -2.49
LSM6P2-201ENST00000552208 EFCAB5A4FU69 1503 aa-0.48□□□□□ -2.49
LSM6P2-201ENST00000552208 RPS27P42677 84 aaKnown RBP-0.49□□□□□ -2.49
LSM6P2-201ENST00000552208 RPS27LQ71UM5 84 aaKnown RBP-0.49□□□□□ -2.49
LSM6P2-201ENST00000552208 CPS1P31327 1500 aa-0.49□□□□□ -2.49
LSM6P2-201ENST00000552208 MT1EP04732 61 aa-0.51□□□□□ -2.49
LSM6P2-201ENST00000552208 WT1-ASQ06250 92 aa-0.51□□□□□ -2.49
LSM6P2-201ENST00000552208 MINOS1Q5TGZ0 78 aa-0.51□□□□□ -2.49
LSM6P2-201ENST00000552208 NRXN3Q9Y4C0 1643 aa-0.51□□□□□ -2.49
LSM6P2-201ENST00000552208 NFAT5O94916 1531 aa-0.52□□□□□ -2.49
LSM6P2-201ENST00000552208 LY75O60449 1722 aa-0.52□□□□□ -2.49
LSM6P2-201ENST00000552208 CROCC2H7BZ55 1655 aa-0.53□□□□□ -2.49
LSM6P2-201ENST00000552208 LINC01549A6NIU2 74 aa-0.53□□□□□ -2.49
LSM6P2-201ENST00000552208 MROH1Q8NDA8 1641 aa-0.53□□□□□ -2.49
LSM6P2-201ENST00000552208 KIF1AQ12756 1690 aa-0.55□□□□□ -2.5
LSM6P2-201ENST00000552208 MT1XP80297 61 aa-0.55□□□□□ -2.5
LSM6P2-201ENST00000552208 ABCA6Q8N139 1617 aa-0.56□□□□□ -2.5
LSM6P2-201ENST00000552208 MAST1Q9Y2H9 1570 aa-0.57□□□□□ -2.5
LSM6P2-201ENST00000552208 NCBP2-AS2Q69YL0 99 aa-0.57□□□□□ -2.5
LSM6P2-201ENST00000552208 C6orf48Q9UBA6 75 aa-0.57□□□□□ -2.5
LSM6P2-201ENST00000552208 KIF21BO75037 1637 aa-0.57□□□□□ -2.5
LSM6P2-201ENST00000552208 A0A087WWC5 75 aa-0.58□□□□□ -2.5
LSM6P2-201ENST00000552208 DEFB124Q8NES8 71 aa-0.58□□□□□ -2.5
LSM6P2-201ENST00000552208 MT1LQ93083 61 aa-0.58□□□□□ -2.5
LSM6P2-201ENST00000552208 TIAM1Q13009 1591 aa-0.58□□□□□ -2.5
LSM6P2-201ENST00000552208 ANKRD36CQ5JPF3 1778 aa-0.6□□□□□ -2.5
LSM6P2-201ENST00000552208 ADCY10Q96PN6 1610 aa-0.6□□□□□ -2.51
LSM6P2-201ENST00000552208 TOGARAM1Q9Y4F4 1720 aa-0.61□□□□□ -2.51
LSM6P2-201ENST00000552208 K7EMI3 77 aa-0.62□□□□□ -2.51
LSM6P2-201ENST00000552208 GLI2P10070 1586 aa-0.62□□□□□ -2.51
LSM6P2-201ENST00000552208 FCER1GP30273 86 aa-0.63□□□□□ -2.51
LSM6P2-201ENST00000552208 RPS29P62273 56 aaKnown RBP-0.63□□□□□ -2.51
LSM6P2-201ENST00000552208 CCDC180Q9P1Z9 1646 aa-0.64□□□□□ -2.51
LSM6P2-201ENST00000552208 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.64□□□□□ -2.51
LSM6P2-201ENST00000552208 IGLV5-48A0A075B6I7 105 aa-0.66□□□□□ -2.52
LSM6P2-201ENST00000552208 IQGAP1P46940 1657 aa-0.66□□□□□ -2.52
LSM6P2-201ENST00000552208 ALS2Q96Q42 1657 aa-0.66□□□□□ -2.52
LSM6P2-201ENST00000552208 M0R1W7 72 aa-0.67□□□□□ -2.52
LSM6P2-201ENST00000552208 SFTA3P0C7M3 94 aa-0.67□□□□□ -2.52
LSM6P2-201ENST00000552208 H3BUA1 57 aa-0.68□□□□□ -2.52
LSM6P2-201ENST00000552208 KRTAP19-5Q3LI72 72 aa-0.68□□□□□ -2.52
LSM6P2-201ENST00000552208 AGLP35573 1532 aa-0.69□□□□□ -2.52
LSM6P2-201ENST00000552208 MROH2BQ7Z745 1585 aa-0.7□□□□□ -2.52
LSM6P2-201ENST00000552208 DEFB110Q30KQ9 67 aa-0.7□□□□□ -2.52
LSM6P2-201ENST00000552208 CDC42BPAQ5VT25 1732 aa-0.71□□□□□ -2.52
LSM6P2-201ENST00000552208 SMIM31A0A1B0GVY4 71 aa-0.71□□□□□ -2.52
LSM6P2-201ENST00000552208 IGIPA6NJ69 53 aa-0.71□□□□□ -2.52
LSM6P2-201ENST00000552208 CLTCL1P53675 1640 aa-0.72□□□□□ -2.52
LSM6P2-201ENST00000552208 DEFB4AO15263 64 aa-0.73□□□□□ -2.53
LSM6P2-201ENST00000552208 LMO7Q8WWI1 1683 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms