RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 HECTD1Q9ULT8 2610 aa2.33□□□□□ -2.04
ECHDC1-222ENST00000531967 A0A1B0GVY2 172 aa2.33□□□□□ -2.04
ECHDC1-222ENST00000531967 CMYA5Q8N3K9 4069 aa2.33□□□□□ -2.04
ECHDC1-222ENST00000531967 TENM3Q9P273 2699 aa2.32□□□□□ -2.04
ECHDC1-222ENST00000531967 PRLHP81277 87 aa2.32□□□□□ -2.04
ECHDC1-222ENST00000531967 KRTAP13-1Q8IUC0 172 aa2.32□□□□□ -2.04
ECHDC1-222ENST00000531967 DNAH1Q9P2D7 4330 aa2.3□□□□□ -2.04
ECHDC1-222ENST00000531967 A0A096LNI7 61 aa2.3□□□□□ -2.04
ECHDC1-222ENST00000531967 MAST4O15021 2626 aa2.29□□□□□ -2.04
ECHDC1-222ENST00000531967 FLNBO75369 2602 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-222ENST00000531967 KRTAP12-1P59990 96 aa2.28□□□□□ -2.04
ECHDC1-222ENST00000531967 STAB1Q9NY15 2570 aa2.28□□□□□ -2.04
ECHDC1-222ENST00000531967 KRTAP5-4Q6L8H1 288 aa2.28□□□□□ -2.04
ECHDC1-222ENST00000531967 K7EIL1 84 aa2.27□□□□□ -2.05
ECHDC1-222ENST00000531967 F8P00451 2351 aa2.27□□□□□ -2.05
ECHDC1-222ENST00000531967 NOTCH1P46531 2555 aa2.26□□□□□ -2.05
ECHDC1-222ENST00000531967 LYSTQ99698 3801 aa2.26□□□□□ -2.05
ECHDC1-222ENST00000531967 NBEAL1Q6ZS30 2694 aa2.26□□□□□ -2.05
ECHDC1-222ENST00000531967 FBN1P35555 2871 aaKnown RBP2.26□□□□□ -2.05
ECHDC1-222ENST00000531967 LCE1EQ5T753 118 aa2.26□□□□□ -2.05
ECHDC1-222ENST00000531967 HUWE1Q7Z6Z7 4374 aaKnown RBP2.25□□□□□ -2.05
ECHDC1-222ENST00000531967 APLNQ9ULZ1 77 aa2.25□□□□□ -2.05
ECHDC1-222ENST00000531967 DNAH10Q8IVF4 4471 aa2.24□□□□□ -2.05
ECHDC1-222ENST00000531967 SPINK1P00995 79 aa2.24□□□□□ -2.05
ECHDC1-222ENST00000531967 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
ECHDC1-222ENST00000531967 DYNC2H1Q8NCM8 4307 aaKnown RBP2.24□□□□□ -2.05
ECHDC1-222ENST00000531967 COL6A5A8TX70 2615 aa2.23□□□□□ -2.05
ECHDC1-222ENST00000531967 STAB2Q8WWQ8 2551 aa2.23□□□□□ -2.05
ECHDC1-222ENST00000531967 DNAH9Q9NYC9 4486 aa2.22□□□□□ -2.05
ECHDC1-222ENST00000531967 COL7A1Q02388 2944 aa2.22□□□□□ -2.05
ECHDC1-222ENST00000531967 KRTAP10-10P60014 251 aa2.22□□□□□ -2.05
ECHDC1-222ENST00000531967 SRRM2Q9UQ35 2752 aaKnown RBP2.22□□□□□ -2.05
ECHDC1-222ENST00000531967 HECTD4Q9Y4D8 3996 aa2.21□□□□□ -2.06
ECHDC1-222ENST00000531967 DNAH7Q8WXX0 4024 aa2.21□□□□□ -2.06
ECHDC1-222ENST00000531967 CSMD3Q7Z407 3707 aa2.21□□□□□ -2.06
ECHDC1-222ENST00000531967 MGAM2Q2M2H8 2515 aa2.2□□□□□ -2.06
ECHDC1-222ENST00000531967 PLECQ15149 4684 aaKnown RBP2.19□□□□□ -2.06
ECHDC1-222ENST00000531967 KRTAP21-3Q3LHN1 58 aa2.18□□□□□ -2.06
ECHDC1-222ENST00000531967 S4R3F8 94 aa2.18□□□□□ -2.06
ECHDC1-222ENST00000531967 KRTAP10-7P60409 375 aaPredicted RBP2.17□□□□□ -2.06
ECHDC1-222ENST00000531967 KRTAP6-3Q3LI67 103 aa2.17□□□□□ -2.06
ECHDC1-222ENST00000531967 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
ECHDC1-222ENST00000531967 SPINK6Q6UWN8 80 aa2.16□□□□□ -2.06
ECHDC1-222ENST00000531967 PRKDCP78527 4128 aaKnown RBP2.16□□□□□ -2.06
ECHDC1-222ENST00000531967 VPS13DQ5THJ4 4388 aa2.16□□□□□ -2.06
ECHDC1-222ENST00000531967 STARD9Q9P2P6 4700 aa2.15□□□□□ -2.07
ECHDC1-222ENST00000531967 FRAS1Q86XX4 4008 aa2.15□□□□□ -2.07
ECHDC1-222ENST00000531967 DNAH17Q9UFH2 4485 aa2.13□□□□□ -2.07
ECHDC1-222ENST00000531967 A0A0D9SG42 100 aa2.13□□□□□ -2.07
ECHDC1-222ENST00000531967 DNAH8Q96JB1 4490 aa2.13□□□□□ -2.07
ECHDC1-222ENST00000531967 KRTAP4-3Q9BYR4 195 aa2.12□□□□□ -2.07
ECHDC1-222ENST00000531967 KMT2AQ03164 3969 aa2.12□□□□□ -2.07
ECHDC1-222ENST00000531967 MEGF8Q7Z7M0 2845 aa2.12□□□□□ -2.07
ECHDC1-222ENST00000531967 FBN3Q75N90 2809 aa2.12□□□□□ -2.07
ECHDC1-222ENST00000531967 DNAH2Q9P225 4427 aa2.11□□□□□ -2.07
ECHDC1-222ENST00000531967 DNAH6Q9C0G6 4158 aa2.1□□□□□ -2.07
ECHDC1-222ENST00000531967 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
ECHDC1-222ENST00000531967 RPS29P62273 56 aaKnown RBP2.1□□□□□ -2.07
ECHDC1-222ENST00000531967 TGP01266 2768 aa2.1□□□□□ -2.07
ECHDC1-222ENST00000531967 KRTAP5-5Q701N2 237 aaPredicted RBP2.08□□□□□ -2.08
ECHDC1-222ENST00000531967 DNAH11Q96DT5 4516 aa2.08□□□□□ -2.08
ECHDC1-222ENST00000531967 DNAH5Q8TE73 4624 aa2.08□□□□□ -2.08
ECHDC1-222ENST00000531967 KRTAP12-4P60329 112 aa2.06□□□□□ -2.08
ECHDC1-222ENST00000531967 KRTAP5-2Q701N4 177 aa2.06□□□□□ -2.08
ECHDC1-222ENST00000531967 LCE3DQ9BYE3 92 aa2.05□□□□□ -2.08
ECHDC1-222ENST00000531967 PKD1P98161 4303 aa2.05□□□□□ -2.08
ECHDC1-222ENST00000531967 Q5VSD8 79 aa2.04□□□□□ -2.08
ECHDC1-222ENST00000531967 VPS13BQ7Z7G8 4022 aa2.04□□□□□ -2.08
ECHDC1-222ENST00000531967 LRP1BQ9NZR2 4599 aa2.02□□□□□ -2.09
ECHDC1-222ENST00000531967 KRTAP10-5P60370 271 aa2.02□□□□□ -2.09
ECHDC1-222ENST00000531967 FAT2Q9NYQ8 4349 aa2.01□□□□□ -2.09
ECHDC1-222ENST00000531967 DNHD1Q96M86 4753 aa1.98□□□□□ -2.09
ECHDC1-222ENST00000531967 SACSQ9NZJ4 4579 aa1.98□□□□□ -2.09
ECHDC1-222ENST00000531967 HYDINQ4G0P3 5121 aa1.98□□□□□ -2.09
ECHDC1-222ENST00000531967 M0QZ58 72 aa1.98□□□□□ -2.09
ECHDC1-222ENST00000531967 APOBP04114 4563 aaKnown RBP1.96□□□□□ -2.1
ECHDC1-222ENST00000531967 C9orf92A6NGG3 77 aa1.96□□□□□ -2.1
ECHDC1-222ENST00000531967 PKHD1P08F94 4074 aa1.95□□□□□ -2.1
ECHDC1-222ENST00000531967 PKHD1L1Q86WI1 4243 aa1.95□□□□□ -2.1
ECHDC1-222ENST00000531967 KRTAP10-4P60372 401 aaPredicted RBP1.94□□□□□ -2.1
ECHDC1-222ENST00000531967 SMR3BP02814 79 aaPredicted RBP1.93□□□□□ -2.1
ECHDC1-222ENST00000531967 DYNC1H1Q14204 4646 aaKnown RBP1.93□□□□□ -2.1
ECHDC1-222ENST00000531967 KRTAP5-1Q6L8H4 278 aa1.92□□□□□ -2.1
ECHDC1-222ENST00000531967 FAT1Q14517 4588 aa1.89□□□□□ -2.11
ECHDC1-222ENST00000531967 FAT3Q8TDW7 4589 aa1.88□□□□□ -2.11
ECHDC1-222ENST00000531967 TNXBP22105 4242 aa1.88□□□□□ -2.11
ECHDC1-222ENST00000531967 DMBT1Q9UGM3 2413 aaPredicted RBP1.87□□□□□ -2.11
ECHDC1-222ENST00000531967 KRTAP12-3P60328 96 aa1.85□□□□□ -2.11
ECHDC1-222ENST00000531967 HSPG2P98160 4391 aa1.85□□□□□ -2.11
ECHDC1-222ENST00000531967 RYR2Q92736 4967 aa1.85□□□□□ -2.11
ECHDC1-222ENST00000531967 LRP1Q07954 4544 aaKnown RBP1.84□□□□□ -2.11
ECHDC1-222ENST00000531967 MYCBP2O75592 4640 aa1.83□□□□□ -2.12
ECHDC1-222ENST00000531967 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
ECHDC1-222ENST00000531967 KMT2CQ8NEZ4 4911 aaKnown RBP1.81□□□□□ -2.12
ECHDC1-222ENST00000531967 RYR1P21817 5038 aa1.8□□□□□ -2.12
ECHDC1-222ENST00000531967 MT1HL1P0DM35 61 aa1.79□□□□□ -2.12
ECHDC1-222ENST00000531967 BIRC6Q9NR09 4857 aa1.78□□□□□ -2.12
ECHDC1-222ENST00000531967 GPR98Q8WXG9 6306 aa1.78□□□□□ -2.12
ECHDC1-222ENST00000531967 PCLOQ9Y6V0 5065 aa1.75□□□□□ -2.13
ECHDC1-222ENST00000531967 TNP1P09430 55 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms