RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 DNAH7Q8WXX0 4024 aa2.26□□□□□ -2.05
SNHG1-219ENST00000542112 PRKDCP78527 4128 aaKnown RBP2.25□□□□□ -2.05
SNHG1-219ENST00000542112 PP632Q6XCG6 107 aa2.25□□□□□ -2.05
SNHG1-219ENST00000542112 UBE2DNLQ8IWF7 75 aa2.25□□□□□ -2.05
SNHG1-219ENST00000542112 DEFB4AO15263 64 aa2.24□□□□□ -2.05
SNHG1-219ENST00000542112 LCE1FQ5T754 118 aa2.24□□□□□ -2.05
SNHG1-219ENST00000542112 SPINK6Q6UWN8 80 aa2.24□□□□□ -2.05
SNHG1-219ENST00000542112 C10orf95Q9H7T3 257 aa2.23□□□□□ -2.05
SNHG1-219ENST00000542112 R4GN34 69 aa2.23□□□□□ -2.05
SNHG1-219ENST00000542112 S4R3F8 94 aa2.23□□□□□ -2.05
SNHG1-219ENST00000542112 CSMD3Q7Z407 3707 aa2.23□□□□□ -2.05
SNHG1-219ENST00000542112 DNAH6Q9C0G6 4158 aa2.23□□□□□ -2.05
SNHG1-219ENST00000542112 DNAH1Q9P2D7 4330 aa2.23□□□□□ -2.05
SNHG1-219ENST00000542112 VPS13DQ5THJ4 4388 aa2.22□□□□□ -2.05
SNHG1-219ENST00000542112 KRTAP21-3Q3LHN1 58 aa2.22□□□□□ -2.05
SNHG1-219ENST00000542112 FLG2Q5D862 2391 aaPredicted RBP2.21□□□□□ -2.06
SNHG1-219ENST00000542112 PLECQ15149 4684 aaKnown RBP2.21□□□□□ -2.06
SNHG1-219ENST00000542112 KRTAP12-2P59991 146 aa2.2□□□□□ -2.06
SNHG1-219ENST00000542112 SPACA4Q8TDM5 124 aa2.2□□□□□ -2.06
SNHG1-219ENST00000542112 APLNQ9ULZ1 77 aa2.19□□□□□ -2.06
SNHG1-219ENST00000542112 STARD9Q9P2P6 4700 aa2.19□□□□□ -2.06
SNHG1-219ENST00000542112 DNHD1Q96M86 4753 aa2.19□□□□□ -2.06
SNHG1-219ENST00000542112 M0QZ58 72 aa2.18□□□□□ -2.06
SNHG1-219ENST00000542112 DNAH17Q9UFH2 4485 aa2.18□□□□□ -2.06
SNHG1-219ENST00000542112 TGP01266 2768 aa2.17□□□□□ -2.06
SNHG1-219ENST00000542112 KRTAP10-6P60371 365 aaPredicted RBP2.17□□□□□ -2.06
SNHG1-219ENST00000542112 KRTAP10-12P60413 245 aa2.17□□□□□ -2.06
SNHG1-219ENST00000542112 RPS29P62273 56 aaKnown RBP2.17□□□□□ -2.06
SNHG1-219ENST00000542112 DNAH2Q9P225 4427 aa2.17□□□□□ -2.06
SNHG1-219ENST00000542112 FBN3Q75N90 2809 aa2.17□□□□□ -2.06
SNHG1-219ENST00000542112 MEGF8Q7Z7M0 2845 aa2.17□□□□□ -2.06
SNHG1-219ENST00000542112 DNAH10Q8IVF4 4471 aa2.17□□□□□ -2.06
SNHG1-219ENST00000542112 LYSTQ99698 3801 aa2.16□□□□□ -2.06
SNHG1-219ENST00000542112 KMT2AQ03164 3969 aa2.15□□□□□ -2.07
SNHG1-219ENST00000542112 HECTD4Q9Y4D8 3996 aa2.15□□□□□ -2.07
SNHG1-219ENST00000542112 SPRR5A0A1B0GTR4 108 aa2.14□□□□□ -2.07
SNHG1-219ENST00000542112 KRTAP12-1P59990 96 aa2.14□□□□□ -2.07
SNHG1-219ENST00000542112 FRAS1Q86XX4 4008 aa2.14□□□□□ -2.07
SNHG1-219ENST00000542112 DNAH8Q96JB1 4490 aa2.13□□□□□ -2.07
SNHG1-219ENST00000542112 A0A0D9SG42 100 aa2.13□□□□□ -2.07
SNHG1-219ENST00000542112 KRTAP1-4P0C5Y4 121 aa2.12□□□□□ -2.07
SNHG1-219ENST00000542112 KRTAP13-4Q3LI77 160 aa2.12□□□□□ -2.07
SNHG1-219ENST00000542112 DNAH11Q96DT5 4516 aa2.12□□□□□ -2.07
SNHG1-219ENST00000542112 A0A1B0GVY2 172 aa2.1□□□□□ -2.07
SNHG1-219ENST00000542112 DNAH5Q8TE73 4624 aa2.1□□□□□ -2.07
SNHG1-219ENST00000542112 SACSQ9NZJ4 4579 aa2.09□□□□□ -2.07
SNHG1-219ENST00000542112 PKD1P98161 4303 aa2.09□□□□□ -2.07
SNHG1-219ENST00000542112 LCE3CQ5T5A8 94 aa2.08□□□□□ -2.08
SNHG1-219ENST00000542112 Q5VSD8 79 aa2.08□□□□□ -2.08
SNHG1-219ENST00000542112 FAT2Q9NYQ8 4349 aa2.08□□□□□ -2.08
SNHG1-219ENST00000542112 HYDINQ4G0P3 5121 aa2.07□□□□□ -2.08
SNHG1-219ENST00000542112 LCE1EQ5T753 118 aa2.07□□□□□ -2.08
SNHG1-219ENST00000542112 KRTAP10-5P60370 271 aa2.05□□□□□ -2.08
SNHG1-219ENST00000542112 KRTAP10-7P60409 375 aaPredicted RBP2.05□□□□□ -2.08
SNHG1-219ENST00000542112 DYNC1H1Q14204 4646 aaKnown RBP2.03□□□□□ -2.08
SNHG1-219ENST00000542112 SRRM2Q9UQ35 2752 aaKnown RBP2.02□□□□□ -2.09
SNHG1-219ENST00000542112 KRTAP13-2Q52LG2 175 aa2.02□□□□□ -2.09
SNHG1-219ENST00000542112 LRP1BQ9NZR2 4599 aa2.02□□□□□ -2.09
SNHG1-219ENST00000542112 PKHD1L1Q86WI1 4243 aa2.01□□□□□ -2.09
SNHG1-219ENST00000542112 RYR2Q92736 4967 aa2.01□□□□□ -2.09
SNHG1-219ENST00000542112 KRTAP10-8P60410 259 aa2□□□□□ -2.09
SNHG1-219ENST00000542112 KRTAP10-1P60331 282 aa1.99□□□□□ -2.09
SNHG1-219ENST00000542112 APOBP04114 4563 aaKnown RBP1.99□□□□□ -2.09
SNHG1-219ENST00000542112 PKHD1P08F94 4074 aa1.99□□□□□ -2.09
SNHG1-219ENST00000542112 VPS13BQ7Z7G8 4022 aa1.99□□□□□ -2.09
SNHG1-219ENST00000542112 KMT2CQ8NEZ4 4911 aaKnown RBP1.97□□□□□ -2.09
SNHG1-219ENST00000542112 KRTAP10-4P60372 401 aaPredicted RBP1.96□□□□□ -2.1
SNHG1-219ENST00000542112 FAT1Q14517 4588 aa1.94□□□□□ -2.1
SNHG1-219ENST00000542112 TNP1P09430 55 aa1.93□□□□□ -2.1
SNHG1-219ENST00000542112 HSPG2P98160 4391 aa1.93□□□□□ -2.1
SNHG1-219ENST00000542112 RYR3Q15413 4870 aa1.92□□□□□ -2.1
SNHG1-219ENST00000542112 C9orf92A6NGG3 77 aa1.92□□□□□ -2.1
SNHG1-219ENST00000542112 RYR1P21817 5038 aa1.91□□□□□ -2.1
SNHG1-219ENST00000542112 FAT3Q8TDW7 4589 aa1.9□□□□□ -2.1
SNHG1-219ENST00000542112 TNXBP22105 4242 aa1.9□□□□□ -2.11
SNHG1-219ENST00000542112 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.11
SNHG1-219ENST00000542112 DMBT1Q9UGM3 2413 aaPredicted RBP1.9□□□□□ -2.11
SNHG1-219ENST00000542112 LCE3EQ5T5B0 92 aa1.89□□□□□ -2.11
SNHG1-219ENST00000542112 MYCBP2O75592 4640 aa1.88□□□□□ -2.11
SNHG1-219ENST00000542112 LRP1Q07954 4544 aaKnown RBP1.88□□□□□ -2.11
SNHG1-219ENST00000542112 KIAA1109Q2LD37 5005 aa1.87□□□□□ -2.11
SNHG1-219ENST00000542112 KRTAP9-6A8MVA2 160 aa1.87□□□□□ -2.11
SNHG1-219ENST00000542112 SMR3BP02814 79 aaPredicted RBP1.87□□□□□ -2.11
SNHG1-219ENST00000542112 EPPK1P58107 5090 aaKnown RBP1.86□□□□□ -2.11
SNHG1-219ENST00000542112 MT1HL1P0DM35 61 aa1.83□□□□□ -2.12
SNHG1-219ENST00000542112 BIRC6Q9NR09 4857 aa1.82□□□□□ -2.12
SNHG1-219ENST00000542112 HERC2O95714 4834 aa1.8□□□□□ -2.12
SNHG1-219ENST00000542112 KRTAP10-10P60014 251 aa1.8□□□□□ -2.12
SNHG1-219ENST00000542112 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
SNHG1-219ENST00000542112 ABCA13Q86UQ4 5058 aa1.78□□□□□ -2.12
SNHG1-219ENST00000542112 MUC17Q685J3 4493 aa1.74□□□□□ -2.13
SNHG1-219ENST00000542112 LRP2P98164 4655 aa1.73□□□□□ -2.13
SNHG1-219ENST00000542112 KRTAP8-1Q8IUC2 63 aa1.72□□□□□ -2.13
SNHG1-219ENST00000542112 LPAP08519 4548 aa1.71□□□□□ -2.14
SNHG1-219ENST00000542112 PCLOQ9Y6V0 5065 aa1.69□□□□□ -2.14
SNHG1-219ENST00000542112 HERC1Q15751 4861 aa1.69□□□□□ -2.14
SNHG1-219ENST00000542112 KRTAP19-2Q3LHN2 52 aa1.68□□□□□ -2.14
SNHG1-219ENST00000542112 KRTAP4-1Q9BYQ7 146 aa1.68□□□□□ -2.14
SNHG1-219ENST00000542112 FLGP20930 4061 aaPredicted RBP1.66□□□□□ -2.14
SNHG1-219ENST00000542112 KRTAP5-9P26371 169 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms