RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 COL6A5A8TX70 2615 aa3.14□□□□□ -1.91
VPS33A-203ENST00000536212 NBEAL1Q6ZS30 2694 aa3.14□□□□□ -1.91
VPS33A-203ENST00000536212 MGAM2Q2M2H8 2515 aa3.14□□□□□ -1.91
VPS33A-203ENST00000536212 ADM2Q7Z4H4 148 aa3.14□□□□□ -1.91
VPS33A-203ENST00000536212 TENM2Q9NT68 2774 aa3.14□□□□□ -1.91
VPS33A-203ENST00000536212 DNAH6Q9C0G6 4158 aa3.13□□□□□ -1.91
VPS33A-203ENST00000536212 STARD9Q9P2P6 4700 aa3.13□□□□□ -1.91
VPS33A-203ENST00000536212 LINC00304Q8N9R0 145 aa3.13□□□□□ -1.91
VPS33A-203ENST00000536212 LYSTQ99698 3801 aa3.12□□□□□ -1.91
VPS33A-203ENST00000536212 DNAH2Q9P225 4427 aa3.12□□□□□ -1.91
VPS33A-203ENST00000536212 DNAH7Q8WXX0 4024 aa3.12□□□□□ -1.91
VPS33A-203ENST00000536212 A8MUU9 505 aa3.12□□□□□ -1.91
VPS33A-203ENST00000536212 LUZP6Q538Z0 58 aa3.12□□□□□ -1.91
VPS33A-203ENST00000536212 C20orf166-AS1Q96NR2 134 aa3.12□□□□□ -1.91
VPS33A-203ENST00000536212 PRKDCP78527 4128 aaKnown RBP3.12□□□□□ -1.91
VPS33A-203ENST00000536212 MT3P25713 68 aa3.11□□□□□ -1.91
VPS33A-203ENST00000536212 CAMK2N1Q7Z7J9 78 aa3.11□□□□□ -1.91
VPS33A-203ENST00000536212 COL7A1Q02388 2944 aa3.1□□□□□ -1.91
VPS33A-203ENST00000536212 SRRM2Q9UQ35 2752 aaKnown RBP3.1□□□□□ -1.91
VPS33A-203ENST00000536212 CSMD3Q7Z407 3707 aa3.1□□□□□ -1.91
VPS33A-203ENST00000536212 ALMS1Q8TCU4 4167 aa3.1□□□□□ -1.91
VPS33A-203ENST00000536212 KRTAP10-4P60372 401 aaPredicted RBP3.09□□□□□ -1.91
VPS33A-203ENST00000536212 KRTAP21-3Q3LHN1 58 aa3.08□□□□□ -1.92
VPS33A-203ENST00000536212 HECTD4Q9Y4D8 3996 aa3.07□□□□□ -1.92
VPS33A-203ENST00000536212 DNAH11Q96DT5 4516 aa3.07□□□□□ -1.92
VPS33A-203ENST00000536212 A0A1B0GVY2 172 aa3.06□□□□□ -1.92
VPS33A-203ENST00000536212 FRAS1Q86XX4 4008 aa3.06□□□□□ -1.92
VPS33A-203ENST00000536212 KMT2AQ03164 3969 aa3.06□□□□□ -1.92
VPS33A-203ENST00000536212 SACSQ9NZJ4 4579 aa3.05□□□□□ -1.92
VPS33A-203ENST00000536212 DNAH5Q8TE73 4624 aa3.04□□□□□ -1.92
VPS33A-203ENST00000536212 P0C880 135 aa3.04□□□□□ -1.92
VPS33A-203ENST00000536212 C9orf92A6NGG3 77 aa3.03□□□□□ -1.92
VPS33A-203ENST00000536212 H0YAA0 97 aa3.02□□□□□ -1.93
VPS33A-203ENST00000536212 SMR3BP02814 79 aaPredicted RBP3.02□□□□□ -1.93
VPS33A-203ENST00000536212 COX6B2Q6YFQ2 88 aa3.02□□□□□ -1.93
VPS33A-203ENST00000536212 FBN3Q75N90 2809 aa3.01□□□□□ -1.93
VPS33A-203ENST00000536212 LRP1BQ9NZR2 4599 aa3.01□□□□□ -1.93
VPS33A-203ENST00000536212 A0A1B0GU33 70 aa3.01□□□□□ -1.93
VPS33A-203ENST00000536212 H1FX-AS1Q4G0G2 97 aa3.01□□□□□ -1.93
VPS33A-203ENST00000536212 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
VPS33A-203ENST00000536212 SPINT4Q6UDR6 99 aa2.99□□□□□ -1.93
VPS33A-203ENST00000536212 PKD1P98161 4303 aa2.97□□□□□ -1.93
VPS33A-203ENST00000536212 KRTAP10-8P60410 259 aa2.97□□□□□ -1.93
VPS33A-203ENST00000536212 FAT2Q9NYQ8 4349 aa2.97□□□□□ -1.93
VPS33A-203ENST00000536212 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
VPS33A-203ENST00000536212 MEGF8Q7Z7M0 2845 aa2.96□□□□□ -1.94
VPS33A-203ENST00000536212 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
VPS33A-203ENST00000536212 RPL37P61927 97 aaKnown RBP2.95□□□□□ -1.94
VPS33A-203ENST00000536212 PKHD1L1Q86WI1 4243 aa2.93□□□□□ -1.94
VPS33A-203ENST00000536212 VPS13BQ7Z7G8 4022 aa2.92□□□□□ -1.94
VPS33A-203ENST00000536212 TGP01266 2768 aa2.92□□□□□ -1.94
VPS33A-203ENST00000536212 HYDINQ4G0P3 5121 aa2.9□□□□□ -1.94
VPS33A-203ENST00000536212 DYNC1H1Q14204 4646 aaKnown RBP2.89□□□□□ -1.95
VPS33A-203ENST00000536212 FLG2Q5D862 2391 aaPredicted RBP2.88□□□□□ -1.95
VPS33A-203ENST00000536212 DNHD1Q96M86 4753 aa2.88□□□□□ -1.95
VPS33A-203ENST00000536212 PKHD1P08F94 4074 aa2.88□□□□□ -1.95
VPS33A-203ENST00000536212 KRTAP13-4Q3LI77 160 aa2.87□□□□□ -1.95
VPS33A-203ENST00000536212 Q5VSD8 79 aa2.87□□□□□ -1.95
VPS33A-203ENST00000536212 S4R3F8 94 aa2.87□□□□□ -1.95
VPS33A-203ENST00000536212 APOBP04114 4563 aaKnown RBP2.87□□□□□ -1.95
VPS33A-203ENST00000536212 MT1HL1P0DM35 61 aa2.85□□□□□ -1.95
VPS33A-203ENST00000536212 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
VPS33A-203ENST00000536212 CRIPTQ9P021 101 aa2.81□□□□□ -1.96
VPS33A-203ENST00000536212 A0A0D9SG42 100 aa2.8□□□□□ -1.96
VPS33A-203ENST00000536212 TPRXLQ17RH7 258 aa2.8□□□□□ -1.96
VPS33A-203ENST00000536212 KRTAP12-1P59990 96 aa2.79□□□□□ -1.96
VPS33A-203ENST00000536212 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
VPS33A-203ENST00000536212 FAT1Q14517 4588 aa2.79□□□□□ -1.96
VPS33A-203ENST00000536212 TNXBP22105 4242 aa2.79□□□□□ -1.96
VPS33A-203ENST00000536212 M0QZ58 72 aa2.78□□□□□ -1.96
VPS33A-203ENST00000536212 FAT3Q8TDW7 4589 aa2.78□□□□□ -1.96
VPS33A-203ENST00000536212 KRTAP12-2P59991 146 aa2.77□□□□□ -1.97
VPS33A-203ENST00000536212 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
VPS33A-203ENST00000536212 LRP1Q07954 4544 aaKnown RBP2.76□□□□□ -1.97
VPS33A-203ENST00000536212 KRTAP10-12P60413 245 aa2.75□□□□□ -1.97
VPS33A-203ENST00000536212 PRO2289Q9P1D8 64 aa2.75□□□□□ -1.97
VPS33A-203ENST00000536212 RYR2Q92736 4967 aa2.73□□□□□ -1.97
VPS33A-203ENST00000536212 HSPG2P98160 4391 aa2.73□□□□□ -1.97
VPS33A-203ENST00000536212 PLAC4Q8WY50 150 aa2.72□□□□□ -1.97
VPS33A-203ENST00000536212 C10orf95Q9H7T3 257 aa2.72□□□□□ -1.97
VPS33A-203ENST00000536212 DMBT1Q9UGM3 2413 aaPredicted RBP2.68□□□□□ -1.98
VPS33A-203ENST00000536212 RYR1P21817 5038 aa2.66□□□□□ -1.98
VPS33A-203ENST00000536212 INE1O15225 51 aa2.66□□□□□ -1.98
VPS33A-203ENST00000536212 MYCBP2O75592 4640 aa2.65□□□□□ -1.98
VPS33A-203ENST00000536212 KRTAP19-2Q3LHN2 52 aa2.65□□□□□ -1.99
VPS33A-203ENST00000536212 KRTAP4-1Q9BYQ7 146 aa2.65□□□□□ -1.99
VPS33A-203ENST00000536212 R4GN34 69 aa2.64□□□□□ -1.99
VPS33A-203ENST00000536212 LCE3CQ5T5A8 94 aa2.6□□□□□ -1.99
VPS33A-203ENST00000536212 KMT2CQ8NEZ4 4911 aaKnown RBP2.58□□□□□ -2
VPS33A-203ENST00000536212 PP632Q6XCG6 107 aa2.56□□□□□ -2
VPS33A-203ENST00000536212 KIAA1109Q2LD37 5005 aa2.54□□□□□ -2
VPS33A-203ENST00000536212 LRP2P98164 4655 aa2.53□□□□□ -2
VPS33A-203ENST00000536212 LPAP08519 4548 aa2.52□□□□□ -2.01
VPS33A-203ENST00000536212 RYR3Q15413 4870 aa2.52□□□□□ -2.01
VPS33A-203ENST00000536212 MUC17Q685J3 4493 aa2.51□□□□□ -2.01
VPS33A-203ENST00000536212 LCE3AQ5TA76 89 aa2.49□□□□□ -2.01
VPS33A-203ENST00000536212 TNP1P09430 55 aa2.46□□□□□ -2.02
VPS33A-203ENST00000536212 SPRR2GQ9BYE4 73 aa2.44□□□□□ -2.02
VPS33A-203ENST00000536212 SPRR5A0A1B0GTR4 108 aa2.42□□□□□ -2.02
VPS33A-203ENST00000536212 EPPK1P58107 5090 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms