RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 IFITM1P13164 125 aa0.86□□□□□ -2.27
SNHG1-224ENST00000545688 SNHG12Q9BXW3 62 aa0.86□□□□□ -2.27
SNHG1-224ENST00000545688 HSBP1L1C9JCN9 74 aa0.85□□□□□ -2.27
SNHG1-224ENST00000545688 HSBP1O75506 76 aa0.85□□□□□ -2.27
SNHG1-224ENST00000545688 TRGC2P03986 189 aa0.85□□□□□ -2.27
SNHG1-224ENST00000545688 PMCHL2Q9BQD1 86 aa0.85□□□□□ -2.27
SNHG1-224ENST00000545688 TTTY13Q9BZ97 58 aa0.85□□□□□ -2.27
SNHG1-224ENST00000545688 HSPB8Q9UJY1 196 aa0.85□□□□□ -2.27
SNHG1-224ENST00000545688 TSTD3H0UI37 97 aa0.84□□□□□ -2.27
SNHG1-224ENST00000545688 H0YAA0 97 aa0.84□□□□□ -2.27
SNHG1-224ENST00000545688 H3BMG7 143 aa0.84□□□□□ -2.27
SNHG1-224ENST00000545688 LEPROTL1O95214 131 aa0.84□□□□□ -2.27
SNHG1-224ENST00000545688 VAMP3Q15836 100 aa0.84□□□□□ -2.27
SNHG1-224ENST00000545688 C4orf26Q17RF5 130 aa0.84□□□□□ -2.27
SNHG1-224ENST00000545688 C2orf91Q6ZV80 131 aa0.84□□□□□ -2.27
SNHG1-224ENST00000545688 MUSTN1Q8IVN3 82 aa0.84□□□□□ -2.27
SNHG1-224ENST00000545688 MT1MQ8N339 61 aa0.84□□□□□ -2.27
SNHG1-224ENST00000545688 YPEL4Q96NS1 127 aa0.84□□□□□ -2.27
SNHG1-224ENST00000545688 DSCR8Q96T75 97 aa0.84□□□□□ -2.27
SNHG1-224ENST00000545688 S4R3F8 94 aa0.84□□□□□ -2.27
SNHG1-224ENST00000545688 HIST1H2BKO60814 126 aa0.83□□□□□ -2.28
SNHG1-224ENST00000545688 SNCGO76070 127 aa0.83□□□□□ -2.28
SNHG1-224ENST00000545688 HIST1H2BJP06899 126 aa0.83□□□□□ -2.28
SNHG1-224ENST00000545688 FABP4P15090 132 aa0.83□□□□□ -2.28
SNHG1-224ENST00000545688 HIST1H2BOP23527 126 aa0.83□□□□□ -2.28
SNHG1-224ENST00000545688 HIST1H2BBP33778 126 aa0.83□□□□□ -2.28
SNHG1-224ENST00000545688 HIST1H2BDP58876 126 aa0.83□□□□□ -2.28
SNHG1-224ENST00000545688 KRTDAPP60985 99 aa0.83□□□□□ -2.28
SNHG1-224ENST00000545688 HIST1H2BCP62807 126 aa0.83□□□□□ -2.28
SNHG1-224ENST00000545688 HIST2H2BEQ16778 126 aa0.83□□□□□ -2.28
SNHG1-224ENST00000545688 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.83□□□□□ -2.28
SNHG1-224ENST00000545688 C7orf65Q6ZTY9 151 aa0.83□□□□□ -2.28
SNHG1-224ENST00000545688 PLAC4Q8WY50 150 aa0.83□□□□□ -2.28
SNHG1-224ENST00000545688 HIST1H2BHQ93079 126 aa0.83□□□□□ -2.28
SNHG1-224ENST00000545688 HIST1H2BNQ99877 126 aa0.83□□□□□ -2.28
SNHG1-224ENST00000545688 HIST1H2BMQ99879 126 aa0.83□□□□□ -2.28
SNHG1-224ENST00000545688 A8MUN3 132 aa0.82□□□□□ -2.28
SNHG1-224ENST00000545688 J3KT08 172 aa0.82□□□□□ -2.28
SNHG1-224ENST00000545688 K7EQZ3 153 aa0.82□□□□□ -2.28
SNHG1-224ENST00000545688 K7ERS5 55 aa0.82□□□□□ -2.28
SNHG1-224ENST00000545688 M0R143 59 aa0.82□□□□□ -2.28
SNHG1-224ENST00000545688 SMIM6P0DI80 62 aa0.82□□□□□ -2.28
SNHG1-224ENST00000545688 BVES-AS1Q5T3Y7 98 aa0.82□□□□□ -2.28
SNHG1-224ENST00000545688 LINC01545Q5VT33 79 aa0.82□□□□□ -2.28
SNHG1-224ENST00000545688 COPS9Q8WXC6 57 aa0.82□□□□□ -2.28
SNHG1-224ENST00000545688 C12orf57Q99622 126 aa0.82□□□□□ -2.28
SNHG1-224ENST00000545688 HIST1H2BLQ99880 126 aa0.82□□□□□ -2.28
SNHG1-224ENST00000545688 VAMP8Q9BV40 100 aa0.82□□□□□ -2.28
SNHG1-224ENST00000545688 A0A087WVE0 104 aa0.81□□□□□ -2.28
SNHG1-224ENST00000545688 LOC105371267A0A1B0GV96 52 aa0.81□□□□□ -2.28
SNHG1-224ENST00000545688 SYS1-DBNDD2H3BUS1 97 aa0.81□□□□□ -2.28
SNHG1-224ENST00000545688 CCKP06307 115 aa0.81□□□□□ -2.28
SNHG1-224ENST00000545688 COX6CP09669 75 aa0.81□□□□□ -2.28
SNHG1-224ENST00000545688 SCGB1D4Q6XE38 83 aa0.81□□□□□ -2.28
SNHG1-224ENST00000545688 HIST3H2BBQ8N257 126 aa0.81□□□□□ -2.28
SNHG1-224ENST00000545688 ANKRD29Q8N6D5 301 aa0.81□□□□□ -2.28
SNHG1-224ENST00000545688 TMEM254Q8TBM7 123 aa0.81□□□□□ -2.28
SNHG1-224ENST00000545688 MRPL34Q9BQ48 92 aaKnown RBP0.81□□□□□ -2.28
SNHG1-224ENST00000545688 UQCR10Q9UDW1 63 aa0.81□□□□□ -2.28
SNHG1-224ENST00000545688 MMP24-AS1A0A0U1RRL7 71 aa0.8□□□□□ -2.28
SNHG1-224ENST00000545688 A0A1B0GX51 115 aa0.8□□□□□ -2.28
SNHG1-224ENST00000545688 H0YGX0 51 aa0.8□□□□□ -2.28
SNHG1-224ENST00000545688 DLEU1O43261 78 aa0.8□□□□□ -2.28
SNHG1-224ENST00000545688 TRACP01848 142 aa0.8□□□□□ -2.28
SNHG1-224ENST00000545688 SCGB1C2P0DMR2 95 aa0.8□□□□□ -2.28
SNHG1-224ENST00000545688 BATFQ16520 125 aa0.8□□□□□ -2.28
SNHG1-224ENST00000545688 SPATA45Q537H7 98 aa0.8□□□□□ -2.28
SNHG1-224ENST00000545688 COL5A1-AS1Q5SY13 56 aa0.8□□□□□ -2.28
SNHG1-224ENST00000545688 LYRM7Q5U5X0 104 aa0.8□□□□□ -2.28
SNHG1-224ENST00000545688 Q6ZQT0 140 aa0.8□□□□□ -2.28
SNHG1-224ENST00000545688 MT1LQ93083 61 aa0.8□□□□□ -2.28
SNHG1-224ENST00000545688 C14orf144Q96I85 54 aa0.8□□□□□ -2.28
SNHG1-224ENST00000545688 NDUFB1O75438 58 aa0.79□□□□□ -2.28
SNHG1-224ENST00000545688 COX8AP10176 69 aa0.79□□□□□ -2.28
SNHG1-224ENST00000545688 PDE6GP18545 87 aa0.79□□□□□ -2.28
SNHG1-224ENST00000545688 PSMB2P49721 201 aa0.79□□□□□ -2.28
SNHG1-224ENST00000545688 PYY3Q5JQD4 70 aa0.79□□□□□ -2.28
SNHG1-224ENST00000545688 GTF2H5Q6ZYL4 71 aa0.79□□□□□ -2.28
SNHG1-224ENST00000545688 ATOH7Q8N100 152 aa0.79□□□□□ -2.28
SNHG1-224ENST00000545688 HIGD1BQ9P298 99 aa0.79□□□□□ -2.28
SNHG1-224ENST00000545688 J3QR89 54 aa0.78□□□□□ -2.28
SNHG1-224ENST00000545688 FABP2P12104 132 aa0.78□□□□□ -2.28
SNHG1-224ENST00000545688 HSD52Q0P140 79 aa0.78□□□□□ -2.28
SNHG1-224ENST00000545688 KRTAP19-5Q3LI72 72 aa0.78□□□□□ -2.28
SNHG1-224ENST00000545688 PRO1854Q9UHT4 67 aa0.78□□□□□ -2.28
SNHG1-224ENST00000545688 A0A1B0GW54 56 aa0.77□□□□□ -2.29
SNHG1-224ENST00000545688 hDV103S1A0JD37 113 aa0.77□□□□□ -2.29
SNHG1-224ENST00000545688 F8W1H4 67 aa0.77□□□□□ -2.29
SNHG1-224ENST00000545688 K7ERU9 68 aa0.77□□□□□ -2.29
SNHG1-224ENST00000545688 ATXN8Q156A1 80 aa0.77□□□□□ -2.29
SNHG1-224ENST00000545688 TMEM256-PLSCR3K7ERE1 68 aa0.76□□□□□ -2.29
SNHG1-224ENST00000545688 DNAL4O96015 105 aa0.76□□□□□ -2.29
SNHG1-224ENST00000545688 BAALC-AS2P0C853 105 aa0.76□□□□□ -2.29
SNHG1-224ENST00000545688 SPCS1Q9Y6A9 102 aa0.76□□□□□ -2.29
SNHG1-224ENST00000545688 A0A1B0GV90 55 aa0.75□□□□□ -2.29
SNHG1-224ENST00000545688 A0A1W2PPM0 123 aa0.75□□□□□ -2.29
SNHG1-224ENST00000545688 JMJD7-PLA2G4BH0Y9G9 81 aa0.75□□□□□ -2.29
SNHG1-224ENST00000545688 TAX1BP3O14907 124 aa0.75□□□□□ -2.29
SNHG1-224ENST00000545688 ACYP1P07311 99 aa0.75□□□□□ -2.29
SNHG1-224ENST00000545688 FXYD2P54710 66 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms